RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 NBPF12Q5TAG4 269 aaPredicted RBP6.48□□□□□ -1.37
PTPRB-206ENST00000548122 PDILTQ8N807 584 aa6.48□□□□□ -1.37
PTPRB-206ENST00000548122 PAGR1Q9BTK6 254 aa6.48□□□□□ -1.37
PTPRB-206ENST00000548122 RNF41Q9H4P4 317 aaPredicted RBP6.48□□□□□ -1.37
PTPRB-206ENST00000548122 CREBZFQ9NS37 354 aa6.48□□□□□ -1.37
PTPRB-206ENST00000548122 STK25O00506 426 aa6.48□□□□□ -1.37
PTPRB-206ENST00000548122 FMNL1O95466 1100 aaPredicted RBP6.48□□□□□ -1.37
PTPRB-206ENST00000548122 DYNLL1P63167 89 aaKnown RBP6.48□□□□□ -1.37
PTPRB-206ENST00000548122 AKAP17AQ02040 695 aaKnown RBP6.48□□□□□ -1.37
PTPRB-206ENST00000548122 BRD3Q15059 726 aa6.48□□□□□ -1.37
PTPRB-206ENST00000548122 NAP1L4Q99733 375 aaKnown RBP6.48□□□□□ -1.37
PTPRB-206ENST00000548122 PALD1Q9ULE6 856 aa6.48□□□□□ -1.37
PTPRB-206ENST00000548122 FAM205AQ6ZU69 1335 aa6.48□□□□□ -1.37
PTPRB-206ENST00000548122 CCL15-CCL14A0A0B4J2E2 113 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 ZNF213O14771 459 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 CLCN1P35523 988 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 CCL15Q16663 113 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 PPP4R3BQ5MIZ7 849 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 CDC42EP5Q6NZY7 148 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 IQCA1Q86XH1 822 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 CCDC82Q8N4S0 544 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 FAM151AQ8WW52 585 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 APPBP2Q92624 585 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 KDM3BQ7LBC6 1761 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 GDF11O95390 407 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 OSBPP22059 807 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 HAND2P61296 217 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 FKBP1BP68106 108 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 FAM160A1Q05DH4 1040 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 SDR42E1Q8WUS8 393 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 SERPINB13Q9UIV8 391 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 FAM196BA6NMK8 535 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 PDE1AP54750 535 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 FKBP1AP62942 108 aaKnown RBP6.47□□□□□ -1.37
PTPRB-206ENST00000548122 SNAPC2Q13487 334 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 ABCB5Q2M3G0 1257 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 C15orf52Q6ZUT6 534 aaKnown RBP6.47□□□□□ -1.37
PTPRB-206ENST00000548122 KBTBD3Q8NAB2 608 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 SH3RF3Q8TEJ3 882 aaPredicted RBP6.47□□□□□ -1.37
PTPRB-206ENST00000548122 SPOCK2Q92563 424 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 ANTXR1Q9H6X2 564 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 ZFYVE28Q9HCC9 887 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 PIH1D3Q9NQM4 214 aaKnown RBP6.47□□□□□ -1.37
PTPRB-206ENST00000548122 TSKSQ9UJT2 592 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 PNMA3Q9UL41 463 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 TAF1LQ8IZX4 1826 aa6.47□□□□□ -1.37
PTPRB-206ENST00000548122 ASNSP08243 561 aa6.46□□□□□ -1.37
PTPRB-206ENST00000548122 HDAC1Q13547 482 aaPredicted RBP6.46□□□□□ -1.37
PTPRB-206ENST00000548122 SPDYE2Q495Y8 402 aa6.46□□□□□ -1.37
PTPRB-206ENST00000548122 MOB2Q70IA6 237 aa6.46□□□□□ -1.37
PTPRB-206ENST00000548122 FOXP4Q8IVH2 680 aaPredicted RBP6.46□□□□□ -1.37
PTPRB-206ENST00000548122 ZDHHC15Q96MV8 337 aa6.46□□□□□ -1.37
PTPRB-206ENST00000548122 LRP5O75197 1615 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 MANSC4A6NHS7 340 aaPredicted RBP6.46□□□□□ -1.38
PTPRB-206ENST00000548122 USP17L12C9JPN9 530 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 USP17L21D6R901 530 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 ENTPD3O75355 529 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 ALDH1A1P00352 501 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 MFSD6Q6ZSS7 791 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 LAMB4A4D0S4 1761 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 PAPPAQ13219 1627 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 GPAA1O43292 621 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 REC8O95072 547 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 CETPP11597 493 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 FMR1Q06787 632 aaKnown RBP eCLIP6.46□□□□□ -1.38
PTPRB-206ENST00000548122 UTP14CQ5TAP6 766 aaKnown RBP6.46□□□□□ -1.38
PTPRB-206ENST00000548122 FAM177A1Q8N128 213 aaPredicted RBP6.46□□□□□ -1.38
PTPRB-206ENST00000548122 CERS5Q8N5B7 392 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 EP400Q96L91 3159 aa6.46□□□□□ -1.38
PTPRB-206ENST00000548122 N4BP2Q86UW6 1770 aaPredicted RBP6.46□□□□□ -1.38
PTPRB-206ENST00000548122 WDR33Q9C0J8 1336 aaKnown RBP6.46□□□□□ -1.38
PTPRB-206ENST00000548122 CYP2E1P05181 493 aaPredicted RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 FGFR2P21802 821 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 ARID4AP29374 1257 aaPredicted RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 GTF2A2P52657 109 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 KIF23Q02241 960 aaPredicted RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 SPP2Q13103 211 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 HAUS7Q99871 368 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 SLC24A3Q9HC58 644 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 ASTN2O75129 1339 aaPredicted RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 HOXD10P28358 340 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 CTCFP49711 727 aaPredicted RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 ZNF280AP59817 542 aaPredicted RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 MCMDC2Q4G0Z9 681 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 FASTKD5Q7L8L6 764 aaKnown RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 NUP133Q8WUM0 1156 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 BACH2Q9BYV9 841 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 FZD1Q9UP38 647 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 U3KPZ7 1027 aaPredicted RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 NUP98P52948 1817 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 SPDYE4A6NLX3 237 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 USP17L5A8MUK1 530 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 CDC45O75419 566 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 PRDM1O75626 825 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 ZSCAN20P17040 1043 aaPredicted RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 CPLX2Q6PUV4 134 aaKnown RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 ERO1BQ86YB8 467 aa6.45□□□□□ -1.38
PTPRB-206ENST00000548122 ZKSCAN4Q969J2 545 aaPredicted RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 NSUN4Q96CB9 384 aaKnown RBP6.45□□□□□ -1.38
PTPRB-206ENST00000548122 OPTNQ96CV9 577 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms