RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CANXP27824 592 aaKnown RBP5.86□□□□□ -1.47
SCAF11-212ENST00000549162 CHRNDQ07001 517 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 UBE2Q2Q8WVN8 375 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 SETDB2Q96T68 719 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 SPZ1Q9BXG8 430 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 GREM2Q9H772 168 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 NPDC1Q9NQX5 325 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-212ENST00000549162 RABGAP1Q9Y3P9 1069 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 PASKQ96RG2 1323 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 MCAMP43121 646 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 NBPF11Q86T75 865 aa5.86□□□□□ -1.47
SCAF11-212ENST00000549162 CALM1P0DP23 149 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 CALM2P0DP24 149 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 CALM3P0DP25 149 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 TKFCQ3LXA3 575 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 XRRA1Q6P2D8 792 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 ARHGAP27Q6ZUM4 889 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 ANKRD18AQ8IVF6 992 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 MSL3Q8N5Y2 521 aaKnown RBP5.85□□□□□ -1.47
SCAF11-212ENST00000549162 XAGE2Q96GT9 111 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 NLRP3Q96P20 1036 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 SENP7Q9BQF6 1050 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 BCL2L13Q9BXK5 485 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 FAM124BQ9H5Z6 455 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-212ENST00000549162 NYAP2Q9P242 653 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 GPR37L1O60883 481 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 CCDC93Q567U6 631 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 ZNF804AQ7Z570 1209 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 GIPC2Q8TF65 315 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 GLT8D2Q9H1C3 349 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 PAG1Q9NWQ8 432 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 PPP1R1BQ9UD71 204 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-212ENST00000549162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-212ENST00000549162 ATG7O95352 703 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 SLC39A6Q13433 755 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 CCDC102BQ68D86 513 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 SPATA5Q8NB90 893 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 KCNH4Q9UQ05 1017 aa5.85□□□□□ -1.47
SCAF11-212ENST00000549162 A0A1B0GUL7 405 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 B3GNT9Q6UX72 402 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 PLPP6Q8IY26 295 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 CCDC17Q96LX7 622 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.84□□□□□ -1.47
SCAF11-212ENST00000549162 CHD5Q8TDI0 1954 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 COL4A2P08572 1712 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.84□□□□□ -1.47
SCAF11-212ENST00000549162 CYP3A4P08684 503 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 TRAPPC10P48553 1259 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 NTRK3Q16288 839 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 PHLDB3Q6NSJ2 640 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 C3orf67Q6ZVT6 689 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 CNBD1Q8NA66 436 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 KIF12Q96FN5 646 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 TFIP11Q9UBB9 837 aaKnown RBP5.84□□□□□ -1.47
SCAF11-212ENST00000549162 ATP2B3Q16720 1220 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 QPCTQ16769 361 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 C12orf60Q5U649 245 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 LMBR1LQ6UX01 489 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 IGDCC4Q8TDY8 1250 aa5.84□□□□□ -1.47
SCAF11-212ENST00000549162 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.84□□□□□ -1.47
SCAF11-212ENST00000549162 RBM28Q9NW13 759 aaKnown RBP5.84□□□□□ -1.47
SCAF11-212ENST00000549162 LDHCP07864 332 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 IFIT1P09914 478 aaKnown RBP5.83□□□□□ -1.48
SCAF11-212ENST00000549162 U2AF2P26368 475 aaKnown RBP eCLIP5.83□□□□□ -1.486e-8■■■■□ 23.6
SCAF11-212ENST00000549162 USP50Q70EL3 339 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-212ENST00000549162 RUFY3Q7L099 469 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 ITPRIPQ8IWB1 547 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 RSPH1Q8WYR4 309 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 TEPSINQ96N21 525 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 RIOX1Q9H6W3 641 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 SRGAP3O43295 1099 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 RPS6KB1P23443 525 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 IGHMBP2P38935 993 aaKnown RBP5.83□□□□□ -1.48
SCAF11-212ENST00000549162 PRPHP41219 470 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 VAC14Q08AM6 782 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 TFCP2Q12800 502 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 CBLBQ13191 982 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 RAB3GAP1Q15042 981 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 CWF19L2Q2TBE0 894 aaKnown RBP5.83□□□□□ -1.48
SCAF11-212ENST00000549162 NT5DC1Q5TFE4 455 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 NUTM2GQ5VZR2 741 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 NAP1L4Q99733 375 aaKnown RBP5.83□□□□□ -1.48
SCAF11-212ENST00000549162 GNL3LQ9NVN8 582 aaKnown RBP5.83□□□□□ -1.48
SCAF11-212ENST00000549162 USP25Q9UHP3 1055 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 GSG1L2A8MUP6 293 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 PHF20L1A8MW92 1017 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 PSMA5P28066 241 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 GPSM2P81274 684 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 GPC2Q8N158 579 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 NEDD1Q8NHV4 660 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 DCAF4Q8WV16 495 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 BPIFA3Q9BQP9 254 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 BCL11AQ9H165 835 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 CD209Q9NNX6 404 aa5.83□□□□□ -1.48
SCAF11-212ENST00000549162 SH2B2O14492 632 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-212ENST00000549162 KDM4AO75164 1064 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 ST3GAL1Q11201 340 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 TRAF1Q13077 416 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 G3BP1Q13283 466 aaKnown RBP eCLIP5.82□□□□□ -1.48
SCAF11-212ENST00000549162 CSPP1Q1MSJ5 1256 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms