RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 CTGFP29279 349 aa28.23■■■□□ 2.11
TROAP-216ENST00000551567 AACSQ86V21 672 aa28.23■■■□□ 2.11
TROAP-216ENST00000551567 ERC1Q8IUD2 1116 aa28.23■■■□□ 2.11
TROAP-216ENST00000551567 ZNF333Q96JL9 665 aa28.23■■■□□ 2.11
TROAP-216ENST00000551567 NDUFB9Q9Y6M9 179 aa28.23■■■□□ 2.11
TROAP-216ENST00000551567 MGAMO43451 1857 aa28.23■■■□□ 2.11
TROAP-216ENST00000551567 PSMC4P43686 418 aa28.22■■■□□ 2.11
TROAP-216ENST00000551567 MAPKAPK5Q8IW41 473 aa28.22■■■□□ 2.11
TROAP-216ENST00000551567 TGFBRAP1Q8WUH2 860 aa28.22■■■□□ 2.11
TROAP-216ENST00000551567 TRIM47Q96LD4 638 aa28.22■■■□□ 2.11
TROAP-216ENST00000551567 COG6Q9Y2V7 657 aa28.22■■■□□ 2.11
TROAP-216ENST00000551567 IDH1O75874 414 aaKnown RBP28.21■■■□□ 2.11
TROAP-216ENST00000551567 GNRH1P01148 92 aa28.21■■■□□ 2.11
TROAP-216ENST00000551567 PPP4CP60510 307 aa28.21■■■□□ 2.11
TROAP-216ENST00000551567 NBPF11Q86T75 865 aa28.21■■■□□ 2.11
TROAP-216ENST00000551567 IL1RAPL2Q9NP60 686 aa28.21■■■□□ 2.11
TROAP-216ENST00000551567 BRCA2P51587 3418 aa28.21■■■□□ 2.11
TROAP-216ENST00000551567 FLT1P17948 1338 aa28.2■■■□□ 2.11
TROAP-216ENST00000551567 LOC285556D6RIA3 1793 aa28.2■■■□□ 2.11
TROAP-216ENST00000551567 MYCP01106 439 aaPredicted RBP28.2■■■□□ 2.1
TROAP-216ENST00000551567 RRP1BQ14684 758 aaKnown RBP28.2■■■□□ 2.1
TROAP-216ENST00000551567 SH3TC2Q8TF17 1288 aa28.2■■■□□ 2.1
TROAP-216ENST00000551567 FMNL1O95466 1100 aaPredicted RBP28.19■■■□□ 2.1
TROAP-216ENST00000551567 BCRP11274 1271 aa28.19■■■□□ 2.1
TROAP-216ENST00000551567 CYP7A1P22680 504 aa28.19■■■□□ 2.1
TROAP-216ENST00000551567 DYNLL1P63167 89 aaKnown RBP28.19■■■□□ 2.1
TROAP-216ENST00000551567 TMEM106CQ9BVX2 250 aa28.19■■■□□ 2.1
TROAP-216ENST00000551567 DHX36Q9H2U1 1008 aaKnown RBP28.19■■■□□ 2.1
TROAP-216ENST00000551567 HERC5Q9UII4 1024 aaKnown RBP28.19■■■□□ 2.1
TROAP-216ENST00000551567 APBB1O00213 710 aa28.18■■■□□ 2.1
TROAP-216ENST00000551567 CAP2P40123 477 aa28.18■■■□□ 2.1
TROAP-216ENST00000551567 HSP90AB4PQ58FF6 505 aa28.18■■■□□ 2.1
TROAP-216ENST00000551567 PI4KBQ9UBF8 816 aa28.18■■■□□ 2.1
TROAP-216ENST00000551567 DDX19BQ9UMR2 479 aa28.18■■■□□ 2.1
TROAP-216ENST00000551567 MYH1P12882 1939 aa28.18■■■□□ 2.1
TROAP-216ENST00000551567 EN2P19622 333 aaPredicted RBP28.17■■■□□ 2.1
TROAP-216ENST00000551567 OSBPP22059 807 aa28.17■■■□□ 2.1
TROAP-216ENST00000551567 PRMT2P55345 433 aa28.17■■■□□ 2.1
TROAP-216ENST00000551567 RHPN1Q8TCX5 695 aa28.17■■■□□ 2.1
TROAP-216ENST00000551567 ANTXR1Q9H6X2 564 aa28.17■■■□□ 2.1
TROAP-216ENST00000551567 SRRDQ9UH36 339 aa28.17■■■□□ 2.1
TROAP-216ENST00000551567 RCAN3Q9UKA8 241 aa28.17■■■□□ 2.1
TROAP-216ENST00000551567 SLC45A1Q9Y2W3 748 aa28.17■■■□□ 2.1
TROAP-216ENST00000551567 IGSF3O75054 1194 aa28.16■■■□□ 2.1
TROAP-216ENST00000551567 SPP2Q13103 211 aa28.16■■■□□ 2.1
TROAP-216ENST00000551567 TREML2Q5T2D2 321 aa28.16■■■□□ 2.1
TROAP-216ENST00000551567 MAGEB6Q8N7X4 407 aa28.16■■■□□ 2.1
TROAP-216ENST00000551567 MIGA1Q8NAN2 632 aa28.16■■■□□ 2.1
TROAP-216ENST00000551567 SMCR8Q8TEV9 937 aaPredicted RBP28.16■■■□□ 2.1
TROAP-216ENST00000551567 BCL11AQ9H165 835 aa28.16■■■□□ 2.1
TROAP-216ENST00000551567 SAP30BPQ9UHR5 308 aaKnown RBP28.16■■■□□ 2.1
TROAP-216ENST00000551567 PALD1Q9ULE6 856 aa28.16■■■□□ 2.1
TROAP-216ENST00000551567 AGTPBP1Q9UPW5 1226 aa28.16■■■□□ 2.1
TROAP-216ENST00000551567 MKI67P46013 3256 aaKnown RBP28.16■■■□□ 2.1
TROAP-216ENST00000551567 SLC4A8Q2Y0W8 1093 aa28.15■■■□□ 2.1
TROAP-216ENST00000551567 PRPF38BQ5VTL8 546 aaKnown RBP28.15■■■□□ 2.1
TROAP-216ENST00000551567 ZNF280CQ8ND82 737 aa28.15■■■□□ 2.1
TROAP-216ENST00000551567 ZBTB40Q9NUA8 1239 aa28.15■■■□□ 2.1
TROAP-216ENST00000551567 MYPNQ86TC9 1320 aa28.15■■■□□ 2.1
TROAP-216ENST00000551567 HMMRO75330 724 aa28.14■■■□□ 2.1
TROAP-216ENST00000551567 HOXD10P28358 340 aa28.14■■■□□ 2.1
TROAP-216ENST00000551567 RPAP2Q8IXW5 612 aaPredicted RBP28.14■■■□□ 2.1
TROAP-216ENST00000551567 CRACR2BQ8N4Y2 399 aaPredicted RBP28.14■■■□□ 2.1
TROAP-216ENST00000551567 TRIM34Q9BYJ4 488 aa28.14■■■□□ 2.1
TROAP-216ENST00000551567 DNAJC18Q9H819 358 aa28.14■■■□□ 2.1
TROAP-216ENST00000551567 USP17L5A8MUK1 530 aa28.13■■■□□ 2.09
TROAP-216ENST00000551567 HMGCS2P54868 508 aa28.13■■■□□ 2.09
TROAP-216ENST00000551567 FCGRTP55899 365 aa28.13■■■□□ 2.09
TROAP-216ENST00000551567 SIRT2Q8IXJ6 389 aa28.13■■■□□ 2.09
TROAP-216ENST00000551567 PROCA1Q8NCQ7 364 aaPredicted RBP28.13■■■□□ 2.09
TROAP-216ENST00000551567 RAET1EQ8TD07 263 aa28.13■■■□□ 2.09
TROAP-216ENST00000551567 MAP3K12Q12852 859 aa28.12■■■□□ 2.09
TROAP-216ENST00000551567 KIF1BPQ96EK5 621 aa28.12■■■□□ 2.09
TROAP-216ENST00000551567 TBC1D2Q9BYX2 928 aa28.12■■■□□ 2.09
TROAP-216ENST00000551567 PRKCZQ05513 592 aa28.11■■■□□ 2.09
TROAP-216ENST00000551567 SHROOM1Q2M3G4 852 aaPredicted RBP28.11■■■□□ 2.09
TROAP-216ENST00000551567 CLASRPQ8N2M8 674 aaKnown RBP28.11■■■□□ 2.09
TROAP-216ENST00000551567 AS3MTQ9HBK9 375 aa28.11■■■□□ 2.09
TROAP-216ENST00000551567 GDF11O95390 407 aa28.1■■■□□ 2.09
TROAP-216ENST00000551567 HLA-DOAP06340 250 aa28.1■■■□□ 2.09
TROAP-216ENST00000551567 USP5P45974 858 aa28.1■■■□□ 2.09
TROAP-216ENST00000551567 JAG1P78504 1218 aa28.1■■■□□ 2.09
TROAP-216ENST00000551567 FOXP4Q8IVH2 680 aaPredicted RBP28.1■■■□□ 2.09
TROAP-216ENST00000551567 PNMA3Q9UL41 463 aa28.1■■■□□ 2.09
TROAP-216ENST00000551567 NAV1Q8NEY1 1877 aa28.09■■■□□ 2.09
TROAP-216ENST00000551567 ASNSP08243 561 aa28.09■■■□□ 2.09
TROAP-216ENST00000551567 GRK4P32298 578 aa28.09■■■□□ 2.09
TROAP-216ENST00000551567 METTL16Q86W50 562 aaKnown RBP28.09■■■□□ 2.09
TROAP-216ENST00000551567 ANKRD13CQ8N6S4 541 aa28.09■■■□□ 2.09
TROAP-216ENST00000551567 IFIT2P09913 472 aaKnown RBP28.08■■■□□ 2.09
TROAP-216ENST00000551567 MTMR2Q13614 643 aa28.08■■■□□ 2.09
TROAP-216ENST00000551567 MTFR1Q15390 333 aa28.08■■■□□ 2.09
TROAP-216ENST00000551567 C20orf194Q5TEA3 1177 aa28.08■■■□□ 2.09
TROAP-216ENST00000551567 CERS3Q8IU89 383 aa28.08■■■□□ 2.09
TROAP-216ENST00000551567 DNAJC2Q99543 621 aaKnown RBP28.08■■■□□ 2.09
TROAP-216ENST00000551567 GABRQQ9UN88 632 aa28.08■■■□□ 2.09
TROAP-216ENST00000551567 DDX60LQ5H9U9 1706 aaKnown RBP28.08■■■□□ 2.09
TROAP-216ENST00000551567 CHMP4BQ9H444 224 aaKnown RBP28.07■■■□□ 2.08
TROAP-216ENST00000551567 TTF1Q15361 905 aaPredicted RBP28.06■■■□□ 2.08
TROAP-216ENST00000551567 SH3D19Q5HYK7 790 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms