RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PDE3AQ14432 1141 aa19.06■□□□□ 0.64
CACNB3-220ENST00000551716 SPTY2D1Q68D10 685 aaPredicted RBP19.06■□□□□ 0.64
CACNB3-220ENST00000551716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.06■□□□□ 0.64
CACNB3-220ENST00000551716 AS3MTQ9HBK9 375 aa19.06■□□□□ 0.64
CACNB3-220ENST00000551716 MAP4K4O95819 1239 aaPredicted RBP19.05■□□□□ 0.64
CACNB3-220ENST00000551716 ZKSCAN1P17029 563 aaPredicted RBP19.05■□□□□ 0.64
CACNB3-220ENST00000551716 MAPK4P31152 587 aa19.05■□□□□ 0.64
CACNB3-220ENST00000551716 HMGCS2P54868 508 aa19.05■□□□□ 0.64
CACNB3-220ENST00000551716 LRRC26Q2I0M4 334 aa19.05■□□□□ 0.64
CACNB3-220ENST00000551716 SH3D19Q5HYK7 790 aa19.05■□□□□ 0.64
CACNB3-220ENST00000551716 DZIP1Q86YF9 867 aaKnown RBP19.05■□□□□ 0.64
CACNB3-220ENST00000551716 GPRC5AQ8NFJ5 357 aa19.05■□□□□ 0.64
CACNB3-220ENST00000551716 CEP126Q9P2H0 1117 aa19.05■□□□□ 0.64
CACNB3-220ENST00000551716 PRKAG2Q9UGJ0 569 aa19.05■□□□□ 0.64
CACNB3-220ENST00000551716 DOCK3Q8IZD9 2030 aa19.05■□□□□ 0.64
CACNB3-220ENST00000551716 USP17L5A8MUK1 530 aa19.04■□□□□ 0.64
CACNB3-220ENST00000551716 IRX3P78415 501 aaPredicted RBP19.04■□□□□ 0.64
CACNB3-220ENST00000551716 PICALMQ13492 652 aa19.04■□□□□ 0.64
CACNB3-220ENST00000551716 ATP2B3Q16720 1220 aa19.04■□□□□ 0.64
CACNB3-220ENST00000551716 CCAR1Q8IX12 1150 aaKnown RBP19.04■□□□□ 0.64
CACNB3-220ENST00000551716 FAM161BQ96MY7 647 aa19.04■□□□□ 0.64
CACNB3-220ENST00000551716 HOXA7P31268 230 aaPredicted RBP19.03■□□□□ 0.64
CACNB3-220ENST00000551716 CACNB2Q08289 660 aaPredicted RBP19.03■□□□□ 0.64
CACNB3-220ENST00000551716 LHX8Q68G74 356 aa19.03■□□□□ 0.64
CACNB3-220ENST00000551716 CCDC84Q86UT8 332 aaPredicted RBP19.03■□□□□ 0.64
CACNB3-220ENST00000551716 CDX2Q99626 313 aaPredicted RBP19.03■□□□□ 0.64
CACNB3-220ENST00000551716 RFX7Q2KHR2 1363 aa19.03■□□□□ 0.64
CACNB3-220ENST00000551716 DDX60LQ5H9U9 1706 aaKnown RBP19.03■□□□□ 0.64
CACNB3-220ENST00000551716 CIAO1O76071 339 aa19.02■□□□□ 0.64
CACNB3-220ENST00000551716 CAP2P40123 477 aa19.02■□□□□ 0.64
CACNB3-220ENST00000551716 RGS2P41220 211 aa19.02■□□□□ 0.64
CACNB3-220ENST00000551716 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.64
CACNB3-220ENST00000551716 MAFAQ8NHW3 353 aaPredicted RBP19.02■□□□□ 0.64
CACNB3-220ENST00000551716 DDX4Q9NQI0 724 aaKnown RBP19.02■□□□□ 0.64
CACNB3-220ENST00000551716 TMOD4Q9NZQ9 345 aa19.02■□□□□ 0.64
CACNB3-220ENST00000551716 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.02■□□□□ 0.64
CACNB3-220ENST00000551716 VCANP13611 3396 aa19.02■□□□□ 0.63
CACNB3-220ENST00000551716 BTDP43251 543 aa19.01■□□□□ 0.63
CACNB3-220ENST00000551716 RFX5P48382 616 aaPredicted RBP19.01■□□□□ 0.63
CACNB3-220ENST00000551716 GTF3C2Q8WUA4 911 aaPredicted RBP19.01■□□□□ 0.63
CACNB3-220ENST00000551716 USP44Q9H0E7 712 aa19.01■□□□□ 0.63
CACNB3-220ENST00000551716 SEMA6BQ9H3T3 888 aa19.01■□□□□ 0.63
CACNB3-220ENST00000551716 ABCF2Q9UG63 623 aa19.01■□□□□ 0.63
CACNB3-220ENST00000551716 COL2A1P02458 1487 aaPredicted RBP19.01■□□□□ 0.63
CACNB3-220ENST00000551716 PDS5AQ29RF7 1337 aaKnown RBP19■□□□□ 0.63
CACNB3-220ENST00000551716 GPR75-ASB3A0A0A6YYF3 556 aa19■□□□□ 0.63
CACNB3-220ENST00000551716 SLURP2P0DP57 97 aa19■□□□□ 0.63
CACNB3-220ENST00000551716 USP6NLQ92738 828 aa19■□□□□ 0.63
CACNB3-220ENST00000551716 P2RX7Q99572 595 aaKnown RBP19■□□□□ 0.63
CACNB3-220ENST00000551716 WDR18Q9BV38 432 aa19■□□□□ 0.63
CACNB3-220ENST00000551716 SENP6Q9GZR1 1112 aaPredicted RBP19■□□□□ 0.63
CACNB3-220ENST00000551716 SALL2Q9Y467 1007 aaPredicted RBP19■□□□□ 0.63
CACNB3-220ENST00000551716 C19orf81C9J6K1 198 aa18.99■□□□□ 0.63
CACNB3-220ENST00000551716 MSCO60682 206 aa18.99■□□□□ 0.63
CACNB3-220ENST00000551716 LDHCP07864 332 aa18.99■□□□□ 0.63
CACNB3-220ENST00000551716 CCND3P30281 292 aaPredicted RBP18.99■□□□□ 0.63
CACNB3-220ENST00000551716 PHKA1P46020 1223 aa18.99■□□□□ 0.63
CACNB3-220ENST00000551716 BACE1P56817 501 aa18.99■□□□□ 0.63
CACNB3-220ENST00000551716 HERC5Q9UII4 1024 aaKnown RBP18.99■□□□□ 0.63
CACNB3-220ENST00000551716 MROH7-TTC4A0A0A0MT08 1334 aa18.99■□□□□ 0.63
CACNB3-220ENST00000551716 PTPRCP08575 1304 aa18.99■□□□□ 0.63
CACNB3-220ENST00000551716 PTPRFP10586 1907 aa18.98■□□□□ 0.63
CACNB3-220ENST00000551716 DOCK2Q92608 1830 aa18.98■□□□□ 0.63
CACNB3-220ENST00000551716 GLRX3O76003 335 aaKnown RBP18.98■□□□□ 0.63
CACNB3-220ENST00000551716 HERVK_113P62684 666 aa18.98■□□□□ 0.63
CACNB3-220ENST00000551716 GSTO1P78417 241 aa18.98■□□□□ 0.63
CACNB3-220ENST00000551716 MFSD14CQ5VZR4 134 aa18.98■□□□□ 0.63
CACNB3-220ENST00000551716 CCDC102BQ68D86 513 aa18.98■□□□□ 0.63
CACNB3-220ENST00000551716 APBA2Q99767 749 aa18.98■□□□□ 0.63
CACNB3-220ENST00000551716 DOCK1Q14185 1865 aa18.98■□□□□ 0.63
CACNB3-220ENST00000551716 ASNSP08243 561 aa18.97■□□□□ 0.63
CACNB3-220ENST00000551716 IL15P40933 162 aaPredicted RBP18.97■□□□□ 0.63
CACNB3-220ENST00000551716 RHBDL3P58872 404 aa18.97■□□□□ 0.63
CACNB3-220ENST00000551716 MORN1Q5T089 497 aa18.97■□□□□ 0.63
CACNB3-220ENST00000551716 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
CACNB3-220ENST00000551716 PLEKHH3Q7Z736 793 aa18.97■□□□□ 0.63
CACNB3-220ENST00000551716 CWC22Q9HCG8 908 aaKnown RBP18.97■□□□□ 0.63
CACNB3-220ENST00000551716 GINM1Q9NU53 330 aa18.97■□□□□ 0.63
CACNB3-220ENST00000551716 RBPJLQ9UBG7 517 aa18.97■□□□□ 0.63
CACNB3-220ENST00000551716 TTC28Q96AY4 2481 aa18.96■□□□□ 0.63
CACNB3-220ENST00000551716 PHIPQ8WWQ0 1821 aa18.96■□□□□ 0.63
CACNB3-220ENST00000551716 FAM196BA6NMK8 535 aa18.96■□□□□ 0.63
CACNB3-220ENST00000551716 ERVK-9P63128 1117 aa18.96■□□□□ 0.63
CACNB3-220ENST00000551716 ERVK-24P63145 666 aa18.96■□□□□ 0.63
CACNB3-220ENST00000551716 SMAD3P84022 425 aaKnown RBP18.96■□□□□ 0.63
CACNB3-220ENST00000551716 MTMR2Q13614 643 aa18.96■□□□□ 0.63
CACNB3-220ENST00000551716 GPR142Q7Z601 462 aa18.96■□□□□ 0.63
CACNB3-220ENST00000551716 TXNRD2Q9NNW7 524 aa18.96■□□□□ 0.63
CACNB3-220ENST00000551716 PI4KBQ9UBF8 816 aa18.96■□□□□ 0.63
CACNB3-220ENST00000551716 DNM1LO00429 736 aa18.95■□□□□ 0.62
CACNB3-220ENST00000551716 MECOMQ03112 1051 aa18.95■□□□□ 0.62
CACNB3-220ENST00000551716 LPAR1Q92633 364 aa18.95■□□□□ 0.62
CACNB3-220ENST00000551716 EDC3Q96F86 508 aaKnown RBP18.95■□□□□ 0.62
CACNB3-220ENST00000551716 SIL1Q9H173 461 aa18.95■□□□□ 0.62
CACNB3-220ENST00000551716 DHX36Q9H2U1 1008 aaKnown RBP18.95■□□□□ 0.62
CACNB3-220ENST00000551716 HDAC5Q9UQL6 1122 aa18.95■□□□□ 0.62
CACNB3-220ENST00000551716 CCNA1P78396 465 aa18.94■□□□□ 0.62
CACNB3-220ENST00000551716 MAP2K5Q13163 448 aa18.94■□□□□ 0.62
CACNB3-220ENST00000551716 RASGRF1Q13972 1273 aa18.94■□□□□ 0.62
CACNB3-220ENST00000551716 SHHQ15465 462 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms