RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 MPNDQ8N594 471 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 ENAHQ8N8S7 591 aaPredicted RBP22.3■■□□□ 1.16
BRF1-215ENST00000549655 AIFM3Q96NN9 605 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 ANO8Q9HCE9 1232 aaPredicted RBP22.3■■□□□ 1.16
BRF1-215ENST00000549655 MKRN1Q9UHC7 482 aaKnown RBP22.3■■□□□ 1.16
BRF1-215ENST00000549655 COL11A2P13942 1736 aaPredicted RBP22.29■■□□□ 1.16
BRF1-215ENST00000549655 RIMBP2O15034 1052 aa22.29■■□□□ 1.16
BRF1-215ENST00000549655 LETM1O95202 739 aaPredicted RBP22.29■■□□□ 1.16
BRF1-215ENST00000549655 USP17L8P0C7I0 530 aa22.29■■□□□ 1.16
BRF1-215ENST00000549655 EZH2Q15910 746 aaKnown RBP22.29■■□□□ 1.16
BRF1-215ENST00000549655 IQCA1Q86XH1 822 aa22.29■■□□□ 1.16
BRF1-215ENST00000549655 TBC1D22AQ8WUA7 517 aa22.29■■□□□ 1.16
BRF1-215ENST00000549655 RTFDC1Q9BY42 306 aaPredicted RBP22.29■■□□□ 1.16
BRF1-215ENST00000549655 IFNAR1P17181 557 aa22.29■■□□□ 1.16
BRF1-215ENST00000549655 SSRP1Q08945 709 aaKnown RBP22.29■■□□□ 1.16
BRF1-215ENST00000549655 PGBD1Q96JS3 809 aa22.29■■□□□ 1.16
BRF1-215ENST00000549655 USP28Q96RU2 1077 aa22.29■■□□□ 1.16
BRF1-215ENST00000549655 FTOQ9C0B1 505 aaKnown RBP eCLIP22.29■■□□□ 1.16
BRF1-215ENST00000549655 EN1Q05925 392 aaPredicted RBP22.28■■□□□ 1.16
BRF1-215ENST00000549655 FANCBQ8NB91 859 aa22.28■■□□□ 1.16
BRF1-215ENST00000549655 NUP133Q8WUM0 1156 aa22.28■■□□□ 1.16
BRF1-215ENST00000549655 CAMKK2Q96RR4 588 aa22.28■■□□□ 1.16
BRF1-215ENST00000549655 SLC26A6Q9BXS9 759 aa22.28■■□□□ 1.16
BRF1-215ENST00000549655 COA1Q9GZY4 146 aa22.28■■□□□ 1.16
BRF1-215ENST00000549655 TSPY26PQ9H489 355 aa22.28■■□□□ 1.16
BRF1-215ENST00000549655 RCOR1Q9UKL0 485 aa22.28■■□□□ 1.16
BRF1-215ENST00000549655 FAM205AQ6ZU69 1335 aa22.28■■□□□ 1.16
BRF1-215ENST00000549655 STK36Q9NRP7 1315 aa22.28■■□□□ 1.16
BRF1-215ENST00000549655 CCDC196A0A1B0GTZ2 297 aa22.27■■□□□ 1.16
BRF1-215ENST00000549655 FMNL1O95466 1100 aaPredicted RBP22.27■■□□□ 1.16
BRF1-215ENST00000549655 LIG1P18858 919 aa22.27■■□□□ 1.16
BRF1-215ENST00000549655 PDE4BQ07343 736 aa22.27■■□□□ 1.16
BRF1-215ENST00000549655 SLC15A2Q16348 729 aa22.27■■□□□ 1.16
BRF1-215ENST00000549655 DPP8Q6V1X1 898 aaPredicted RBP22.27■■□□□ 1.16
BRF1-215ENST00000549655 ZC3H12CQ9C0D7 883 aaKnown RBP22.27■■□□□ 1.16
BRF1-215ENST00000549655 BTDP43251 543 aa22.27■■□□□ 1.15
BRF1-215ENST00000549655 SLC4A8Q2Y0W8 1093 aa22.27■■□□□ 1.15
BRF1-215ENST00000549655 IFIT1BQ5T764 474 aaKnown RBP22.27■■□□□ 1.15
BRF1-215ENST00000549655 C12orf60Q5U649 245 aa22.27■■□□□ 1.15
BRF1-215ENST00000549655 BRAPQ7Z569 592 aa22.27■■□□□ 1.15
BRF1-215ENST00000549655 ZNF622Q969S3 477 aaKnown RBP eCLIP22.27■■□□□ 1.154e-9■■□□□ 13.9
BRF1-215ENST00000549655 TMX4Q9H1E5 349 aaPredicted RBP22.27■■□□□ 1.15
BRF1-215ENST00000549655 GPR75-ASB3A0A0A6YYF3 556 aa22.26■■□□□ 1.15
BRF1-215ENST00000549655 POLR3DP05423 398 aaPredicted RBP22.26■■□□□ 1.15
BRF1-215ENST00000549655 GTF2IP78347 998 aa22.26■■□□□ 1.15
BRF1-215ENST00000549655 KIF23Q02241 960 aaPredicted RBP22.26■■□□□ 1.15
BRF1-215ENST00000549655 CERS3Q8IU89 383 aa22.26■■□□□ 1.15
BRF1-215ENST00000549655 TGFBRAP1Q8WUH2 860 aa22.26■■□□□ 1.15
BRF1-215ENST00000549655 ECM29Q5VYK3 1845 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 KRT40Q6A162 431 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 C2CD5Q86YS7 1000 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 KIF28PB7ZC32 967 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 UBE2Q2LH0YL09 131 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 FAM47AQ5JRC9 791 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 SLF2Q8IX21 1173 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 TRIM22Q8IYM9 498 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 BICD2Q8TD16 824 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 FAM163AQ96GL9 167 aaPredicted RBP22.25■■□□□ 1.15
BRF1-215ENST00000549655 STK32BQ9NY57 414 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 TAOK2Q9UL54 1235 aa22.25■■□□□ 1.15
BRF1-215ENST00000549655 PPP2R5BQ15173 497 aa22.24■■□□□ 1.15
BRF1-215ENST00000549655 CATIPQ7Z7H3 387 aa22.24■■□□□ 1.15
BRF1-215ENST00000549655 NBPF11Q86T75 865 aa22.24■■□□□ 1.15
BRF1-215ENST00000549655 WASF1Q92558 559 aa22.24■■□□□ 1.15
BRF1-215ENST00000549655 TRIM29Q14134 588 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 AMOTL1Q8IY63 956 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 CRACR2BQ8N4Y2 399 aaPredicted RBP22.23■■□□□ 1.15
BRF1-215ENST00000549655 RTEL1Q9NZ71 1219 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 DLEC1Q9Y238 1755 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 H0YIN7 160 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 NMT2O60551 498 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 PLCG2P16885 1265 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 MYSM1Q5VVJ2 828 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 MAPKAPK5Q8IW41 473 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 CMTR1Q8N1G2 835 aaKnown RBP22.23■■□□□ 1.15
BRF1-215ENST00000549655 CCDC82Q8N4S0 544 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 DACT1Q9NYF0 836 aa22.23■■□□□ 1.15
BRF1-215ENST00000549655 GAKO14976 1311 aa22.22■■□□□ 1.15
BRF1-215ENST00000549655 TSPY2A6NKD2 308 aa22.22■■□□□ 1.15
BRF1-215ENST00000549655 GUCY1A2P33402 732 aa22.22■■□□□ 1.15
BRF1-215ENST00000549655 TEX11Q8IYF3 940 aa22.22■■□□□ 1.15
BRF1-215ENST00000549655 FBXW7Q969H0 707 aa22.22■■□□□ 1.15
BRF1-215ENST00000549655 DYNLL2Q96FJ2 89 aa22.22■■□□□ 1.15
BRF1-215ENST00000549655 NAV1Q8NEY1 1877 aa22.22■■□□□ 1.15
BRF1-215ENST00000549655 ROBO3Q96MS0 1386 aa22.21■■□□□ 1.15
BRF1-215ENST00000549655 DOK7Q18PE1 504 aa22.21■■□□□ 1.15
BRF1-215ENST00000549655 STYK1Q6J9G0 422 aa22.21■■□□□ 1.15
BRF1-215ENST00000549655 KLHL34Q8N239 644 aa22.21■■□□□ 1.15
BRF1-215ENST00000549655 CDK5RAP2Q96SN8 1893 aa22.21■■□□□ 1.15
BRF1-215ENST00000549655 TROAPQ12815 778 aa22.21■■□□□ 1.15
BRF1-215ENST00000549655 ANP32BQ92688 251 aaKnown RBP22.21■■□□□ 1.15
BRF1-215ENST00000549655 NUP62CLQ9H1M0 184 aa22.21■■□□□ 1.15
BRF1-215ENST00000549655 SAP30BPQ9UHR5 308 aaKnown RBP22.21■■□□□ 1.15
BRF1-215ENST00000549655 CLIC4Q9Y696 253 aa22.21■■□□□ 1.15
BRF1-215ENST00000549655 NR1I2O75469 434 aa22.2■■□□□ 1.14
BRF1-215ENST00000549655 DEXIO95424 95 aa22.2■■□□□ 1.14
BRF1-215ENST00000549655 CALM1P0DP23 149 aa22.2■■□□□ 1.14
BRF1-215ENST00000549655 CALM2P0DP24 149 aa22.2■■□□□ 1.14
BRF1-215ENST00000549655 CALM3P0DP25 149 aa22.2■■□□□ 1.14
BRF1-215ENST00000549655 RHBDL3P58872 404 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms