RNA–Protein interactions for RNA: ENST00000550808.5

MTA1-218, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-218ENST00000550808 ZNF333Q96JL9 665 aa28.33■■■□□ 2.13
MTA1-218ENST00000550808 SIPA1L1O43166 1804 aa28.32■■■□□ 2.12
MTA1-218ENST00000550808 PSMC4P43686 418 aa28.32■■■□□ 2.12
MTA1-218ENST00000550808 NBPF11Q86T75 865 aa28.32■■■□□ 2.12
MTA1-218ENST00000550808 TRIM47Q96LD4 638 aa28.32■■■□□ 2.12
MTA1-218ENST00000550808 SH3TC2Q8TF17 1288 aa28.31■■■□□ 2.12
MTA1-218ENST00000550808 TMEM106CQ9BVX2 250 aa28.31■■■□□ 2.12
MTA1-218ENST00000550808 FMNL1O95466 1100 aaPredicted RBP28.3■■■□□ 2.12
MTA1-218ENST00000550808 GNRH1P01148 92 aa28.3■■■□□ 2.12
MTA1-218ENST00000550808 PLCG2P16885 1265 aa28.3■■■□□ 2.12
MTA1-218ENST00000550808 EN2P19622 333 aaPredicted RBP28.3■■■□□ 2.12
MTA1-218ENST00000550808 MAPKAPK5Q8IW41 473 aa28.3■■■□□ 2.12
MTA1-218ENST00000550808 TGFBRAP1Q8WUH2 860 aa28.3■■■□□ 2.12
MTA1-218ENST00000550808 AACSQ86V21 672 aa28.29■■■□□ 2.12
MTA1-218ENST00000550808 NDUFB9Q9Y6M9 179 aa28.29■■■□□ 2.12
MTA1-218ENST00000550808 BCRP11274 1271 aa28.28■■■□□ 2.12
MTA1-218ENST00000550808 MS4A1P11836 297 aa28.28■■■□□ 2.12
MTA1-218ENST00000550808 PPP4CP60510 307 aa28.28■■■□□ 2.12
MTA1-218ENST00000550808 RRP1BQ14684 758 aaKnown RBP28.28■■■□□ 2.12
MTA1-218ENST00000550808 ERC1Q8IUD2 1116 aa28.28■■■□□ 2.12
MTA1-218ENST00000550808 SRRDQ9UH36 339 aa28.28■■■□□ 2.12
MTA1-218ENST00000550808 IDH1O75874 414 aaKnown RBP28.27■■■□□ 2.12
MTA1-218ENST00000550808 OSBPP22059 807 aa28.27■■■□□ 2.12
MTA1-218ENST00000550808 CYP7A1P22680 504 aa28.27■■■□□ 2.12
MTA1-218ENST00000550808 PRMT2P55345 433 aa28.27■■■□□ 2.12
MTA1-218ENST00000550808 SLC4A8Q2Y0W8 1093 aa28.27■■■□□ 2.12
MTA1-218ENST00000550808 PRPF38BQ5VTL8 546 aaKnown RBP28.27■■■□□ 2.12
MTA1-218ENST00000550808 PI4KBQ9UBF8 816 aa28.27■■■□□ 2.12
MTA1-218ENST00000550808 MYH1P12882 1939 aa28.26■■■□□ 2.11
MTA1-218ENST00000550808 FLT1P17948 1338 aa28.26■■■□□ 2.11
MTA1-218ENST00000550808 CAP2P40123 477 aa28.26■■■□□ 2.11
MTA1-218ENST00000550808 DYNLL1P63167 89 aaKnown RBP28.26■■■□□ 2.11
MTA1-218ENST00000550808 SPP2Q13103 211 aa28.26■■■□□ 2.11
MTA1-218ENST00000550808 DHX36Q9H2U1 1008 aaKnown RBP28.26■■■□□ 2.11
MTA1-218ENST00000550808 IL1RAPL2Q9NP60 686 aa28.26■■■□□ 2.11
MTA1-218ENST00000550808 HERC5Q9UII4 1024 aaKnown RBP28.26■■■□□ 2.11
MTA1-218ENST00000550808 COG6Q9Y2V7 657 aa28.26■■■□□ 2.11
MTA1-218ENST00000550808 LOC285556D6RIA3 1793 aa28.25■■■□□ 2.11
MTA1-218ENST00000550808 APBB1O00213 710 aa28.25■■■□□ 2.11
MTA1-218ENST00000550808 HOXD10P28358 340 aa28.25■■■□□ 2.11
MTA1-218ENST00000550808 SAP30BPQ9UHR5 308 aaKnown RBP28.25■■■□□ 2.11
MTA1-218ENST00000550808 SLC45A1Q9Y2W3 748 aa28.25■■■□□ 2.11
MTA1-218ENST00000550808 MYPNQ86TC9 1320 aa28.24■■■□□ 2.11
MTA1-218ENST00000550808 TREML2Q5T2D2 321 aa28.24■■■□□ 2.11
MTA1-218ENST00000550808 RAET1EQ8TD07 263 aa28.24■■■□□ 2.11
MTA1-218ENST00000550808 SMCR8Q8TEV9 937 aaPredicted RBP28.24■■■□□ 2.11
MTA1-218ENST00000550808 BCL11AQ9H165 835 aa28.24■■■□□ 2.11
MTA1-218ENST00000550808 ANTXR1Q9H6X2 564 aa28.24■■■□□ 2.11
MTA1-218ENST00000550808 PALD1Q9ULE6 856 aa28.24■■■□□ 2.11
MTA1-218ENST00000550808 AGTPBP1Q9UPW5 1226 aa28.24■■■□□ 2.11
MTA1-218ENST00000550808 FCGRTP55899 365 aa28.23■■■□□ 2.11
MTA1-218ENST00000550808 HSP90AB4PQ58FF6 505 aa28.23■■■□□ 2.11
MTA1-218ENST00000550808 MAGEB6Q8N7X4 407 aa28.23■■■□□ 2.11
MTA1-218ENST00000550808 MIGA1Q8NAN2 632 aa28.23■■■□□ 2.11
MTA1-218ENST00000550808 ZNF280CQ8ND82 737 aa28.23■■■□□ 2.11
MTA1-218ENST00000550808 RHPN1Q8TCX5 695 aa28.23■■■□□ 2.11
MTA1-218ENST00000550808 CRACR2BQ8N4Y2 399 aaPredicted RBP28.22■■■□□ 2.11
MTA1-218ENST00000550808 TRIM34Q9BYJ4 488 aa28.22■■■□□ 2.11
MTA1-218ENST00000550808 DDX19BQ9UMR2 479 aa28.22■■■□□ 2.11
MTA1-218ENST00000550808 USP17L5A8MUK1 530 aa28.21■■■□□ 2.11
MTA1-218ENST00000550808 IGSF3O75054 1194 aa28.21■■■□□ 2.11
MTA1-218ENST00000550808 HMGCS2P54868 508 aa28.21■■■□□ 2.11
MTA1-218ENST00000550808 DNAJC18Q9H819 358 aa28.21■■■□□ 2.11
MTA1-218ENST00000550808 RCAN3Q9UKA8 241 aa28.21■■■□□ 2.11
MTA1-218ENST00000550808 PRKCZQ05513 592 aa28.2■■■□□ 2.1
MTA1-218ENST00000550808 PROCA1Q8NCQ7 364 aaPredicted RBP28.2■■■□□ 2.1
MTA1-218ENST00000550808 DOCK3Q8IZD9 2030 aa28.19■■■□□ 2.1
MTA1-218ENST00000550808 GRK4P32298 578 aa28.19■■■□□ 2.1
MTA1-218ENST00000550808 JAG1P78504 1218 aa28.19■■■□□ 2.1
MTA1-218ENST00000550808 MAP3K12Q12852 859 aa28.19■■■□□ 2.1
MTA1-218ENST00000550808 FOXP4Q8IVH2 680 aaPredicted RBP28.19■■■□□ 2.1
MTA1-218ENST00000550808 RPAP2Q8IXW5 612 aaPredicted RBP28.19■■■□□ 2.1
MTA1-218ENST00000550808 TBC1D2Q9BYX2 928 aa28.19■■■□□ 2.1
MTA1-218ENST00000550808 AS3MTQ9HBK9 375 aa28.19■■■□□ 2.1
MTA1-218ENST00000550808 ZBTB40Q9NUA8 1239 aa28.19■■■□□ 2.1
MTA1-218ENST00000550808 GABRQQ9UN88 632 aa28.19■■■□□ 2.1
MTA1-218ENST00000550808 HMMRO75330 724 aa28.18■■■□□ 2.1
MTA1-218ENST00000550808 MTFR1Q15390 333 aa28.18■■■□□ 2.1
MTA1-218ENST00000550808 SHROOM1Q2M3G4 852 aaPredicted RBP28.18■■■□□ 2.1
MTA1-218ENST00000550808 SIRT2Q8IXJ6 389 aa28.18■■■□□ 2.1
MTA1-218ENST00000550808 ANKRD13CQ8N6S4 541 aa28.18■■■□□ 2.1
MTA1-218ENST00000550808 BIN2Q9UBW5 565 aaPredicted RBP28.18■■■□□ 2.1
MTA1-218ENST00000550808 PNMA3Q9UL41 463 aa28.18■■■□□ 2.1
MTA1-218ENST00000550808 GDF11O95390 407 aa28.17■■■□□ 2.1
MTA1-218ENST00000550808 HLA-DOAP06340 250 aa28.17■■■□□ 2.1
MTA1-218ENST00000550808 USP5P45974 858 aa28.17■■■□□ 2.1
MTA1-218ENST00000550808 CLASRPQ8N2M8 674 aaKnown RBP28.17■■■□□ 2.1
MTA1-218ENST00000550808 KIF1BPQ96EK5 621 aa28.17■■■□□ 2.1
MTA1-218ENST00000550808 BRCA2P51587 3418 aa28.17■■■□□ 2.1
MTA1-218ENST00000550808 ASNSP08243 561 aa28.16■■■□□ 2.1
MTA1-218ENST00000550808 METTL16Q86W50 562 aaKnown RBP28.16■■■□□ 2.1
MTA1-218ENST00000550808 TNPO2O14787 897 aaKnown RBP28.15■■■□□ 2.1
MTA1-218ENST00000550808 SLC34A2O95436 690 aa28.15■■■□□ 2.1
MTA1-218ENST00000550808 MTMR2Q13614 643 aa28.15■■■□□ 2.1
MTA1-218ENST00000550808 IFIT2P09913 472 aaKnown RBP28.14■■■□□ 2.1
MTA1-218ENST00000550808 PABPC4Q13310 644 aaKnown RBP eCLIP28.14■■■□□ 2.1
MTA1-218ENST00000550808 SH3D19Q5HYK7 790 aa28.14■■■□□ 2.1
MTA1-218ENST00000550808 WDR18Q9BV38 432 aa28.14■■■□□ 2.1
MTA1-218ENST00000550808 MKI67P46013 3256 aaKnown RBP28.14■■■□□ 2.1
MTA1-218ENST00000550808 FLT3LGP49771 235 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms