RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 GOLGA8HP0CJ92 632 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 CMA1P23946 247 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 SLC39A14Q15043 492 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 HSP90B2PQ58FF3 399 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 CCDC178Q5BJE1 867 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 NOSTRINQ8IVI9 506 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 IGSF22Q8N9C0 903 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 RNF41Q9H4P4 317 aaPredicted RBP16.15■□□□□ 0.18
CACNB3-209ENST00000548860 SPTLC3Q9NUV7 552 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 LMAN1P49257 510 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 LPIN2Q92539 896 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 CSRNP2Q9H175 543 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 TNKSO95271 1327 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 RABL6Q3YEC7 729 aaPredicted RBP16.15■□□□□ 0.18
CACNB3-209ENST00000548860 ARMCX5Q6P1M9 558 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 GIGYF2Q6Y7W6 1299 aaKnown RBP16.15■□□□□ 0.18
CACNB3-209ENST00000548860 CEP131Q9UPN4 1083 aa16.15■□□□□ 0.18
CACNB3-209ENST00000548860 SETD1AO15047 1707 aaKnown RBP16.14■□□□□ 0.17
CACNB3-209ENST00000548860 PCCAP05165 728 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-209ENST00000548860 UBA7P41226 1012 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 GPR101Q96P66 508 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-209ENST00000548860 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-209ENST00000548860 C3P01024 1663 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 DDB1Q16531 1140 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 SHC4Q6S5L8 630 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 LRRN4CLQ8ND94 238 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 DEF6Q9H4E7 631 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 ZCCHC17Q9NP64 241 aaKnown RBP16.14■□□□□ 0.17
CACNB3-209ENST00000548860 AXDND1Q5T1B0 1012 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-209ENST00000548860 KRBA2Q6ZNG9 492 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 ERO1AQ96HE7 468 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.14■□□□□ 0.17
CACNB3-209ENST00000548860 OGFRQ9NZT2 677 aa16.14■□□□□ 0.17
CACNB3-209ENST00000548860 MTF1Q14872 753 aa16.13■□□□□ 0.17
CACNB3-209ENST00000548860 SMAP1Q8IYB5 467 aaPredicted RBP16.13■□□□□ 0.17
CACNB3-209ENST00000548860 CDK5RAP3Q96JB5 506 aa16.13■□□□□ 0.17
CACNB3-209ENST00000548860 PATL2C9JE40 543 aaKnown RBP16.13■□□□□ 0.17
CACNB3-209ENST00000548860 CCP110O43303 1012 aa16.13■□□□□ 0.17
CACNB3-209ENST00000548860 SUSD4Q5VX71 490 aa16.13■□□□□ 0.17
CACNB3-209ENST00000548860 MB21D2Q8IYB1 491 aaPredicted RBP16.13■□□□□ 0.17
CACNB3-209ENST00000548860 FANCBQ8NB91 859 aa16.13■□□□□ 0.17
CACNB3-209ENST00000548860 TRIM47Q96LD4 638 aa16.13■□□□□ 0.17
CACNB3-209ENST00000548860 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
CACNB3-209ENST00000548860 SLF1Q9BQI6 1058 aa16.13■□□□□ 0.17
CACNB3-209ENST00000548860 ZMYM6O95789 1325 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 ERVV-2B6SEH9 535 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 KIF2AO00139 706 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 ARID5AQ03989 594 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 PICALMQ13492 652 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 KMT5BQ4FZB7 885 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 NOM1Q5C9Z4 860 aaKnown RBP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 ZNF444Q8N0Y2 327 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 MROH7-TTC4A0A0A0MT08 1334 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 MAP3K15Q6ZN16 1313 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 MPHOSPH10O00566 681 aaKnown RBP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 MRPS25P82663 173 aaKnown RBP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 BMS1Q14692 1282 aaKnown RBP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 JAKMIP3Q5VZ66 844 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 CENPHQ9H3R5 247 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 KAT14Q9H8E8 782 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 NPHP4O75161 1426 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 SH2B2O14492 632 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 PLEKHA8P1O95397 391 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 STAT6P42226 847 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 TMEM87BQ96K49 555 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 ATG3Q9NT62 314 aa16.12■□□□□ 0.17
CACNB3-209ENST00000548860 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.12■□□□□ 0.17
CACNB3-209ENST00000548860 CHRNDQ07001 517 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 PPARAQ07869 468 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 STRBPQ96SI9 672 aaKnown RBP16.11■□□□□ 0.17
CACNB3-209ENST00000548860 CDC5LQ99459 802 aaKnown RBP16.11■□□□□ 0.17
CACNB3-209ENST00000548860 KRT2P35908 639 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 UBXN1Q04323 297 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 RAD51AP2Q09MP3 1159 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 BRINP3Q76B58 766 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 CNNM2Q9H8M5 875 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 POLR3EQ9NVU0 708 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 MON2Q7Z3U7 1717 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 SOWAHDA6NJG2 315 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 CUTAO60888 179 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 MTIF2P46199 727 aaKnown RBP16.11■□□□□ 0.17
CACNB3-209ENST00000548860 ETF1P62495 437 aaKnown RBP16.11■□□□□ 0.17
CACNB3-209ENST00000548860 NKX2-3Q8TAU0 364 aa16.11■□□□□ 0.17
CACNB3-209ENST00000548860 PDE4BQ07343 736 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 GPS2Q13227 327 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 PTPROQ16827 1216 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 NEK11Q8NG66 645 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 UBR1Q8IWV7 1749 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 ZPR1O75312 459 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 CYP2D6P10635 497 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 PPP2R3AQ06190 1150 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 E4F1Q66K89 784 aaPredicted RBP16.1■□□□□ 0.17
CACNB3-209ENST00000548860 WDR17Q8IZU2 1322 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 ADGRL3Q9HAR2 1447 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 RNASE9P60153 205 aaKnown RBP16.1■□□□□ 0.17
CACNB3-209ENST00000548860 CCZ1BP86790 482 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 CCZ1P86791 482 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms