RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-215	ENST00000552555	TNKS	O95271	1327 aa		12.02	□□□□□ -0.49
DDX23-215	ENST00000552555	DDAH1	O94760	285 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	FMNL1	O95466	1100 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	CALM1	P0DP23	149 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	CALM2	P0DP24	149 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	CALM3	P0DP25	149 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	MRE11	P49959	708 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	GTF2I	P78347	998 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	HDLBP	Q00341	1268 aa	Known RBP	12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	CCDC178	Q5BJE1	867 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	RRP12	Q5JTH9	1297 aa	Known RBP	12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	CAVIN1	Q6NZI2	390 aa	Known RBP	12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	HHIPL2	Q6UWX4	724 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	NFXL1	Q6ZNB6	911 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	NBPF11	Q86T75	865 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	FERMT3	Q86UX7	667 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	ZNF654	Q8IZM8	581 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	CERS5	Q8N5B7	392 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	FANCB	Q8NB91	859 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	SYAP1	Q96A49	352 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	C8orf76	Q96K31	380 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	MAP3K14	Q99558	947 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	MCM9	Q9NXL9	1143 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	CFAP45	Q9UL16	551 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	TAOK2	Q9UL54	1235 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	DAGLA	Q9Y4D2	1042 aa		12.01	□□□□□ -0.49
DDX23-215	ENST00000552555	DDX60L	Q5H9U9	1706 aa	Known RBP	12	□□□□□ -0.49
DDX23-215	ENST00000552555	LAMB1	P07942	1786 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	FIBP	O43427	364 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	RANBP6	O60518	1105 aa	Known RBP	12	□□□□□ -0.49
DDX23-215	ENST00000552555	USP17L8	P0C7I0	530 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	CYP2D6	P10635	497 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	IARS	P41252	1262 aa	Known RBP	12	□□□□□ -0.49
DDX23-215	ENST00000552555	USP5	P45974	858 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	NOV	P48745	357 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	FUT2	Q10981	343 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	TROAP	Q12815	778 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	RTN1	Q16799	776 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	STRIP1	Q5VSL9	837 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	OLFM4	Q6UX06	510 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	BRAP	Q7Z569	592 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	MICU3	Q86XE3	530 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	GAS2L3	Q86XJ1	694 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	DGKH	Q86XP1	1220 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	SUPT20H	Q8NEM7	779 aa		12	□□□□□ -0.49
DDX23-215	ENST00000552555	LEO1	Q8WVC0	666 aa	Predicted RBP	12	□□□□□ -0.49
DDX23-215	ENST00000552555	RBM28	Q9NW13	759 aa	Known RBP	12	□□□□□ -0.49
DDX23-215	ENST00000552555	RIMBP2	O15034	1052 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	LETM1	O95202	739 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	KIAA2012	Q0VF49	1180 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	RCSD1	Q6JBY9	416 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	FAM173B	Q6P4H8	233 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	C16orf86	Q6ZW13	317 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	DEFB132	Q7Z7B7	95 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	AMOTL1	Q8IY63	956 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	TGFBRAP1	Q8WUH2	860 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	WASF1	Q92558	559 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	ZNF396	Q96N95	335 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	ALG1	Q9BT22	464 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	RNF26	Q9BY78	433 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	VPS33B	Q9H267	617 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	ZNF287	Q9HBT7	754 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	TOMM22	Q9NS69	142 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	FLT1	P17948	1338 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	CHD4	Q14839	1912 aa		11.99	□□□□□ -0.49
DDX23-215	ENST00000552555	DLEC1	Q9Y238	1755 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	NPM3	O75607	178 aa	Known RBP	11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	U2AF2	P26368	475 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	CHRNA5	P30532	468 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	KIF23	Q02241	960 aa	Predicted RBP	11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	EVX2	Q03828	476 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	SSRP1	Q08945	709 aa	Known RBP	11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	DACT2	Q5SW24	774 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	CCDC183	Q5T5S1	534 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	IFIT1B	Q5T764	474 aa	Known RBP	11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	CATIP	Q7Z7H3	387 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	TEX11	Q8IYF3	940 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	SPATA32	Q96LK8	384 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	ZKSCAN3	Q9BRR0	538 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	RTEL1	Q9NZ71	1219 aa		11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	RBM27	Q9P2N5	1060 aa	Known RBP	11.98	□□□□□ -0.49
DDX23-215	ENST00000552555	MYO3B	Q8WXR4	1341 aa		11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	PRDM1	O75626	825 aa		11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	WDHD1	O75717	1129 aa	Predicted RBP	11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	DEXI	O95424	95 aa		11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	XRCC6	P12956	609 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	RXRA	P19793	462 aa		11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	KCNA3	P22001	575 aa		11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	NASP	P49321	788 aa	Predicted RBP	11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	PLCD1	P51178	756 aa		11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	GABPA	Q06546	454 aa		11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	DOK7	Q18PE1	504 aa		11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	KRT40	Q6A162	431 aa		11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.97	□□□□□ -0.49
DDX23-215	ENST00000552555	LRSAM1	Q6UWE0	723 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms