RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CCDC102BQ68D86 513 aa16.84■□□□□ 0.29
CDX2-202ENST00000548877 MTMR10Q9NXD2 777 aa16.84■□□□□ 0.29
CDX2-202ENST00000548877 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
CDX2-202ENST00000548877 ATAD5Q96QE3 1844 aa16.84■□□□□ 0.29
CDX2-202ENST00000548877 MROH7-TTC4A0A0A0MT08 1334 aa16.83■□□□□ 0.28
CDX2-202ENST00000548877 PABPC4Q13310 644 aaKnown RBP eCLIP16.83■□□□□ 0.28
CDX2-202ENST00000548877 SPTY2D1Q68D10 685 aaPredicted RBP16.83■□□□□ 0.28
CDX2-202ENST00000548877 TDHQ8IZJ6 230 aa16.83■□□□□ 0.28
CDX2-202ENST00000548877 ZNF280CQ8ND82 737 aa16.83■□□□□ 0.28
CDX2-202ENST00000548877 C11orf49Q9H6J7 331 aa16.83■□□□□ 0.28
CDX2-202ENST00000548877 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.83■□□□□ 0.28
CDX2-202ENST00000548877 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.28
CDX2-202ENST00000548877 ZMYND8Q9ULU4 1186 aaPredicted RBP16.83■□□□□ 0.28
CDX2-202ENST00000548877 UNC80Q8N2C7 3258 aa16.82■□□□□ 0.28
CDX2-202ENST00000548877 XRCC5P13010 732 aaKnown RBP16.82■□□□□ 0.28
CDX2-202ENST00000548877 BTDP43251 543 aa16.82■□□□□ 0.28
CDX2-202ENST00000548877 MAGEA10P43363 369 aaPredicted RBP16.82■□□□□ 0.28
CDX2-202ENST00000548877 SPP2Q13103 211 aa16.82■□□□□ 0.28
CDX2-202ENST00000548877 RASGRF1Q13972 1273 aa16.82■□□□□ 0.28
CDX2-202ENST00000548877 CCDC84Q86UT8 332 aaPredicted RBP16.82■□□□□ 0.28
CDX2-202ENST00000548877 DZIP1Q86YF9 867 aaKnown RBP16.82■□□□□ 0.28
CDX2-202ENST00000548877 SSH1Q8WYL5 1049 aa16.82■□□□□ 0.28
CDX2-202ENST00000548877 COPRSQ9NQ92 184 aa16.82■□□□□ 0.28
CDX2-202ENST00000548877 COL6A1P12109 1028 aa16.81■□□□□ 0.28
CDX2-202ENST00000548877 ADORA1P30542 326 aa16.81■□□□□ 0.28
CDX2-202ENST00000548877 TRIM32Q13049 653 aa16.81■□□□□ 0.28
CDX2-202ENST00000548877 TRIB2Q92519 343 aa16.81■□□□□ 0.28
CDX2-202ENST00000548877 SIL1Q9H173 461 aa16.81■□□□□ 0.28
CDX2-202ENST00000548877 ASCC2Q9H1I8 757 aaPredicted RBP16.81■□□□□ 0.28
CDX2-202ENST00000548877 PFASO15067 1338 aa16.8■□□□□ 0.28
CDX2-202ENST00000548877 CAP2P40123 477 aa16.8■□□□□ 0.28
CDX2-202ENST00000548877 PICALMQ13492 652 aa16.8■□□□□ 0.28
CDX2-202ENST00000548877 Q7L0L9 218 aa16.8■□□□□ 0.28
CDX2-202ENST00000548877 ZNF384Q8TF68 577 aa16.8■□□□□ 0.28
CDX2-202ENST00000548877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDX2-202ENST00000548877 USP17L5A8MUK1 530 aa16.79■□□□□ 0.28
CDX2-202ENST00000548877 HOXA7P31268 230 aaPredicted RBP16.79■□□□□ 0.28
CDX2-202ENST00000548877 HMGCS2P54868 508 aa16.79■□□□□ 0.28
CDX2-202ENST00000548877 MECOMQ03112 1051 aa16.79■□□□□ 0.28
CDX2-202ENST00000548877 ALDH1L2Q3SY69 923 aa16.79■□□□□ 0.28
CDX2-202ENST00000548877 TRMT44Q8IYL2 757 aaKnown RBP16.79■□□□□ 0.28
CDX2-202ENST00000548877 MIER1Q8N108 512 aa16.79■□□□□ 0.28
CDX2-202ENST00000548877 WDR18Q9BV38 432 aa16.79■□□□□ 0.28
CDX2-202ENST00000548877 ABCF2Q9UG63 623 aa16.79■□□□□ 0.28
CDX2-202ENST00000548877 UBTFL1P0CB47 393 aaPredicted RBP16.78■□□□□ 0.28
CDX2-202ENST00000548877 SYN1P17600 705 aa16.78■□□□□ 0.28
CDX2-202ENST00000548877 RRP1BQ14684 758 aaKnown RBP16.78■□□□□ 0.28
CDX2-202ENST00000548877 FAM109BQ6ICB4 259 aaPredicted RBP16.78■□□□□ 0.28
CDX2-202ENST00000548877 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
CDX2-202ENST00000548877 SOCS4Q8WXH5 440 aa16.78■□□□□ 0.28
CDX2-202ENST00000548877 USP6NLQ92738 828 aa16.78■□□□□ 0.28
CDX2-202ENST00000548877 UBE2OQ9C0C9 1292 aaKnown RBP16.78■□□□□ 0.28
CDX2-202ENST00000548877 HERC5Q9UII4 1024 aaKnown RBP16.78■□□□□ 0.28
CDX2-202ENST00000548877 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
CDX2-202ENST00000548877 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
CDX2-202ENST00000548877 FAM196BA6NMK8 535 aa16.77■□□□□ 0.28
CDX2-202ENST00000548877 LDHCP07864 332 aa16.77■□□□□ 0.28
CDX2-202ENST00000548877 TIMM10P62072 90 aa16.77■□□□□ 0.28
CDX2-202ENST00000548877 AS3MTQ9HBK9 375 aa16.77■□□□□ 0.28
CDX2-202ENST00000548877 DNAH12Q6ZR08 3092 aa16.76■□□□□ 0.27
CDX2-202ENST00000548877 SIPA1L1O43166 1804 aa16.76■□□□□ 0.27
CDX2-202ENST00000548877 POTEB2H3BUK9 544 aa16.76■□□□□ 0.27
CDX2-202ENST00000548877 PRKAR2AP13861 404 aaKnown RBP16.76■□□□□ 0.27
CDX2-202ENST00000548877 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
CDX2-202ENST00000548877 LHX8Q68G74 356 aa16.76■□□□□ 0.27
CDX2-202ENST00000548877 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
CDX2-202ENST00000548877 NSUN4Q96CB9 384 aaKnown RBP16.76■□□□□ 0.27
CDX2-202ENST00000548877 NUDT12Q9BQG2 462 aa16.76■□□□□ 0.27
CDX2-202ENST00000548877 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
CDX2-202ENST00000548877 A0A1B0GUL7 405 aa16.75■□□□□ 0.27
CDX2-202ENST00000548877 E9PSI1 815 aa16.75■□□□□ 0.27
CDX2-202ENST00000548877 CYP2B6P20813 491 aa16.75■□□□□ 0.27
CDX2-202ENST00000548877 BACE1P56817 501 aa16.75■□□□□ 0.27
CDX2-202ENST00000548877 GSTO1P78417 241 aa16.75■□□□□ 0.27
CDX2-202ENST00000548877 XAGE2Q96GT9 111 aa16.75■□□□□ 0.27
CDX2-202ENST00000548877 COL25A1Q9BXS0 654 aaPredicted RBP16.75■□□□□ 0.27
CDX2-202ENST00000548877 GINM1Q9NU53 330 aa16.75■□□□□ 0.27
CDX2-202ENST00000548877 AKAP2Q9Y2D5 859 aa16.75■□□□□ 0.27
CDX2-202ENST00000548877 C19orf81C9J6K1 198 aa16.74■□□□□ 0.27
CDX2-202ENST00000548877 ANP32CO43423 234 aa16.74■□□□□ 0.27
CDX2-202ENST00000548877 ASNSP08243 561 aa16.74■□□□□ 0.27
CDX2-202ENST00000548877 MAPK4P31152 587 aa16.74■□□□□ 0.27
CDX2-202ENST00000548877 HERVK_113P62684 666 aa16.74■□□□□ 0.27
CDX2-202ENST00000548877 CACNB2Q08289 660 aaPredicted RBP16.74■□□□□ 0.27
CDX2-202ENST00000548877 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
CDX2-202ENST00000548877 P2RX7Q99572 595 aaKnown RBP16.74■□□□□ 0.27
CDX2-202ENST00000548877 TXNRD2Q9NNW7 524 aa16.74■□□□□ 0.27
CDX2-202ENST00000548877 HMG20BQ9P0W2 317 aa16.74■□□□□ 0.27
CDX2-202ENST00000548877 PI4KBQ9UBF8 816 aa16.74■□□□□ 0.27
CDX2-202ENST00000548877 FRMPD3Q5JV73 1810 aa16.73■□□□□ 0.27
CDX2-202ENST00000548877 IRX3P78415 501 aaPredicted RBP16.73■□□□□ 0.27
CDX2-202ENST00000548877 LRRC26Q2I0M4 334 aa16.73■□□□□ 0.27
CDX2-202ENST00000548877 MORN1Q5T089 497 aa16.73■□□□□ 0.27
CDX2-202ENST00000548877 GTF3C2Q8WUA4 911 aaPredicted RBP16.73■□□□□ 0.27
CDX2-202ENST00000548877 DHX36Q9H2U1 1008 aaKnown RBP16.73■□□□□ 0.27
CDX2-202ENST00000548877 RBPJLQ9UBG7 517 aa16.73■□□□□ 0.27
CDX2-202ENST00000548877 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
CDX2-202ENST00000548877 SLFN5Q08AF3 891 aa16.72■□□□□ 0.27
CDX2-202ENST00000548877 MTX1Q13505 466 aa16.72■□□□□ 0.27
CDX2-202ENST00000548877 MTMR2Q13614 643 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms