RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 SLC12A7Q9Y666 1083 aa28.77■■■□□ 2.2
TGFBR1-207ENST00000549766 SCN9AQ15858 1988 aa28.76■■■□□ 2.19
TGFBR1-207ENST00000549766 CCDC69A6NI79 296 aa28.76■■■□□ 2.19
TGFBR1-207ENST00000549766 PRDM1O75626 825 aa28.76■■■□□ 2.19
TGFBR1-207ENST00000549766 RAB11FIP4Q86YS3 637 aa28.76■■■□□ 2.19
TGFBR1-207ENST00000549766 FAM217BQ9NTX9 383 aaPredicted RBP28.76■■■□□ 2.19
TGFBR1-207ENST00000549766 TNKSO95271 1327 aa28.76■■■□□ 2.19
TGFBR1-207ENST00000549766 POLD1P28340 1107 aa28.75■■■□□ 2.19
TGFBR1-207ENST00000549766 MAPKAPK5Q8IW41 473 aa28.75■■■□□ 2.19
TGFBR1-207ENST00000549766 ZSCAN10Q96SZ4 725 aaPredicted RBP28.75■■■□□ 2.19
TGFBR1-207ENST00000549766 FLT1P17948 1338 aa28.75■■■□□ 2.19
TGFBR1-207ENST00000549766 F8W031 263 aaPredicted RBP28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 RANBP6O60518 1105 aaKnown RBP28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 ATF5Q9Y2D1 282 aaPredicted RBP28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 FOCADQ5VW36 1801 aa28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 USP17L3A6NCW0 530 aa28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 USP17L4A6NCW7 530 aa28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 CDC27P30260 824 aa28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 ADD1P35611 737 aaKnown RBP28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 USP17L1Q7RTZ2 530 aa28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 MICU3Q86XE3 530 aa28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 IQCA1Q86XH1 822 aa28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 AMOTL1Q8IY63 956 aa28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 ENAHQ8N8S7 591 aaPredicted RBP28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 TMEM87AQ8NBN3 555 aa28.74■■■□□ 2.19
TGFBR1-207ENST00000549766 CPLX1O14810 134 aa28.73■■■□□ 2.19
TGFBR1-207ENST00000549766 PRPF40AO75400 957 aaKnown RBP28.73■■■□□ 2.19
TGFBR1-207ENST00000549766 NTRK3Q16288 839 aa28.73■■■□□ 2.19
TGFBR1-207ENST00000549766 GOLGA8AA7E2F4 631 aa28.72■■■□□ 2.19
TGFBR1-207ENST00000549766 HDLBPQ00341 1268 aaKnown RBP28.72■■■□□ 2.19
TGFBR1-207ENST00000549766 SYNE3Q6ZMZ3 975 aa28.72■■■□□ 2.19
TGFBR1-207ENST00000549766 SGIP1Q9BQI5 828 aa28.72■■■□□ 2.19
TGFBR1-207ENST00000549766 PPIP5K2O43314 1243 aa28.71■■■□□ 2.19
TGFBR1-207ENST00000549766 RXRAP19793 462 aa28.71■■■□□ 2.19
TGFBR1-207ENST00000549766 PLCD1P51178 756 aa28.71■■■□□ 2.19
TGFBR1-207ENST00000549766 KLHL40Q2TBA0 621 aa28.71■■■□□ 2.19
TGFBR1-207ENST00000549766 RGS22Q8NE09 1264 aa28.71■■■□□ 2.19
TGFBR1-207ENST00000549766 TEKT1Q969V4 418 aa28.71■■■□□ 2.19
TGFBR1-207ENST00000549766 MYL10Q9BUA6 226 aa28.71■■■□□ 2.19
TGFBR1-207ENST00000549766 YDJCA8MPS7 323 aa28.7■■■□□ 2.19
TGFBR1-207ENST00000549766 CDKL5O76039 1030 aa28.7■■■□□ 2.19
TGFBR1-207ENST00000549766 POLR3DP05423 398 aaPredicted RBP28.7■■■□□ 2.19
TGFBR1-207ENST00000549766 R3HDM1Q15032 1099 aaKnown RBP28.7■■■□□ 2.19
TGFBR1-207ENST00000549766 FOXD4L6Q3SYB3 417 aaPredicted RBP28.7■■■□□ 2.19
TGFBR1-207ENST00000549766 APOBEC3HQ6NTF7 200 aaKnown RBP28.7■■■□□ 2.19
TGFBR1-207ENST00000549766 FOXD4L3Q6VB84 417 aaPredicted RBP28.7■■■□□ 2.19
TGFBR1-207ENST00000549766 VPS33BQ9H267 617 aa28.7■■■□□ 2.19
TGFBR1-207ENST00000549766 H3BQV1 296 aa28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 SCNN1DP51172 638 aa28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 GSE1Q14687 1217 aa28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 SOGA3Q5TF21 947 aa28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 IFFO2Q5TF58 517 aa28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 ZNF654Q8IZM8 581 aa28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 DYNLL2Q96FJ2 89 aa28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 ZDHHC15Q96MV8 337 aa28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 PIM2Q9P1W9 311 aa28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 ORC3Q9UBD5 711 aaPredicted RBP28.7■■■□□ 2.18
TGFBR1-207ENST00000549766 WDHD1O75717 1129 aaPredicted RBP28.69■■■□□ 2.18
TGFBR1-207ENST00000549766 CRKP46108 304 aa28.69■■■□□ 2.18
TGFBR1-207ENST00000549766 RESTQ13127 1097 aa28.69■■■□□ 2.18
TGFBR1-207ENST00000549766 CPLX2Q6PUV4 134 aaKnown RBP28.69■■■□□ 2.18
TGFBR1-207ENST00000549766 SAP30BPQ9UHR5 308 aaKnown RBP28.69■■■□□ 2.18
TGFBR1-207ENST00000549766 PPFIA3O75145 1194 aa28.68■■■□□ 2.18
TGFBR1-207ENST00000549766 FERMT3Q86UX7 667 aa28.68■■■□□ 2.18
TGFBR1-207ENST00000549766 ZSCAN16Q9H4T2 348 aaPredicted RBP28.68■■■□□ 2.18
TGFBR1-207ENST00000549766 CNPY2Q9Y2B0 182 aa28.68■■■□□ 2.18
TGFBR1-207ENST00000549766 DNM1Q05193 864 aaKnown RBP28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 SLC4A8Q2Y0W8 1093 aa28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 FAM47AQ5JRC9 791 aa28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 IFIT1BQ5T764 474 aaKnown RBP28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 C16orf86Q6ZW13 317 aa28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 DDX49Q9Y6V7 483 aaKnown RBP28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 ADAMTSL1Q8N6G6 1762 aa28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 PPP2R5BQ15173 497 aa28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 CDC42EP5Q6NZY7 148 aa28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 KIAA0825Q8IV33 1275 aa28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 CCDC144CPQ8IYA2 1237 aa28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 USP40Q9NVE5 1235 aa28.67■■■□□ 2.18
TGFBR1-207ENST00000549766 PSME4Q14997 1843 aa28.66■■■□□ 2.18
TGFBR1-207ENST00000549766 STK36Q9NRP7 1315 aa28.66■■■□□ 2.18
TGFBR1-207ENST00000549766 TSPY2A6NKD2 308 aa28.66■■■□□ 2.18
TGFBR1-207ENST00000549766 IFNAR1P17181 557 aa28.66■■■□□ 2.18
TGFBR1-207ENST00000549766 RTN1Q16799 776 aa28.66■■■□□ 2.18
TGFBR1-207ENST00000549766 USP48Q86UV5 1035 aa28.66■■■□□ 2.18
TGFBR1-207ENST00000549766 FANCBQ8NB91 859 aa28.66■■■□□ 2.18
TGFBR1-207ENST00000549766 SRCAPQ6ZRS2 3230 aa28.66■■■□□ 2.18
TGFBR1-207ENST00000549766 ZNF287Q9HBT7 754 aa28.65■■■□□ 2.18
TGFBR1-207ENST00000549766 GDPD2Q9HCC8 539 aa28.65■■■□□ 2.18
TGFBR1-207ENST00000549766 DDX4Q9NQI0 724 aaKnown RBP28.65■■■□□ 2.18
TGFBR1-207ENST00000549766 TCP11L1Q9NUJ3 509 aa28.65■■■□□ 2.18
TGFBR1-207ENST00000549766 MYH1P12882 1939 aa28.65■■■□□ 2.18
TGFBR1-207ENST00000549766 BRCA1P38398 1863 aaKnown RBP28.64■■■□□ 2.18
TGFBR1-207ENST00000549766 CCDC196A0A1B0GTZ2 297 aa28.64■■■□□ 2.18
TGFBR1-207ENST00000549766 GPT2Q8TD30 523 aa28.64■■■□□ 2.18
TGFBR1-207ENST00000549766 ANKS1AQ92625 1134 aa28.64■■■□□ 2.18
TGFBR1-207ENST00000549766 MKNK2Q9HBH9 465 aa28.64■■■□□ 2.18
TGFBR1-207ENST00000549766 SERPINA10Q9UK55 444 aa28.64■■■□□ 2.18
TGFBR1-207ENST00000549766 TCHHQ07283 1943 aa28.64■■■□□ 2.18
TGFBR1-207ENST00000549766 COL4A5P29400 1685 aa28.64■■■□□ 2.18
TGFBR1-207ENST00000549766 NMT2O60551 498 aa28.64■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms