RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 ZSCAN12O43309 604 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 ATP8B1O43520 1251 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 IGSF3O75054 1194 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 PTCD1O75127 700 aaKnown RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 ZNF202O95125 648 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 BMP15O95972 392 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 FDPSP14324 419 aaKnown RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 IL2RBP14784 551 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 GTF2E1P29083 439 aaPredicted RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 ARID4AP29374 1257 aaPredicted RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 ADD2P35612 726 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 CCT2P78371 535 aaKnown RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 MYL5Q02045 173 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 KIF23Q02241 960 aaPredicted RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 ATP2B3Q16720 1220 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 NBPF14Q5TI25 921 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 NBPF10Q6P3W6 841 aaKnown RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 OLFM4Q6UX06 510 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 TMTC2Q8N394 836 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 NBPF15Q8N660 670 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 AOPEPQ8N6M6 819 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 DDX54Q8TDD1 881 aaKnown RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 XAGE2Q96GT9 111 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 PYM1Q9BRP8 204 aaKnown RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 GOLPH3LQ9H4A5 285 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 L2HGDHQ9H9P8 463 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 ARGLU1Q9NWB6 273 aaPredicted RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 CEP131Q9UPN4 1083 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 IQSEC3Q9UPP2 1182 aaPredicted RBP6.2□□□□□ -1.42
CCNT1-204ENST00000551989 HPSEQ9Y251 543 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 SCN7AQ01118 1682 aa6.2□□□□□ -1.42
CCNT1-204ENST00000551989 RTL9Q8NET4 1388 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 ANKRD18BA2A2Z9 1011 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 ERVV-1B6SEH8 477 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 SH2B2O14492 632 aaPredicted RBP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 GPAA1O43292 621 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 STARD3NLO95772 234 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 FGAP02671 866 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 PCP11498 1178 aaKnown RBP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 U2AF2P26368 475 aaKnown RBP eCLIP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 SYKP43405 635 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 METAP2P50579 478 aaKnown RBP eCLIP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 LRMPQ12912 555 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 SEMA3FQ13275 785 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 TUBB2AQ13885 445 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 SART3Q15020 963 aaKnown RBP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 SAFBQ15424 915 aaKnown RBP eCLIP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 WASHC4Q2M389 1173 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 CCDC144BQ3MJ40 725 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 RILPL1Q5EBL4 403 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 GIGYF2Q6Y7W6 1299 aaKnown RBP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 FILIP1Q7Z7B0 1213 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 CCDC144CPQ8IYA2 1237 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 KRT222Q8N1A0 295 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 C17orf53Q8N3J3 647 aaPredicted RBP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 OSBP2Q969R2 916 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 TUBB2BQ9BVA1 445 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 KRT23Q9C075 422 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 RNF41Q9H4P4 317 aaPredicted RBP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 DDX41Q9UJV9 622 aaKnown RBP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 NEDD4P46934 1319 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 SOS2Q07890 1332 aaPredicted RBP6.19□□□□□ -1.42
CCNT1-204ENST00000551989 MROH5Q6ZUA9 1318 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 MYH8P13535 1937 aa6.19□□□□□ -1.42
CCNT1-204ENST00000551989 DUOX1Q9NRD9 1551 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 ROBO1Q9Y6N7 1651 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 SEMA3EO15041 775 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 ARHGAP6O43182 974 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 ZBTB43O43298 467 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 PFKFB1P16118 471 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 ZSCAN20P17040 1043 aaPredicted RBP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 IFNAR1P17181 557 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 XBP1P17861 261 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 IARSP41252 1262 aaKnown RBP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 NDUFA8P51970 172 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 ANTXR2P58335 489 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 TIMM10P62072 90 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 FKBP4Q02790 459 aaKnown RBP eCLIP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 GNL2Q13823 731 aaKnown RBP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 BMS1Q14692 1282 aaKnown RBP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 LRRC24Q50LG9 513 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 METTL24Q5JXM2 366 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 AXDND1Q5T1B0 1012 aaPredicted RBP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 RESP18Q5W5W9 173 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 CCDC102BQ68D86 513 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 APOA5Q6Q788 366 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 TTLL7Q6ZT98 887 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 TOM1L2Q6ZVM7 507 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 VPS37DQ86XT2 251 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 TRIM22Q8IYM9 498 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 MPHOSPH8Q99549 860 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 ALG1Q9BT22 464 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 NAA15Q9BXJ9 866 aaKnown RBP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 LRRC2Q9BYS8 371 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 NACAP1Q9BZK3 213 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 FOXP1Q9H334 677 aaPredicted RBP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 PRDM11Q9NQV5 511 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 WBP1LQ9NX94 342 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 TMOD3Q9NYL9 352 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 NRBP1Q9UHY1 535 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms