RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 GJA5P36382 358 aa31.27■■■□□ 2.6
CPSF6-205ENST00000550075 PPATQ06203 517 aa31.27■■■□□ 2.6
CPSF6-205ENST00000550075 PPIL2Q13356 520 aa31.27■■■□□ 2.6
CPSF6-205ENST00000550075 FSD1Q9BTV5 496 aa31.27■■■□□ 2.6
CPSF6-205ENST00000550075 ARMT1Q9H993 441 aa31.27■■■□□ 2.6
CPSF6-205ENST00000550075 PALD1Q9ULE6 856 aa31.27■■■□□ 2.6
CPSF6-205ENST00000550075 PHF20L1A8MW92 1017 aa31.26■■■□□ 2.59
CPSF6-205ENST00000550075 RNF113AO15541 343 aaKnown RBP31.26■■■□□ 2.59
CPSF6-205ENST00000550075 CTNND1O60716 968 aaKnown RBP31.26■■■□□ 2.59
CPSF6-205ENST00000550075 HSPA8P11142 646 aaKnown RBP31.26■■■□□ 2.59
CPSF6-205ENST00000550075 GTF2A2P52657 109 aa31.26■■■□□ 2.59
CPSF6-205ENST00000550075 TTC6Q86TZ1 520 aa31.26■■■□□ 2.59
CPSF6-205ENST00000550075 FOXP4Q8IVH2 680 aaPredicted RBP31.26■■■□□ 2.59
CPSF6-205ENST00000550075 SCYL3Q8IZE3 742 aa31.26■■■□□ 2.59
CPSF6-205ENST00000550075 APPBP2Q92624 585 aa31.26■■■□□ 2.59
CPSF6-205ENST00000550075 CNKSR2Q8WXI2 1034 aa31.25■■■□□ 2.59
CPSF6-205ENST00000550075 DDRGK1Q96HY6 314 aa31.25■■■□□ 2.59
CPSF6-205ENST00000550075 RNF186Q9NXI6 227 aa31.25■■■□□ 2.59
CPSF6-205ENST00000550075 FAM196BA6NMK8 535 aa31.24■■■□□ 2.59
CPSF6-205ENST00000550075 ALDH1A1P00352 501 aa31.24■■■□□ 2.59
CPSF6-205ENST00000550075 OTUD7BQ6GQQ9 843 aa31.24■■■□□ 2.59
CPSF6-205ENST00000550075 PRDM10Q9NQV6 1147 aa31.24■■■□□ 2.59
CPSF6-205ENST00000550075 TRPA1O75762 1119 aa31.23■■■□□ 2.59
CPSF6-205ENST00000550075 LBX1P52954 281 aa31.23■■■□□ 2.59
CPSF6-205ENST00000550075 SLFNL1Q499Z3 407 aa31.23■■■□□ 2.59
CPSF6-205ENST00000550075 EVI5LQ96CN4 794 aa31.23■■■□□ 2.59
CPSF6-205ENST00000550075 ATP8A2Q9NTI2 1148 aa31.23■■■□□ 2.59
CPSF6-205ENST00000550075 SNAPC2Q13487 334 aa31.22■■■□□ 2.59
CPSF6-205ENST00000550075 EHD4Q9H223 541 aa31.22■■■□□ 2.59
CPSF6-205ENST00000550075 ATAD5Q96QE3 1844 aa31.21■■■□□ 2.59
CPSF6-205ENST00000550075 POLR3DP05423 398 aaPredicted RBP31.21■■■□□ 2.59
CPSF6-205ENST00000550075 METTL16Q86W50 562 aaKnown RBP31.21■■■□□ 2.59
CPSF6-205ENST00000550075 AMOTL1Q8IY63 956 aa31.21■■■□□ 2.59
CPSF6-205ENST00000550075 SDR42E1Q8WUS8 393 aa31.21■■■□□ 2.59
CPSF6-205ENST00000550075 PUS7LQ9H0K6 701 aaKnown RBP31.21■■■□□ 2.59
CPSF6-205ENST00000550075 MCM9Q9NXL9 1143 aa31.21■■■□□ 2.59
CPSF6-205ENST00000550075 TSKSQ9UJT2 592 aa31.21■■■□□ 2.59
CPSF6-205ENST00000550075 CCL15-CCL14A0A0B4J2E2 113 aa31.2■■■□□ 2.59
CPSF6-205ENST00000550075 TESPA1A2RU30 521 aaPredicted RBP31.2■■■□□ 2.59
CPSF6-205ENST00000550075 CHGBP05060 677 aa31.2■■■□□ 2.59
CPSF6-205ENST00000550075 SLURP2P0DP57 97 aa31.2■■■□□ 2.59
CPSF6-205ENST00000550075 CETPP11597 493 aa31.2■■■□□ 2.59
CPSF6-205ENST00000550075 CCL15Q16663 113 aa31.2■■■□□ 2.59
CPSF6-205ENST00000550075 SLC4A8Q2Y0W8 1093 aa31.2■■■□□ 2.59
CPSF6-205ENST00000550075 IFNL1Q8IU54 200 aa31.2■■■□□ 2.59
CPSF6-205ENST00000550075 DCP1AQ9NPI6 582 aaPredicted RBP31.2■■■□□ 2.59
CPSF6-205ENST00000550075 SERPINB13Q9UIV8 391 aa31.2■■■□□ 2.59
CPSF6-205ENST00000550075 IRF6O14896 467 aa31.19■■■□□ 2.58
CPSF6-205ENST00000550075 PLEKHM2Q8IWE5 1019 aa31.19■■■□□ 2.58
CPSF6-205ENST00000550075 MS4A4AQ96JQ5 239 aa31.19■■■□□ 2.58
CPSF6-205ENST00000550075 OSBPL3Q9H4L5 887 aa31.19■■■□□ 2.58
CPSF6-205ENST00000550075 SLC4A4Q9Y6R1 1079 aa31.19■■■□□ 2.58
CPSF6-205ENST00000550075 CENPBP07199 599 aaPredicted RBP31.18■■■□□ 2.58
CPSF6-205ENST00000550075 CAP2P40123 477 aa31.18■■■□□ 2.58
CPSF6-205ENST00000550075 TICAM2Q86XR7 235 aa31.18■■■□□ 2.58
CPSF6-205ENST00000550075 NEFLP07196 543 aa31.17■■■□□ 2.58
CPSF6-205ENST00000550075 PTPRAP18433 802 aa31.17■■■□□ 2.58
CPSF6-205ENST00000550075 OSBP2Q969R2 916 aa31.17■■■□□ 2.58
CPSF6-205ENST00000550075 TBC1D2Q9BYX2 928 aa31.17■■■□□ 2.58
CPSF6-205ENST00000550075 DNAJC18Q9H819 358 aa31.17■■■□□ 2.58
CPSF6-205ENST00000550075 GINM1Q9NU53 330 aa31.17■■■□□ 2.58
CPSF6-205ENST00000550075 TAOK2Q9UL54 1235 aa31.17■■■□□ 2.58
CPSF6-205ENST00000550075 KCNH4Q9UQ05 1017 aa31.17■■■□□ 2.58
CPSF6-205ENST00000550075 TRIM6-TRIM34B2RNG4 842 aa31.16■■■□□ 2.58
CPSF6-205ENST00000550075 IGF2BP3O00425 579 aaKnown RBP eCLIP31.16■■■□□ 2.58
CPSF6-205ENST00000550075 PRKAB2O43741 272 aa31.16■■■□□ 2.58
CPSF6-205ENST00000550075 GNAT2P19087 354 aa31.16■■■□□ 2.58
CPSF6-205ENST00000550075 BRI3BPQ8WY22 251 aa31.16■■■□□ 2.58
CPSF6-205ENST00000550075 ZHX2Q9Y6X8 837 aa31.16■■■□□ 2.58
CPSF6-205ENST00000550075 BAZ2AQ9UIF9 1905 aaKnown RBP31.16■■■□□ 2.58
CPSF6-205ENST00000550075 CXCL11O14625 94 aa31.15■■■□□ 2.58
CPSF6-205ENST00000550075 ASNSP08243 561 aa31.15■■■□□ 2.58
CPSF6-205ENST00000550075 STRBPQ96SI9 672 aaKnown RBP31.15■■■□□ 2.58
CPSF6-205ENST00000550075 CFHR5Q9BXR6 569 aa31.15■■■□□ 2.58
CPSF6-205ENST00000550075 GPAA1O43292 621 aa31.14■■■□□ 2.58
CPSF6-205ENST00000550075 ZMYM1Q5SVZ6 1142 aa31.14■■■□□ 2.58
CPSF6-205ENST00000550075 PHIPQ8WWQ0 1821 aa31.13■■■□□ 2.57
CPSF6-205ENST00000550075 ZCCHC17Q9NP64 241 aaKnown RBP31.13■■■□□ 2.57
CPSF6-205ENST00000550075 PLCD1P51178 756 aa31.12■■■□□ 2.57
CPSF6-205ENST00000550075 GIMAP6Q6P9H5 292 aa31.12■■■□□ 2.57
CPSF6-205ENST00000550075 AS3MTQ9HBK9 375 aa31.12■■■□□ 2.57
CPSF6-205ENST00000550075 ARPP21Q9UBL0 812 aaPredicted RBP31.12■■■□□ 2.57
CPSF6-205ENST00000550075 USP17L5A8MUK1 530 aa31.11■■■□□ 2.57
CPSF6-205ENST00000550075 M0R2C6 588 aa31.11■■■□□ 2.57
CPSF6-205ENST00000550075 RILPL2Q969X0 211 aa31.11■■■□□ 2.57
CPSF6-205ENST00000550075 PTPN18Q99952 460 aa31.11■■■□□ 2.57
CPSF6-205ENST00000550075 TBC1D8O95759 1140 aa31.1■■■□□ 2.57
CPSF6-205ENST00000550075 TATDN1Q6P1N9 297 aa31.1■■■□□ 2.57
CPSF6-205ENST00000550075 SWAP70Q9UH65 585 aa31.1■■■□□ 2.57
CPSF6-205ENST00000550075 ZBTB21Q9ULJ3 1066 aa31.1■■■□□ 2.57
CPSF6-205ENST00000550075 AFG3L2Q9Y4W6 797 aa31.1■■■□□ 2.57
CPSF6-205ENST00000550075 PTPRFP10586 1907 aa31.1■■■□□ 2.57
CPSF6-205ENST00000550075 MYH8P13535 1937 aa31.1■■■□□ 2.57
CPSF6-205ENST00000550075 GDF11O95390 407 aa31.09■■■□□ 2.57
CPSF6-205ENST00000550075 RRP1BQ14684 758 aaKnown RBP31.09■■■□□ 2.57
CPSF6-205ENST00000550075 NOM1Q5C9Z4 860 aaKnown RBP31.09■■■□□ 2.57
CPSF6-205ENST00000550075 A0A0G2JLL6 359 aaPredicted RBP31.08■■■□□ 2.57
CPSF6-205ENST00000550075 USP17L12C9JPN9 530 aa31.08■■■□□ 2.57
CPSF6-205ENST00000550075 USP17L21D6R901 530 aa31.08■■■□□ 2.57
CPSF6-205ENST00000550075 GABPAQ06546 454 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 1255 ms