RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 MYH2Q9UKX2 1941 aa19.25■□□□□ 0.67
CHMP1A-206ENST00000549139 A0A0G2JLL6 359 aaPredicted RBP19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 EVI5O60447 810 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 INHAP05111 366 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 UQCRFS1P1P0C7P4 283 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 ELNP15502 786 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 CAPN2P17655 700 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 FLT3LGP49771 235 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 IRF5Q13568 498 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 RASGRF1Q13972 1273 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 DIXDC1Q155Q3 683 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 CCDC158Q5M9N0 1113 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 PRRT2Q7Z6L0 340 aaPredicted RBP19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 ZFPM1Q8IX07 1006 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 ZGPATQ8N5A5 531 aaKnown RBP19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 DBNDD2Q9BQY9 259 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 CRISPLD2Q9H0B8 497 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 PAK6Q9NQU5 681 aaPredicted RBP19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 STAP2Q9UGK3 403 aa19.24■□□□□ 0.67
CHMP1A-206ENST00000549139 AAMPQ13685 434 aa19.23■□□□□ 0.67
CHMP1A-206ENST00000549139 ZNF512BQ96KM6 892 aaPredicted RBP19.23■□□□□ 0.67
CHMP1A-206ENST00000549139 CCDC8Q9H0W5 538 aaPredicted RBP19.23■□□□□ 0.67
CHMP1A-206ENST00000549139 PCDHB15Q9Y5E8 787 aa19.23■□□□□ 0.67
CHMP1A-206ENST00000549139 FASTKD5Q7L8L6 764 aaKnown RBP19.22■□□□□ 0.67
CHMP1A-206ENST00000549139 CLASRPQ8N2M8 674 aaKnown RBP19.22■□□□□ 0.67
CHMP1A-206ENST00000549139 DEFB118Q96PH6 123 aa19.22■□□□□ 0.67
CHMP1A-206ENST00000549139 DCTPP1Q9H773 170 aa19.22■□□□□ 0.67
CHMP1A-206ENST00000549139 HMG20BQ9P0W2 317 aa19.22■□□□□ 0.67
CHMP1A-206ENST00000549139 DBNLQ9UJU6 430 aaKnown RBP19.22■□□□□ 0.67
CHMP1A-206ENST00000549139 SLC45A1Q9Y2W3 748 aa19.22■□□□□ 0.67
CHMP1A-206ENST00000549139 AFG3L2Q9Y4W6 797 aa19.22■□□□□ 0.67
CHMP1A-206ENST00000549139 PHIPQ8WWQ0 1821 aa19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 TFRCP02786 760 aaKnown RBP19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 LDHBP07195 334 aaKnown RBP19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 PTPRAP18433 802 aa19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 PRDX5P30044 214 aa19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 TTC39AQ5SRH9 613 aa19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 SCYL3Q8IZE3 742 aa19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 SPATA5Q8NB90 893 aa19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 IL1RAPL2Q9NP60 686 aa19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 USP40Q9NVE5 1235 aa19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 MYO5AQ9Y4I1 1855 aaKnown RBP19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 ZHX2Q9Y6X8 837 aa19.21■□□□□ 0.67
CHMP1A-206ENST00000549139 MCAMP43121 646 aa19.2■□□□□ 0.66
CHMP1A-206ENST00000549139 MAP3K10Q02779 954 aa19.2■□□□□ 0.66
CHMP1A-206ENST00000549139 SPTY2D1Q68D10 685 aaPredicted RBP19.2■□□□□ 0.66
CHMP1A-206ENST00000549139 SH3BP5LQ7L8J4 393 aa19.2■□□□□ 0.66
CHMP1A-206ENST00000549139 AACSQ86V21 672 aa19.2■□□□□ 0.66
CHMP1A-206ENST00000549139 PAWRQ96IZ0 340 aaKnown RBP19.2■□□□□ 0.66
CHMP1A-206ENST00000549139 GDF15Q99988 308 aa19.2■□□□□ 0.66
CHMP1A-206ENST00000549139 DOCK2Q92608 1830 aa19.2■□□□□ 0.66
CHMP1A-206ENST00000549139 UNC80Q8N2C7 3258 aa19.2■□□□□ 0.66
CHMP1A-206ENST00000549139 APBB1O00213 710 aa19.19■□□□□ 0.66
CHMP1A-206ENST00000549139 TNPO2O14787 897 aaKnown RBP19.19■□□□□ 0.66
CHMP1A-206ENST00000549139 BMP8BP34820 402 aa19.19■□□□□ 0.66
CHMP1A-206ENST00000549139 IDI2Q9BXS1 227 aa19.19■□□□□ 0.66
CHMP1A-206ENST00000549139 TLR7Q9NYK1 1049 aaKnown RBP19.19■□□□□ 0.66
CHMP1A-206ENST00000549139 RFX7Q2KHR2 1363 aa19.19■□□□□ 0.66
CHMP1A-206ENST00000549139 GPR153Q6NV75 609 aa19.18■□□□□ 0.66
CHMP1A-206ENST00000549139 DIS3LQ8TF46 1054 aaKnown RBP19.18■□□□□ 0.66
CHMP1A-206ENST00000549139 LRRCC1Q9C099 1032 aa19.18■□□□□ 0.66
CHMP1A-206ENST00000549139 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
CHMP1A-206ENST00000549139 ENTPD3O75355 529 aa19.17■□□□□ 0.66
CHMP1A-206ENST00000549139 IFIT2P09913 472 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-206ENST00000549139 SLURP2P0DP57 97 aa19.17■□□□□ 0.66
CHMP1A-206ENST00000549139 RGS3P49796 1198 aa19.17■□□□□ 0.66
CHMP1A-206ENST00000549139 MNX1P50219 401 aaPredicted RBP19.17■□□□□ 0.66
CHMP1A-206ENST00000549139 PI16Q6UXB8 463 aa19.17■□□□□ 0.66
CHMP1A-206ENST00000549139 GADL1Q6ZQY3 521 aa19.17■□□□□ 0.66
CHMP1A-206ENST00000549139 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
CHMP1A-206ENST00000549139 PICK1Q9NRD5 415 aa19.17■□□□□ 0.66
CHMP1A-206ENST00000549139 DOCK1Q14185 1865 aa19.16■□□□□ 0.66
CHMP1A-206ENST00000549139 NECAB2Q7Z6G3 386 aa19.16■□□□□ 0.66
CHMP1A-206ENST00000549139 SLF2Q8IX21 1173 aa19.16■□□□□ 0.66
CHMP1A-206ENST00000549139 IGSF3O75054 1194 aa19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 TBC1D9Q6ZT07 1266 aa19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 ANKRD13CQ8N6S4 541 aa19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 EXOC6Q8TAG9 804 aa19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 FAM163AQ96GL9 167 aaPredicted RBP19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 SNRKQ9NRH2 765 aa19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 AGTPBP1Q9UPW5 1226 aa19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 GAKO14976 1311 aa19.15■□□□□ 0.66
CHMP1A-206ENST00000549139 DDTLA6NHG4 134 aaPredicted RBP19.14■□□□□ 0.65
CHMP1A-206ENST00000549139 CTNND1O60716 968 aaKnown RBP19.14■□□□□ 0.65
CHMP1A-206ENST00000549139 FAM110CQ1W6H9 321 aa19.14■□□□□ 0.65
CHMP1A-206ENST00000549139 DZIP1Q86YF9 867 aaKnown RBP19.14■□□□□ 0.65
CHMP1A-206ENST00000549139 ANKLE1Q8NAG6 615 aa19.14■□□□□ 0.65
CHMP1A-206ENST00000549139 COA7Q96BR5 231 aa19.14■□□□□ 0.65
CHMP1A-206ENST00000549139 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.14■□□□□ 0.65
CHMP1A-206ENST00000549139 TRIM75PA6NK02 468 aa19.13■□□□□ 0.65
CHMP1A-206ENST00000549139 CYP2E1P05181 493 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-206ENST00000549139 ZAP70P43403 619 aa19.13■□□□□ 0.65
CHMP1A-206ENST00000549139 HDAC1Q13547 482 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-206ENST00000549139 LRIT3Q3SXY7 679 aa19.13■□□□□ 0.65
CHMP1A-206ENST00000549139 TREML2Q5T2D2 321 aa19.13■□□□□ 0.65
CHMP1A-206ENST00000549139 CCDC84Q86UT8 332 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-206ENST00000549139 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.13■□□□□ 0.65
CHMP1A-206ENST00000549139 DDX4Q9NQI0 724 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms