RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 RASGRP2Q7LDG7 609 aa13.91□□□□□ -0.18
ERBB3-219ENST00000551242 SUGP1Q8IWZ8 645 aaKnown RBP13.91□□□□□ -0.18
ERBB3-219ENST00000551242 ANKRD24Q8TF21 1146 aa13.91□□□□□ -0.18
ERBB3-219ENST00000551242 HOOK1Q9UJC3 728 aaKnown RBP13.91□□□□□ -0.18
ERBB3-219ENST00000551242 FAM237AA0A1B0GTK4 181 aa13.91□□□□□ -0.18
ERBB3-219ENST00000551242 FOXP2O15409 715 aa13.91□□□□□ -0.18
ERBB3-219ENST00000551242 RNF113AO15541 343 aaKnown RBP13.91□□□□□ -0.18
ERBB3-219ENST00000551242 ERLIN2O94905 339 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 FXR1P51114 621 aaKnown RBP eCLIP13.9□□□□□ -0.18
ERBB3-219ENST00000551242 SLC39A6Q13433 755 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 FBXW10Q5XX13 1052 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
ERBB3-219ENST00000551242 GSPT2Q8IYD1 628 aaKnown RBP13.9□□□□□ -0.18
ERBB3-219ENST00000551242 NKX2-3Q8TAU0 364 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 SMARCC1Q92922 1105 aaPredicted RBP13.9□□□□□ -0.18
ERBB3-219ENST00000551242 SLIT1O75093 1534 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 FGAP02671 866 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 PIP4K2BP78356 416 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 WHAMMP3Q1A5X7 153 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 C1orf141Q5JVX7 400 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 APTXQ7Z2E3 356 aaKnown RBP13.9□□□□□ -0.18
ERBB3-219ENST00000551242 MLKLQ8NB16 471 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 HINFPQ9BQA5 517 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 HPCAL4Q9UM19 191 aa13.9□□□□□ -0.18
ERBB3-219ENST00000551242 RGPD8O14715 1765 aaPredicted RBP13.9□□□□□ -0.18
ERBB3-219ENST00000551242 ENC1O14682 589 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 MFAP3LO75121 409 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 COBLO75128 1261 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 GGCXP38435 758 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 PSEN1P49768 467 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 MORC3Q14149 939 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 IMMTQ16891 758 aaKnown RBP13.89□□□□□ -0.19
ERBB3-219ENST00000551242 WASHC4Q2M389 1173 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 FBXL16Q8N461 479 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 HDAC6Q9UBN7 1215 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 TRIM10Q9UDY6 481 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 MYO6Q9UM54 1294 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 CDHR2Q9BYE9 1310 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 CDC25AP30304 524 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 MNAT1P51948 309 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 EIF5P55010 431 aaKnown RBP13.89□□□□□ -0.19
ERBB3-219ENST00000551242 FKBP4Q02790 459 aaKnown RBP eCLIP13.89□□□□□ -0.19
ERBB3-219ENST00000551242 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 KRI1Q8N9T8 703 aaKnown RBP13.89□□□□□ -0.19
ERBB3-219ENST00000551242 METTL22Q9BUU2 404 aaPredicted RBP13.89□□□□□ -0.19
ERBB3-219ENST00000551242 KAT14Q9H8E8 782 aa13.89□□□□□ -0.19
ERBB3-219ENST00000551242 IFIT1P09914 478 aaKnown RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 ARHGAP25P42331 645 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 AARSP49588 968 aaKnown RBP eCLIP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 TUBB2AQ13885 445 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 CT47A1Q5JQC4 288 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 WDR93Q6P2C0 686 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 CCDC91Q7Z6B0 441 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 RALYLQ86SE5 291 aaKnown RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 CCDC148Q8NFR7 591 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 SLF1Q9BQI6 1058 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 TUBB2BQ9BVA1 445 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 NAA15Q9BXJ9 866 aaKnown RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 SENP2Q9HC62 589 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 HEG1Q9ULI3 1381 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 PXDNQ92626 1479 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 GYPCP04921 128 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 CASP1P29466 404 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 ERVK-24P63145 666 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 SWT1Q5T5J6 900 aaKnown RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 USP49Q70CQ1 688 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 MICU3Q86XE3 530 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 FAM169AQ9Y6X4 670 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 A0A087WZG4 1122 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 RNF225M0QZC1 329 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 SRGAP2O75044 1071 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 SARSP49591 514 aaKnown RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 MMP14P50281 582 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 TUBB4BP68371 445 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 AMPD2Q01433 879 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 TTC19Q6DKK2 380 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 SMYD4Q8IYR2 804 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 NCOA7Q8NI08 942 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 CXorf56Q9H5V9 222 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 TTF2Q9UNY4 1162 aaKnown RBP13.88□□□□□ -0.19
ERBB3-219ENST00000551242 TBX22Q9Y458 520 aa13.88□□□□□ -0.19
ERBB3-219ENST00000551242 HNRNPH1P31943 449 aaKnown RBP13.87□□□□□ -0.19
ERBB3-219ENST00000551242 METAP2P50579 478 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERBB3-219ENST00000551242 PLCD1P51178 756 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 TRDNQ13061 729 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 STIM1Q13586 685 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 KCNV1Q6PIU1 500 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 IP6K1Q92551 441 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 MYL10Q9BUA6 226 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 DACH1Q9UI36 760 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 GUCA1BQ9UMX6 200 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 TFR2Q9UP52 801 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 MYBL2P10244 700 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
ERBB3-219ENST00000551242 CCT6AP40227 531 aaKnown RBP13.87□□□□□ -0.19
ERBB3-219ENST00000551242 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
ERBB3-219ENST00000551242 CTCFLQ8NI51 663 aaPredicted RBP13.87□□□□□ -0.19
ERBB3-219ENST00000551242 CAPZA3Q96KX2 299 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms