RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 NUP62CLQ9H1M0 184 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 ATP6V0A2Q9Y487 856 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 CCDC69A6NI79 296 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 GOLGA8AA7E2F4 631 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 PRPF3O43395 683 aaKnown RBP11.61□□□□□ -0.55
RAB5B-206ENST00000549505 DEXIO95424 95 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 SLC39A14Q15043 492 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 MAP3K11Q16584 847 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 C12orf60Q5U649 245 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 FMR1NBQ8N0W7 255 aaPredicted RBP11.61□□□□□ -0.55
RAB5B-206ENST00000549505 FANCBQ8NB91 859 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 RTFDC1Q9BY42 306 aaPredicted RBP11.61□□□□□ -0.55
RAB5B-206ENST00000549505 CD209Q9NNX6 404 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 PSME4Q14997 1843 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 CPLX1O14810 134 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 CCDC192P0DO97 292 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 CLCN1P35523 988 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 DYNLL1P63167 89 aaKnown RBP11.61□□□□□ -0.55
RAB5B-206ENST00000549505 FAM160A1Q05DH4 1040 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 TROAPQ12815 778 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 AXDND1Q5T1B0 1012 aaPredicted RBP11.61□□□□□ -0.55
RAB5B-206ENST00000549505 FAM173BQ6P4H8 233 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 ZNF654Q8IZM8 581 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 ENAHQ8N8S7 591 aaPredicted RBP11.61□□□□□ -0.55
RAB5B-206ENST00000549505 MIGA1Q8NAN2 632 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 RPGRQ92834 1020 aaKnown RBP11.61□□□□□ -0.55
RAB5B-206ENST00000549505 HPSEQ9Y251 543 aa11.61□□□□□ -0.55
RAB5B-206ENST00000549505 MYH2Q9UKX2 1941 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 KIF28PB7ZC32 967 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 IARSP41252 1262 aaKnown RBP11.6□□□□□ -0.55
RAB5B-206ENST00000549505 SSRP1Q08945 709 aaKnown RBP11.6□□□□□ -0.55
RAB5B-206ENST00000549505 DGKHQ86XP1 1220 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 TBC1D16Q8TBP0 767 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 ALG1Q9BT22 464 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 USP25Q9UHP3 1055 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 GGA1Q9UJY5 639 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 KIF13BQ9NQT8 1826 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 MMP1P03956 469 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 NPR1P16066 1061 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 CMA1P23946 247 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 PRDX5P30044 214 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 RTN1Q16799 776 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 KRT40Q6A162 431 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 NOL10Q9BSC4 688 aaKnown RBP11.6□□□□□ -0.55
RAB5B-206ENST00000549505 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.6□□□□□ -0.55
RAB5B-206ENST00000549505 MRVI1Q9Y6F6 885 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 LDHBP07195 334 aaKnown RBP11.6□□□□□ -0.55
RAB5B-206ENST00000549505 SLC3A2P08195 630 aaKnown RBP11.6□□□□□ -0.55
RAB5B-206ENST00000549505 SRGNP10124 158 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 PLCG2P16885 1265 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 SYNE3Q6ZMZ3 975 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 SDR42E1Q8WUS8 393 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 ANP32BQ92688 251 aaKnown RBP11.6□□□□□ -0.55
RAB5B-206ENST00000549505 BPIFA3Q9BQP9 254 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 ABCF2Q9UG63 623 aa11.6□□□□□ -0.55
RAB5B-206ENST00000549505 TNKSO95271 1327 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 ERICH2A1L162 156 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 SMARCA1P28370 1054 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 ZNF827Q17R98 1081 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 ANO1Q5XXA6 986 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
RAB5B-206ENST00000549505 COA1Q9GZY4 146 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 INCENPQ9NQS7 918 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 DACT1Q9NYF0 836 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 TFCP2L1Q9NZI6 479 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 TFIP11Q9UBB9 837 aaKnown RBP11.59□□□□□ -0.55
RAB5B-206ENST00000549505 PCDHA7Q9UN72 937 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 COL2A1P02458 1487 aaPredicted RBP11.59□□□□□ -0.55
RAB5B-206ENST00000549505 NR1I2O75469 434 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 TRIM37O94972 964 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 SLF2Q8IX21 1173 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 GOLPH3LQ9H4A5 285 aa11.59□□□□□ -0.55
RAB5B-206ENST00000549505 NOL7Q9UMY1 257 aaKnown RBP11.59□□□□□ -0.55
RAB5B-206ENST00000549505 BAG3O95817 575 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 PKN1Q16512 942 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 FAM200AQ8TCP9 573 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 TNFRSF25Q93038 417 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 STYK1Q6J9G0 422 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 RCSD1Q6JBY9 416 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 PHF20Q9BVI0 1012 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 SH3GLB2Q9NR46 395 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 POLLQ9UGP5 575 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 USP17L12C9JPN9 530 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 USP17L21D6R901 530 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 NPM3O75607 178 aaKnown RBP11.58□□□□□ -0.56
RAB5B-206ENST00000549505 RHBDL3P58872 404 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 TYRO3Q06418 890 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 TMTC3Q6ZXV5 915 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 IQCA1Q86XH1 822 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.56
RAB5B-206ENST00000549505 MRPS27Q92552 414 aaKnown RBP11.58□□□□□ -0.56
RAB5B-206ENST00000549505 UBAC1Q9BSL1 405 aa11.58□□□□□ -0.56
RAB5B-206ENST00000549505 SPTLC2O15270 562 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 ALDH1B1P30837 517 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 PDE6BP35913 854 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 PDE4BQ07343 736 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 CCAR1Q8IX12 1150 aaKnown RBP11.57□□□□□ -0.56
RAB5B-206ENST00000549505 TNMDQ9H2S6 317 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 MYH6P13533 1939 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms