RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 PDE4BQ07343 736 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 MICU3Q86XE3 530 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 CHAMP1Q96JM3 812 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 SPON1Q9HCB6 807 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 HPS5Q9UPZ3 1129 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 ZNF646O15015 1829 aaPredicted RBP12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 CCDC69A6NI79 296 aa12.96□□□□□ -0.33
SLC38A1-210ENST00000552197 STX6O43752 255 aa12.96□□□□□ -0.33
SLC38A1-210ENST00000552197 CTDNEP1O95476 244 aa12.96□□□□□ -0.33
SLC38A1-210ENST00000552197 BRD1O95696 1058 aa12.96□□□□□ -0.33
SLC38A1-210ENST00000552197 CACNB3P54284 484 aa12.96□□□□□ -0.33
SLC38A1-210ENST00000552197 WTAPQ15007 396 aa12.96□□□□□ -0.33
SLC38A1-210ENST00000552197 LARP1BQ659C4 914 aaKnown RBP12.96□□□□□ -0.33
SLC38A1-210ENST00000552197 SLC44A5Q8NCS7 719 aa12.96□□□□□ -0.33
SLC38A1-210ENST00000552197 NFKBIEO00221 500 aa12.96□□□□□ -0.34
SLC38A1-210ENST00000552197 FGRP09769 529 aa12.96□□□□□ -0.34
SLC38A1-210ENST00000552197 MCM4P33991 863 aa12.96□□□□□ -0.34
SLC38A1-210ENST00000552197 MKNK2Q9HBH9 465 aa12.96□□□□□ -0.34
SLC38A1-210ENST00000552197 DDX4Q9NQI0 724 aaKnown RBP12.96□□□□□ -0.34
SLC38A1-210ENST00000552197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.34
SLC38A1-210ENST00000552197 SLC12A7Q9Y666 1083 aa12.96□□□□□ -0.34
SLC38A1-210ENST00000552197 TNKSO95271 1327 aa12.96□□□□□ -0.34
SLC38A1-210ENST00000552197 VPS37CA5D8V6 355 aaPredicted RBP12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 TSPY2A6NKD2 308 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 NMT2O60551 498 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 APOA5Q6Q788 366 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 ILDR2Q71H61 639 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 NSUN7Q8NE18 718 aaKnown RBP12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 ZDHHC15Q96MV8 337 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 FER1L6Q2WGJ9 1857 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 PTPDC1A2A3K4 754 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 ZBTB43O43298 467 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 PCP11498 1178 aaKnown RBP12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 LIFRP42702 1097 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 FOSBP53539 338 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 NFIAQ12857 509 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 RSBN1LQ6PCB5 846 aaPredicted RBP12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 IQCA1Q86XH1 822 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 FAM184AQ8NB25 1140 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 JDP2Q8WYK2 163 aa12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 ZSCAN10Q96SZ4 725 aaPredicted RBP12.95□□□□□ -0.34
SLC38A1-210ENST00000552197 ORC4O43929 436 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 ADD1P35611 737 aaKnown RBP12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 RASSF7Q02833 373 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 SGMS1Q86VZ5 419 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 VPS33BQ9H267 617 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 CPLX1O14810 134 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 BAG4O95429 457 aaKnown RBP12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 TCP10Q12799 353 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 CFAP100Q494V2 611 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 SYNE3Q6ZMZ3 975 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 ENAHQ8N8S7 591 aaPredicted RBP12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 LLPHQ9BRT6 129 aaKnown RBP12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 SERPINA10Q9UK55 444 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 TAOK2Q9UL54 1235 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 FOCADQ5VW36 1801 aa12.94□□□□□ -0.34
SLC38A1-210ENST00000552197 VIL1P09327 827 aaKnown RBP12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 ZSCAN22P10073 491 aaPredicted RBP12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 HDLBPQ00341 1268 aaKnown RBP12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 TFAP4Q01664 338 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 ZNF444Q8N0Y2 327 aaPredicted RBP12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 PSME4Q14997 1843 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 GOLGA8AA7E2F4 631 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 DHX16O60231 1041 aaKnown RBP12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 CDC27P30260 824 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 CXCL9Q07325 125 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 SEC23AQ15436 765 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 IFIT1BQ5T764 474 aaKnown RBP12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 ZFPM1Q8IX07 1006 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 MTMR6Q9Y217 621 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 ECM29Q5VYK3 1845 aa12.93□□□□□ -0.34
SLC38A1-210ENST00000552197 CDK8P49336 464 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 TMTC2Q8N394 836 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 FHDC1Q9C0D6 1143 aaPredicted RBP12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 TSPY3P0CV98 308 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 TSPY8P0CW00 308 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 PDCP20941 246 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 CDC37L1Q7L3B6 337 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 FERMT3Q86UX7 667 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 OSBPL5Q9H0X9 879 aaPredicted RBP12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 MYO3BQ8WXR4 1341 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
SLC38A1-210ENST00000552197 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms