RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 YEATS4O95619 227 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 STARD3NLO95772 234 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 TFRCP02786 760 aaKnown RBP12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 GPS2Q13227 327 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 LRRFIP1Q32MZ4 808 aaKnown RBP12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 CCDC191Q8NCU4 936 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 DHX58Q96C10 678 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 NFE2L3Q9Y4A8 694 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 B4E1Z4 1266 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 RHOXF2BP0C7M4 288 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 CDC27P30260 824 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 EIF5P55010 431 aaKnown RBP12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 PDE4BQ07343 736 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 CCDC102BQ68D86 513 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 KRT40Q6A162 431 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 ATL3Q6DD88 541 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 RHOXF2Q9BQY4 288 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 PARP3Q9Y6F1 533 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 SH3TC1Q8TE82 1336 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 TADA3O75528 432 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 ZAP70P43403 619 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 RAD51AP2Q09MP3 1159 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 SCARF1Q14162 830 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 TRIM65Q6PJ69 517 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 SHC4Q6S5L8 630 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 FAM89AQ96GI7 184 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 ISCA1Q9BUE6 129 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 MYH3P11055 1940 aa12.31□□□□□ -0.44
SMARCC2-208ENST00000550150 VWA3AA6NCI4 1184 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 PES1O00541 588 aaKnown RBP12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 CMA1P23946 247 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 AXDND1Q5T1B0 1012 aaPredicted RBP12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 VPS18Q9P253 973 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 MAP3K15Q6ZN16 1313 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 ANKRD65E5RJM6 399 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 H7C1W4 665 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 CAPN2P17655 700 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 AFMP43652 599 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 CPLX2Q6PUV4 134 aaKnown RBP12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 BCORQ6W2J9 1755 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 BRAPQ7Z569 592 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 JMYQ8N9B5 988 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 CHMP4CQ96CF2 233 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 KCNH3Q9ULD8 1083 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 KCNJ14Q9UNX9 436 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 MYH15Q9Y2K3 1946 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 TAF1P21675 1872 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 SALL1Q9NSC2 1324 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 A0A0U1RQJ8 604 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 EFCAB8A8MWE9 144 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 POLR2DO15514 142 aaKnown RBP12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 GPAA1O43292 621 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 REXO1L1PQ8IX06 675 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 ATRIPQ8WXE1 791 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 CCDC102AQ96A19 550 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 SAMSN1Q9NSI8 373 aaKnown RBP12.3□□□□□ -0.44
SMARCC2-208ENST00000550150 SOWAHDA6NJG2 315 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 CASP1P29466 404 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 CC2D1AQ6P1N0 951 aaPredicted RBP12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 ATG9AQ7Z3C6 839 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 VSTM4Q8IW00 320 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 STAMQ92783 540 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 CCDC87Q9NVE4 849 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 HPS5Q9UPZ3 1129 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 PHLPP2Q6ZVD8 1323 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 TRIM66O15016 1216 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 ARHGAP6O43182 974 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 IARSP41252 1262 aaKnown RBP12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 GRIN1Q05586 938 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 SLC39A14Q15043 492 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 NUP133Q8WUM0 1156 aa12.29□□□□□ -0.44
SMARCC2-208ENST00000550150 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 TBC1D8O95759 1140 aa12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 IL15P40933 162 aaPredicted RBP12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 RABL6Q3YEC7 729 aaPredicted RBP12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 DZIP3Q86Y13 1208 aaKnown RBP12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 CWC25Q9NXE8 425 aaPredicted RBP12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 GOLGA8AA7E2F4 631 aa12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 EYA2O00167 538 aa12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 ANTXR2P58335 489 aa12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
SMARCC2-208ENST00000550150 NKX2-3Q8TAU0 364 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms