RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 CTNND1O60716 968 aaKnown RBP18.17■□□□□ 0.5
VPS29-209ENST00000551655 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
VPS29-209ENST00000551655 FGFR2P21802 821 aa18.17■□□□□ 0.5
VPS29-209ENST00000551655 GCLCP48506 637 aaPredicted RBP18.17■□□□□ 0.5
VPS29-209ENST00000551655 SPP2Q13103 211 aa18.17■□□□□ 0.5
VPS29-209ENST00000551655 WDR66Q8TBY9 1149 aa18.17■□□□□ 0.5
VPS29-209ENST00000551655 SENP6Q9GZR1 1112 aaPredicted RBP18.17■□□□□ 0.5
VPS29-209ENST00000551655 MYH2Q9UKX2 1941 aa18.17■□□□□ 0.5
VPS29-209ENST00000551655 ZKSCAN1P17029 563 aaPredicted RBP18.16■□□□□ 0.5
VPS29-209ENST00000551655 PLA2G5P39877 138 aa18.16■□□□□ 0.5
VPS29-209ENST00000551655 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
VPS29-209ENST00000551655 PROCA1Q8NCQ7 364 aaPredicted RBP18.16■□□□□ 0.5
VPS29-209ENST00000551655 BICC1Q9H694 974 aaKnown RBP18.16■□□□□ 0.5
VPS29-209ENST00000551655 TMEM265A0A087WTH1 108 aa18.15■□□□□ 0.5
VPS29-209ENST00000551655 ENTPD3O75355 529 aa18.15■□□□□ 0.5
VPS29-209ENST00000551655 VAMP4O75379 141 aa18.15■□□□□ 0.5
VPS29-209ENST00000551655 PICALMQ13492 652 aa18.15■□□□□ 0.5
VPS29-209ENST00000551655 TJAP1Q5JTD0 557 aa18.15■□□□□ 0.5
VPS29-209ENST00000551655 SLC4A10Q6U841 1118 aa18.15■□□□□ 0.5
VPS29-209ENST00000551655 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
VPS29-209ENST00000551655 IDI2Q9BXS1 227 aa18.15■□□□□ 0.5
VPS29-209ENST00000551655 TXNRD2Q9NNW7 524 aa18.15■□□□□ 0.5
VPS29-209ENST00000551655 LDHBP07195 334 aaKnown RBP18.14■□□□□ 0.49
VPS29-209ENST00000551655 IFIT1P09914 478 aaKnown RBP18.14■□□□□ 0.49
VPS29-209ENST00000551655 PUM3Q15397 648 aaKnown RBP18.14■□□□□ 0.49
VPS29-209ENST00000551655 NUDT12Q9BQG2 462 aa18.14■□□□□ 0.49
VPS29-209ENST00000551655 MORF4L1Q9UBU8 362 aa18.14■□□□□ 0.49
VPS29-209ENST00000551655 FANCIQ9NVI1 1328 aa18.14■□□□□ 0.49
VPS29-209ENST00000551655 RTP1P59025 263 aa18.13■□□□□ 0.49
VPS29-209ENST00000551655 RRP1BQ14684 758 aaKnown RBP18.13■□□□□ 0.49
VPS29-209ENST00000551655 WWC1Q8IX03 1113 aa18.13■□□□□ 0.49
VPS29-209ENST00000551655 XRCC5P13010 732 aaKnown RBP18.12■□□□□ 0.49
VPS29-209ENST00000551655 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
VPS29-209ENST00000551655 FAM122AQ96E09 287 aa18.12■□□□□ 0.49
VPS29-209ENST00000551655 KIF16BQ96L93 1317 aa18.12■□□□□ 0.49
VPS29-209ENST00000551655 ALDH1L1O75891 902 aa18.11■□□□□ 0.49
VPS29-209ENST00000551655 RABL6Q3YEC7 729 aaPredicted RBP18.11■□□□□ 0.49
VPS29-209ENST00000551655 ZNF280CQ8ND82 737 aa18.11■□□□□ 0.49
VPS29-209ENST00000551655 SOCS4Q8WXH5 440 aa18.11■□□□□ 0.49
VPS29-209ENST00000551655 USP6NLQ92738 828 aa18.11■□□□□ 0.49
VPS29-209ENST00000551655 BADQ92934 168 aa18.11■□□□□ 0.49
VPS29-209ENST00000551655 P2RX7Q99572 595 aaKnown RBP18.11■□□□□ 0.49
VPS29-209ENST00000551655 SRCIN1Q9C0H9 1055 aa18.11■□□□□ 0.49
VPS29-209ENST00000551655 PORCNQ9H237 461 aa18.11■□□□□ 0.49
VPS29-209ENST00000551655 PRKAG2Q9UGJ0 569 aa18.11■□□□□ 0.49
VPS29-209ENST00000551655 ATP11BQ9Y2G3 1177 aa18.11■□□□□ 0.49
VPS29-209ENST00000551655 SLC5A1P13866 664 aa18.1■□□□□ 0.49
VPS29-209ENST00000551655 SMAD3P84022 425 aaKnown RBP18.1■□□□□ 0.49
VPS29-209ENST00000551655 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
VPS29-209ENST00000551655 PABPC4Q13310 644 aaKnown RBP eCLIP18.1■□□□□ 0.49
VPS29-209ENST00000551655 Q3C1V9 767 aa18.1■□□□□ 0.49
VPS29-209ENST00000551655 PRDM5Q9NQX1 630 aaPredicted RBP18.1■□□□□ 0.49
VPS29-209ENST00000551655 RLFQ13129 1914 aa18.1■□□□□ 0.49
VPS29-209ENST00000551655 GAKO14976 1311 aa18.09■□□□□ 0.49
VPS29-209ENST00000551655 IRX3P78415 501 aaPredicted RBP18.09■□□□□ 0.49
VPS29-209ENST00000551655 PDE3AQ14432 1141 aa18.09■□□□□ 0.49
VPS29-209ENST00000551655 GRIN2CQ14957 1233 aa18.09■□□□□ 0.49
VPS29-209ENST00000551655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.09■□□□□ 0.49
VPS29-209ENST00000551655 FLRT1Q9NZU1 646 aa18.09■□□□□ 0.49
VPS29-209ENST00000551655 MORN1Q5T089 497 aa18.08■□□□□ 0.48
VPS29-209ENST00000551655 POTEEQ6S8J3 1075 aa18.08■□□□□ 0.48
VPS29-209ENST00000551655 GPR142Q7Z601 462 aa18.08■□□□□ 0.48
VPS29-209ENST00000551655 GPRC5AQ8NFJ5 357 aa18.08■□□□□ 0.48
VPS29-209ENST00000551655 LPIN2Q92539 896 aa18.08■□□□□ 0.48
VPS29-209ENST00000551655 RBPJLQ9UBG7 517 aa18.08■□□□□ 0.48
VPS29-209ENST00000551655 NDUFB9Q9Y6M9 179 aa18.08■□□□□ 0.48
VPS29-209ENST00000551655 UTYO14607 1347 aa18.07■□□□□ 0.48
VPS29-209ENST00000551655 RGS2P41220 211 aa18.07■□□□□ 0.48
VPS29-209ENST00000551655 BTDP43251 543 aa18.07■□□□□ 0.48
VPS29-209ENST00000551655 HERVK_113P62684 666 aa18.07■□□□□ 0.48
VPS29-209ENST00000551655 MTMR2Q13614 643 aa18.07■□□□□ 0.48
VPS29-209ENST00000551655 SH3D19Q5HYK7 790 aa18.07■□□□□ 0.48
VPS29-209ENST00000551655 SH3RF1Q7Z6J0 888 aa18.07■□□□□ 0.48
VPS29-209ENST00000551655 TRMT44Q8IYL2 757 aaKnown RBP18.07■□□□□ 0.48
VPS29-209ENST00000551655 APBA2Q99767 749 aa18.07■□□□□ 0.48
VPS29-209ENST00000551655 SALL1Q9NSC2 1324 aa18.06■□□□□ 0.48
VPS29-209ENST00000551655 CNGA1P29973 690 aa18.06■□□□□ 0.48
VPS29-209ENST00000551655 PHKA1P46020 1223 aa18.06■□□□□ 0.48
VPS29-209ENST00000551655 MAP3K12Q12852 859 aa18.06■□□□□ 0.48
VPS29-209ENST00000551655 GJC2Q5T442 439 aaPredicted RBP18.06■□□□□ 0.48
VPS29-209ENST00000551655 PPM1EQ8WY54 764 aa18.06■□□□□ 0.48
VPS29-209ENST00000551655 PAGR1Q9BTK6 254 aa18.06■□□□□ 0.48
VPS29-209ENST00000551655 OSBPL5Q9H0X9 879 aaPredicted RBP18.06■□□□□ 0.48
VPS29-209ENST00000551655 DDX20Q9UHI6 824 aaKnown RBP18.06■□□□□ 0.48
VPS29-209ENST00000551655 BDP1A6H8Y1 2624 aa18.06■□□□□ 0.48
VPS29-209ENST00000551655 USP17L5A8MUK1 530 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 TBC1D12O60347 775 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 MAPK4P31152 587 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
VPS29-209ENST00000551655 CAP2P40123 477 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 EPHB4P54760 987 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 ERVK-9P63128 1117 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 ERVK-24P63145 666 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 JAG1P78504 1218 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 CCDC27Q2M243 656 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 SHROOM1Q2M3G4 852 aaPredicted RBP18.05■□□□□ 0.48
VPS29-209ENST00000551655 TRIM60Q495X7 471 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 PLEKHH3Q7Z736 793 aa18.05■□□□□ 0.48
VPS29-209ENST00000551655 DZIP1Q86YF9 867 aaKnown RBP18.05■□□□□ 0.48
VPS29-209ENST00000551655 IL16Q14005 1332 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms