RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
LETMD1-229ENST00000551261 SYNE3Q6ZMZ3 975 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 C16orf86Q6ZW13 317 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 OSBPL5Q9H0X9 879 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-229ENST00000551261 KCNQ5Q9NR82 932 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
LETMD1-229ENST00000551261 DICER1Q9UPY3 1922 aaKnown RBP16.7■□□□□ 0.26
LETMD1-229ENST00000551261 ATRNL1Q5VV63 1379 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 PLIN4Q96Q06 1357 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 IFIT3O14879 490 aaKnown RBP16.69■□□□□ 0.26
LETMD1-229ENST00000551261 RAD17O75943 681 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 CDKL5O76039 1030 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 LMNB1P20700 586 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 RBM5P52756 815 aaKnown RBP eCLIP16.69■□□□□ 0.26
LETMD1-229ENST00000551261 CXCL9Q07325 125 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 WTAPQ15007 396 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 CFAP100Q494V2 611 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 CCDC83Q8IWF9 413 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 DPF2Q92785 391 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 MXD3Q9BW11 206 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 ADAMTSL1Q8N6G6 1762 aa16.69■□□□□ 0.26
LETMD1-229ENST00000551261 KLF18A0A0U1RQI7 1052 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 CCDC196A0A1B0GTZ2 297 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 CCDC69A6NI79 296 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 GOLGA8BA8MQT2 603 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 MYO1BO43795 1136 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 CALM1P0DP23 149 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 CALM2P0DP24 149 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 CALM3P0DP25 149 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 RAB3GAP1Q15042 981 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 DLGAP5Q15398 846 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
LETMD1-229ENST00000551261 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 SPRYD3Q8NCJ5 442 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 LY9Q9HBG7 655 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 MKNK2Q9HBH9 465 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 TCP11L1Q9NUJ3 509 aa16.68■□□□□ 0.26
LETMD1-229ENST00000551261 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
LETMD1-229ENST00000551261 RANBP6O60518 1105 aaKnown RBP16.67■□□□□ 0.26
LETMD1-229ENST00000551261 LARGE1O95461 756 aa16.67■□□□□ 0.26
LETMD1-229ENST00000551261 PDIA3P30101 505 aaKnown RBP16.67■□□□□ 0.26
LETMD1-229ENST00000551261 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
LETMD1-229ENST00000551261 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
LETMD1-229ENST00000551261 NFXL1Q6ZNB6 911 aa16.67■□□□□ 0.26
LETMD1-229ENST00000551261 ZSCAN10Q96SZ4 725 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-229ENST00000551261 SYT17Q9BSW7 474 aa16.67■□□□□ 0.26
LETMD1-229ENST00000551261 LRRC2Q9BYS8 371 aa16.67■□□□□ 0.26
LETMD1-229ENST00000551261 SLC12A7Q9Y666 1083 aa16.67■□□□□ 0.26
LETMD1-229ENST00000551261 TNKSO95271 1327 aa16.67■□□□□ 0.26
LETMD1-229ENST00000551261 WDR33Q9C0J8 1336 aaKnown RBP16.67■□□□□ 0.26
LETMD1-229ENST00000551261 ZBTB43O43298 467 aa16.66■□□□□ 0.26
LETMD1-229ENST00000551261 DDAH1O94760 285 aa16.66■□□□□ 0.26
LETMD1-229ENST00000551261 ZNF280AP59817 542 aaPredicted RBP16.66■□□□□ 0.26
LETMD1-229ENST00000551261 DGKHQ86XP1 1220 aa16.66■□□□□ 0.26
LETMD1-229ENST00000551261 ZNF444Q8N0Y2 327 aaPredicted RBP16.66■□□□□ 0.26
LETMD1-229ENST00000551261 SERPINB13Q9UIV8 391 aa16.66■□□□□ 0.26
LETMD1-229ENST00000551261 ZC3H4Q9UPT8 1303 aaKnown RBP16.66■□□□□ 0.26
LETMD1-229ENST00000551261 CYP2D7A0A087X1C5 515 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 CPLX1O14810 134 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 PTMSP20962 102 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 METAP2P50579 478 aaKnown RBP eCLIP16.65■□□□□ 0.26
LETMD1-229ENST00000551261 RASSF7Q02833 373 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 GABPAQ06546 454 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 SCRN1Q12765 414 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 PICALMQ13492 652 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 COL9A3Q14050 684 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-229ENST00000551261 SEC23AQ15436 765 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 SMARCC2Q8TAQ2 1214 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 GBP4Q96PP9 640 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 MAP3K14Q99558 947 aa16.65■□□□□ 0.26
LETMD1-229ENST00000551261 TSPY3P0CV98 308 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 TSPY8P0CW00 308 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 CYP2D6P10635 497 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 TNFAIP1Q13829 316 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 SPDYE2Q495Y8 402 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 IFIT1BQ5T764 474 aaKnown RBP16.64■□□□□ 0.25
LETMD1-229ENST00000551261 FAM83AQ86UY5 434 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 ANKS1AQ92625 1134 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 CCDC17Q96LX7 622 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 PI4KBQ9UBF8 816 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 SAP30BPQ9UHR5 308 aaKnown RBP16.64■□□□□ 0.25
LETMD1-229ENST00000551261 ATP6V1DQ9Y5K8 247 aa16.64■□□□□ 0.25
LETMD1-229ENST00000551261 GJB2P29033 226 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 TNNI2P48788 182 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 CDK8P49336 464 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 PLCD1P51178 756 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 ST3GAL1Q11201 340 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 CLEC17AQ6ZS10 378 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 CATIPQ7Z7H3 387 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 FOXP4Q8IVH2 680 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-229ENST00000551261 GPC2Q8N158 579 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 ENAHQ8N8S7 591 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-229ENST00000551261 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 ZBED3Q96IU2 234 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms