RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MYH2Q9UKX2 1941 aa15.21■□□□□ 0.02
DDX54-206ENST00000549271 CTNND1O60716 968 aaKnown RBP15.2■□□□□ 0.02
DDX54-206ENST00000549271 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
DDX54-206ENST00000549271 FGFR2P21802 821 aa15.2■□□□□ 0.02
DDX54-206ENST00000549271 ALDH1L2Q3SY69 923 aa15.2■□□□□ 0.02
DDX54-206ENST00000549271 SH3BP5LQ7L8J4 393 aa15.2■□□□□ 0.02
DDX54-206ENST00000549271 PROCA1Q8NCQ7 364 aaPredicted RBP15.2■□□□□ 0.02
DDX54-206ENST00000549271 SYMPKQ92797 1274 aaKnown RBP15.2■□□□□ 0.02
DDX54-206ENST00000549271 RFX7Q2KHR2 1363 aa15.2■□□□□ 0.02
DDX54-206ENST00000549271 ENTPD3O75355 529 aa15.19■□□□□ 0.02
DDX54-206ENST00000549271 LHX8Q68G74 356 aa15.19■□□□□ 0.02
DDX54-206ENST00000549271 IDI2Q9BXS1 227 aa15.19■□□□□ 0.02
DDX54-206ENST00000549271 SEMA6BQ9H3T3 888 aa15.19■□□□□ 0.02
DDX54-206ENST00000549271 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.19■□□□□ 0.02
DDX54-206ENST00000549271 LRRFIP2Q9Y608 721 aaKnown RBP15.19■□□□□ 0.02
DDX54-206ENST00000549271 ATAD5Q96QE3 1844 aa15.19■□□□□ 0.02
DDX54-206ENST00000549271 SLURP2P0DP57 97 aa15.18■□□□□ 0.02
DDX54-206ENST00000549271 XRCC5P13010 732 aaKnown RBP15.18■□□□□ 0.02
DDX54-206ENST00000549271 PRDX5P30044 214 aa15.18■□□□□ 0.02
DDX54-206ENST00000549271 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
DDX54-206ENST00000549271 RGS3P49796 1198 aa15.18■□□□□ 0.02
DDX54-206ENST00000549271 PUM3Q15397 648 aaKnown RBP15.18■□□□□ 0.02
DDX54-206ENST00000549271 CCDC84Q86UT8 332 aaPredicted RBP15.18■□□□□ 0.02
DDX54-206ENST00000549271 MORF4L1Q9UBU8 362 aa15.18■□□□□ 0.02
DDX54-206ENST00000549271 DDTLA6NHG4 134 aaPredicted RBP15.17■□□□□ 0.02
DDX54-206ENST00000549271 EYA2O00167 538 aa15.17■□□□□ 0.02
DDX54-206ENST00000549271 IFIT1P09914 478 aaKnown RBP15.17■□□□□ 0.02
DDX54-206ENST00000549271 CT47B1P0C2W7 299 aaPredicted RBP15.17■□□□□ 0.02
DDX54-206ENST00000549271 CYP2B6P20813 491 aa15.17■□□□□ 0.02
DDX54-206ENST00000549271 KLHDC4Q8TBB5 520 aa15.17■□□□□ 0.02
DDX54-206ENST00000549271 LBHD1Q9BQE6 289 aaPredicted RBP15.17■□□□□ 0.02
DDX54-206ENST00000549271 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
DDX54-206ENST00000549271 ZBTB22O15209 634 aa15.16■□□□□ 0.02
DDX54-206ENST00000549271 CACNB2Q08289 660 aaPredicted RBP15.16■□□□□ 0.02
DDX54-206ENST00000549271 MYLIPQ8WY64 445 aa15.16■□□□□ 0.02
DDX54-206ENST00000549271 LPIN2Q92539 896 aa15.16■□□□□ 0.02
DDX54-206ENST00000549271 ASCC2Q9H1I8 757 aaPredicted RBP15.16■□□□□ 0.02
DDX54-206ENST00000549271 TTYH1Q9H313 450 aaPredicted RBP15.16■□□□□ 0.02
DDX54-206ENST00000549271 LDHBP07195 334 aaKnown RBP15.15■□□□□ 0.02
DDX54-206ENST00000549271 SOCS4Q8WXH5 440 aa15.15■□□□□ 0.02
DDX54-206ENST00000549271 SMC4Q9NTJ3 1288 aa15.15■□□□□ 0.02
DDX54-206ENST00000549271 SALL1Q9NSC2 1324 aa15.15■□□□□ 0.02
DDX54-206ENST00000549271 TNFRSF10AO00220 468 aa15.14■□□□□ 0.01
DDX54-206ENST00000549271 SLC5A1P13866 664 aa15.14■□□□□ 0.01
DDX54-206ENST00000549271 CCND3P30281 292 aaPredicted RBP15.14■□□□□ 0.01
DDX54-206ENST00000549271 SPP2Q13103 211 aa15.14■□□□□ 0.01
DDX54-206ENST00000549271 PABPC4Q13310 644 aaKnown RBP eCLIP15.14■□□□□ 0.013e-7■■■□□ 14.7
DDX54-206ENST00000549271 ATG9AQ7Z3C6 839 aa15.14■□□□□ 0.01
DDX54-206ENST00000549271 ZSCAN29Q8IWY8 852 aaPredicted RBP15.14■□□□□ 0.01
DDX54-206ENST00000549271 TRMT44Q8IYL2 757 aaKnown RBP15.14■□□□□ 0.01
DDX54-206ENST00000549271 USP6NLQ92738 828 aa15.14■□□□□ 0.01
DDX54-206ENST00000549271 NUDT12Q9BQG2 462 aa15.14■□□□□ 0.01
DDX54-206ENST00000549271 RAPGEFL1Q9UHV5 662 aa15.14■□□□□ 0.01
DDX54-206ENST00000549271 GAKO14976 1311 aa15.14■□□□□ 0.01
DDX54-206ENST00000549271 RLFQ13129 1914 aa15.13■□□□□ 0.01
DDX54-206ENST00000549271 TBC1D12O60347 775 aa15.13■□□□□ 0.01
DDX54-206ENST00000549271 CIAO1O76071 339 aa15.13■□□□□ 0.01
DDX54-206ENST00000549271 ZKSCAN1P17029 563 aaPredicted RBP15.13■□□□□ 0.01
DDX54-206ENST00000549271 RARSP54136 660 aaKnown RBP15.13■□□□□ 0.01
DDX54-206ENST00000549271 HMGCS2P54868 508 aa15.13■□□□□ 0.01
DDX54-206ENST00000549271 SHHQ15465 462 aa15.13■□□□□ 0.01
DDX54-206ENST00000549271 SH3D19Q5HYK7 790 aa15.13■□□□□ 0.01
DDX54-206ENST00000549271 ZNF280CQ8ND82 737 aa15.13■□□□□ 0.01
DDX54-206ENST00000549271 DDX4Q9NQI0 724 aaKnown RBP15.13■□□□□ 0.01
DDX54-206ENST00000549271 NOB1Q9ULX3 412 aaKnown RBP15.13■□□□□ 0.01
DDX54-206ENST00000549271 FOSL2P15408 326 aa15.12■□□□□ 0.01
DDX54-206ENST00000549271 PLA2G5P39877 138 aa15.12■□□□□ 0.01
DDX54-206ENST00000549271 SMAD3P84022 425 aaKnown RBP15.12■□□□□ 0.01
DDX54-206ENST00000549271 TJAP1Q5JTD0 557 aa15.12■□□□□ 0.01
DDX54-206ENST00000549271 C9orf50Q5SZB4 431 aa15.12■□□□□ 0.01
DDX54-206ENST00000549271 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
DDX54-206ENST00000549271 SENP6Q9GZR1 1112 aaPredicted RBP15.12■□□□□ 0.01
DDX54-206ENST00000549271 HDAC5Q9UQL6 1122 aa15.12■□□□□ 0.01
DDX54-206ENST00000549271 NCOR1O75376 2440 aa15.11■□□□□ 0.01
DDX54-206ENST00000549271 UBTFL1P0CB47 393 aaPredicted RBP15.11■□□□□ 0.01
DDX54-206ENST00000549271 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDX54-206ENST00000549271 CCL14Q16627 93 aa15.11■□□□□ 0.01
DDX54-206ENST00000549271 OSBPL5Q9H0X9 879 aaPredicted RBP15.11■□□□□ 0.01
DDX54-206ENST00000549271 TXNRD2Q9NNW7 524 aa15.11■□□□□ 0.01
DDX54-206ENST00000549271 SEMA3EO15041 775 aa15.1■□□□□ 0.01
DDX54-206ENST00000549271 PEX10O60683 326 aa15.1■□□□□ 0.01
DDX54-206ENST00000549271 MORN1Q5T089 497 aa15.1■□□□□ 0.01
DDX54-206ENST00000549271 GPRC5AQ8NFJ5 357 aa15.1■□□□□ 0.01
DDX54-206ENST00000549271 CEP126Q9P2H0 1117 aa15.1■□□□□ 0.01
DDX54-206ENST00000549271 BDP1A6H8Y1 2624 aa15.1■□□□□ 0.01
DDX54-206ENST00000549271 FAM196BA6NMK8 535 aa15.09■□□□□ 0.01
DDX54-206ENST00000549271 MAPK4P31152 587 aa15.09■□□□□ 0.01
DDX54-206ENST00000549271 HOXA7P31268 230 aaPredicted RBP15.09■□□□□ 0.01
DDX54-206ENST00000549271 IL15P40933 162 aaPredicted RBP15.09■□□□□ 0.01
DDX54-206ENST00000549271 PDE3AQ14432 1141 aa15.09■□□□□ 0.01
DDX54-206ENST00000549271 ATP2B3Q16720 1220 aa15.09■□□□□ 0.01
DDX54-206ENST00000549271 USP38Q8NB14 1042 aa15.09■□□□□ 0.01
DDX54-206ENST00000549271 FAM163AQ96GL9 167 aaPredicted RBP15.09■□□□□ 0.01
DDX54-206ENST00000549271 P2RX7Q99572 595 aaKnown RBP15.09■□□□□ 0.01
DDX54-206ENST00000549271 API5Q9BZZ5 524 aaKnown RBP15.09■□□□□ 0.01
DDX54-206ENST00000549271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.09■□□□□ 0.01
DDX54-206ENST00000549271 COPRSQ9NQ92 184 aa15.09■□□□□ 0.01
DDX54-206ENST00000549271 GNL3LQ9NVN8 582 aaKnown RBP15.09■□□□□ 0.01
DDX54-206ENST00000549271 PRKAG2Q9UGJ0 569 aa15.09■□□□□ 0.01
DDX54-206ENST00000549271 TMEM265A0A087WTH1 108 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms