RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
NEK3-203ENST00000551355 DICER1Q9UPY3 1922 aaKnown RBP12.28□□□□□ -0.44
NEK3-203ENST00000551355 PLCD1P51178 756 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 NBPF9Q3BBW0 867 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.45
NEK3-203ENST00000551355 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
NEK3-203ENST00000551355 USP50Q70EL3 339 aaPredicted RBP12.27□□□□□ -0.45
NEK3-203ENST00000551355 SAMD7Q7Z3H4 446 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 IQCA1Q86XH1 822 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 MB21D2Q8IYB1 491 aaPredicted RBP12.27□□□□□ -0.45
NEK3-203ENST00000551355 ZNF444Q8N0Y2 327 aaPredicted RBP12.27□□□□□ -0.45
NEK3-203ENST00000551355 TMTC2Q8N394 836 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 ZSCAN31Q96LW9 406 aaPredicted RBP12.27□□□□□ -0.45
NEK3-203ENST00000551355 TTC14Q96N46 770 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 IPO9Q96P70 1041 aaKnown RBP12.27□□□□□ -0.45
NEK3-203ENST00000551355 TRIM34Q9BYJ4 488 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 VEZTQ9HBM0 779 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 TOMM22Q9NS69 142 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 HERC5Q9UII4 1024 aaKnown RBP12.27□□□□□ -0.45
NEK3-203ENST00000551355 HACL1Q9UJ83 578 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.27□□□□□ -0.45
NEK3-203ENST00000551355 PCDHAC2Q9Y5I4 1007 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 TAF6LQ9Y6J9 622 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 PITPNM2Q9BZ72 1349 aa12.27□□□□□ -0.45
NEK3-203ENST00000551355 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
NEK3-203ENST00000551355 CYP2D7A0A087X1C5 515 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 CLRN2A0PK11 232 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 ERICH2A1L162 156 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 B4E1Z4 1266 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 K7ELQ4 463 aaPredicted RBP12.26□□□□□ -0.45
NEK3-203ENST00000551355 PRC1O43663 620 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 EPS15P42566 896 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 GABPAQ06546 454 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 TCP10Q12799 353 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 PNMA8AQ86V59 439 aaPredicted RBP12.26□□□□□ -0.45
NEK3-203ENST00000551355 METTL16Q86W50 562 aaKnown RBP12.26□□□□□ -0.45
NEK3-203ENST00000551355 CRACR2BQ8N4Y2 399 aaPredicted RBP12.26□□□□□ -0.45
NEK3-203ENST00000551355 ZC3H15Q8WU90 426 aaKnown RBP12.26□□□□□ -0.45
NEK3-203ENST00000551355 CCDC17Q96LX7 622 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 UBAC1Q9BSL1 405 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 AGXT2Q9BYV1 514 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 ZSWIM5Q9P217 1185 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 LIMCH1Q9UPQ0 1083 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 NEDD4P46934 1319 aa12.26□□□□□ -0.45
NEK3-203ENST00000551355 TIAM2Q8IVF5 1701 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 SBF1O95248 1867 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 SHTN1A0MZ66 631 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 TBC1D12O60347 775 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
NEK3-203ENST00000551355 KDM4AO75164 1064 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 CYP2D6P10635 497 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 CDK8P49336 464 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 CACNB3P54284 484 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 RRP12Q5JTH9 1297 aaKnown RBP12.25□□□□□ -0.45
NEK3-203ENST00000551355 CSRNP1Q96S65 589 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 SH2B1Q9NRF2 756 aaPredicted RBP12.25□□□□□ -0.45
NEK3-203ENST00000551355 TCP11L1Q9NUJ3 509 aa12.25□□□□□ -0.45
NEK3-203ENST00000551355 TSPY2A6NKD2 308 aa12.24□□□□□ -0.45
NEK3-203ENST00000551355 LIFRP42702 1097 aa12.24□□□□□ -0.45
NEK3-203ENST00000551355 AK2P54819 239 aa12.24□□□□□ -0.45
NEK3-203ENST00000551355 Q6ZUG5 572 aa12.24□□□□□ -0.45
NEK3-203ENST00000551355 TBC1D2Q9BYX2 928 aa12.24□□□□□ -0.45
NEK3-203ENST00000551355 ANGEL1Q9UNK9 670 aaKnown RBP12.24□□□□□ -0.45
NEK3-203ENST00000551355 CNTNAP1P78357 1384 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 DDTLA6NHG4 134 aaPredicted RBP12.23□□□□□ -0.45
NEK3-203ENST00000551355 IFIT3O14879 490 aaKnown RBP12.23□□□□□ -0.45
NEK3-203ENST00000551355 EGFRP00533 1210 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 TSPY3P0CV98 308 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 TSPY8P0CW00 308 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 CPA1P15085 419 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 EPHX2P34913 555 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 RCAN1P53805 252 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 EVCP57679 992 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 RASA3Q14644 834 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 TMEM67Q5HYA8 995 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 ZFPM1Q8IX07 1006 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 TRPM4Q8TD43 1214 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
NEK3-203ENST00000551355 DYNLL2Q96FJ2 89 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 ZNF274Q96GC6 653 aaPredicted RBP12.23□□□□□ -0.45
NEK3-203ENST00000551355 ZSCAN10Q96SZ4 725 aaPredicted RBP12.23□□□□□ -0.45
NEK3-203ENST00000551355 DEFB129Q9H1M3 183 aa12.23□□□□□ -0.45
NEK3-203ENST00000551355 SRCAPQ6ZRS2 3230 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 PRDM1O75626 825 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 RASA1P20936 1047 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 ANTXR2P58335 489 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 TFAP4Q01664 338 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 MAP3K10Q02779 954 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 TOB2Q14106 344 aaPredicted RBP12.22□□□□□ -0.45
NEK3-203ENST00000551355 WTAPQ15007 396 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 SUPT20HL1Q3ZLR7 823 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 ANGEL2Q5VTE6 544 aaKnown RBP12.22□□□□□ -0.45
NEK3-203ENST00000551355 TATDN1Q6P1N9 297 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 SYNE3Q6ZMZ3 975 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 CYB5R4Q7L1T6 521 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 SH3BP5LQ7L8J4 393 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 SGMS1Q86VZ5 419 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms