RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 ZMYND8Q9ULU4 1186 aaPredicted RBP11.76□□□□□ -0.53
CDK4-205ENST00000547853 ATAD5Q96QE3 1844 aa11.75□□□□□ -0.53
CDK4-205ENST00000547853 ADCY3O60266 1144 aa11.75□□□□□ -0.53
CDK4-205ENST00000547853 TPM2P07951 284 aa11.75□□□□□ -0.53
CDK4-205ENST00000547853 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
CDK4-205ENST00000547853 ZNF445P59923 1031 aa11.75□□□□□ -0.53
CDK4-205ENST00000547853 PPATQ06203 517 aa11.75□□□□□ -0.53
CDK4-205ENST00000547853 NEXNQ0ZGT2 675 aa11.75□□□□□ -0.53
CDK4-205ENST00000547853 GCKRQ14397 625 aa11.75□□□□□ -0.53
CDK4-205ENST00000547853 PLEKHM2Q8IWE5 1019 aa11.75□□□□□ -0.53
CDK4-205ENST00000547853 SIRT2Q8IXJ6 389 aa11.75□□□□□ -0.53
CDK4-205ENST00000547853 ANKRD18BA2A2Z9 1011 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 CAPN2P17655 700 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 INPP5BP32019 993 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 FLT3LGP49771 235 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 TERF1P54274 439 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 IRF5Q13568 498 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 NECAB2Q7Z6G3 386 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 TDRD7Q8NHU6 1098 aaKnown RBP11.74□□□□□ -0.53
CDK4-205ENST00000547853 PXYLP1Q8TE99 480 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 OSBPL3Q9H4L5 887 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 PRDM6Q9NQX0 595 aa11.74□□□□□ -0.53
CDK4-205ENST00000547853 RRP9O43818 475 aaKnown RBP11.73□□□□□ -0.53
CDK4-205ENST00000547853 NCOR1O75376 2440 aa11.73□□□□□ -0.53
CDK4-205ENST00000547853 BAG4O95429 457 aaKnown RBP11.73□□□□□ -0.53
CDK4-205ENST00000547853 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
CDK4-205ENST00000547853 CYP2C8P10632 490 aa11.73□□□□□ -0.53
CDK4-205ENST00000547853 SYN1P17600 705 aa11.73□□□□□ -0.53
CDK4-205ENST00000547853 CCDC30Q5VVM6 783 aa11.73□□□□□ -0.53
CDK4-205ENST00000547853 GPAT2Q6NUI2 795 aa11.73□□□□□ -0.53
CDK4-205ENST00000547853 FAM83AQ86UY5 434 aa11.73□□□□□ -0.53
CDK4-205ENST00000547853 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
CDK4-205ENST00000547853 USP26Q9BXU7 913 aa11.73□□□□□ -0.53
CDK4-205ENST00000547853 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDK4-205ENST00000547853 BDP1A6H8Y1 2624 aa11.72□□□□□ -0.53
CDK4-205ENST00000547853 CYP2E1P05181 493 aaPredicted RBP11.72□□□□□ -0.53
CDK4-205ENST00000547853 GSPT1P15170 499 aaKnown RBP11.72□□□□□ -0.53
CDK4-205ENST00000547853 NASPP49321 788 aaPredicted RBP11.72□□□□□ -0.53
CDK4-205ENST00000547853 NOL9Q5SY16 702 aaKnown RBP11.72□□□□□ -0.53
CDK4-205ENST00000547853 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
CDK4-205ENST00000547853 DCAF15Q66K64 600 aa11.72□□□□□ -0.53
CDK4-205ENST00000547853 G2E3Q7L622 706 aa11.72□□□□□ -0.53
CDK4-205ENST00000547853 ANKLE1Q8NAG6 615 aa11.72□□□□□ -0.53
CDK4-205ENST00000547853 NAP1L5Q96NT1 182 aaPredicted RBP11.72□□□□□ -0.53
CDK4-205ENST00000547853 ZNF341Q9BYN7 854 aa11.72□□□□□ -0.53
CDK4-205ENST00000547853 PANK2Q9BZ23 570 aa11.72□□□□□ -0.53
CDK4-205ENST00000547853 DDX49Q9Y6V7 483 aaKnown RBP11.72□□□□□ -0.53
CDK4-205ENST00000547853 ATRNL1Q5VV63 1379 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 ERC2O15083 957 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 MBD3O95983 291 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 MCCP23508 829 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 GYG1P46976 350 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 ANAPC15P60006 121 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 FOXO4P98177 505 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 HDLBPQ00341 1268 aaKnown RBP11.71□□□□□ -0.53
CDK4-205ENST00000547853 CEP85Q6P2H3 762 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 HOOK2Q96ED9 719 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 ZDHHC15Q96MV8 337 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 ZNF112Q9UJU3 913 aa11.71□□□□□ -0.53
CDK4-205ENST00000547853 PFASO15067 1338 aa11.7□□□□□ -0.54
CDK4-205ENST00000547853 TNPO2O14787 897 aaKnown RBP11.7□□□□□ -0.54
CDK4-205ENST00000547853 MCM5P33992 734 aa11.7□□□□□ -0.54
CDK4-205ENST00000547853 IFIT5Q13325 482 aaKnown RBP11.7□□□□□ -0.54
CDK4-205ENST00000547853 FAM109BQ6ICB4 259 aaPredicted RBP11.7□□□□□ -0.54
CDK4-205ENST00000547853 APOBEC3HQ6NTF7 200 aaKnown RBP11.7□□□□□ -0.54
CDK4-205ENST00000547853 MIGA2Q7L4E1 593 aa11.7□□□□□ -0.54
CDK4-205ENST00000547853 ZSCAN30Q86W11 494 aa11.7□□□□□ -0.54
CDK4-205ENST00000547853 TEKT1Q969V4 418 aa11.7□□□□□ -0.54
CDK4-205ENST00000547853 IL17RAQ96F46 866 aa11.7□□□□□ -0.54
CDK4-205ENST00000547853 CHMP4AQ9BY43 222 aa11.7□□□□□ -0.54
CDK4-205ENST00000547853 UBE2OQ9C0C9 1292 aaKnown RBP11.7□□□□□ -0.54
CDK4-205ENST00000547853 MYH2Q9UKX2 1941 aa11.69□□□□□ -0.54
CDK4-205ENST00000547853 POTEB2H3BUK9 544 aa11.69□□□□□ -0.54
CDK4-205ENST00000547853 HIBADHP31937 336 aaKnown RBP11.69□□□□□ -0.54
CDK4-205ENST00000547853 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.69□□□□□ -0.54
CDK4-205ENST00000547853 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
CDK4-205ENST00000547853 FAM84BQ96KN1 310 aaPredicted RBP11.69□□□□□ -0.54
CDK4-205ENST00000547853 SRCIN1Q9C0H9 1055 aa11.69□□□□□ -0.54
CDK4-205ENST00000547853 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
CDK4-205ENST00000547853 TMOD2Q9NZR1 351 aa11.69□□□□□ -0.54
CDK4-205ENST00000547853 A0A0G2JLL6 359 aaPredicted RBP11.68□□□□□ -0.54
CDK4-205ENST00000547853 UBE4AQ14139 1066 aa11.68□□□□□ -0.54
CDK4-205ENST00000547853 EPHA10Q5JZY3 1008 aa11.68□□□□□ -0.54
CDK4-205ENST00000547853 PRRT2Q7Z6L0 340 aaPredicted RBP11.68□□□□□ -0.54
CDK4-205ENST00000547853 LINS1Q8NG48 757 aa11.68□□□□□ -0.54
CDK4-205ENST00000547853 INTS4Q96HW7 963 aaKnown RBP11.68□□□□□ -0.54
CDK4-205ENST00000547853 NBPF3Q9H094 633 aa11.68□□□□□ -0.54
CDK4-205ENST00000547853 C11orf49Q9H6J7 331 aa11.68□□□□□ -0.54
CDK4-205ENST00000547853 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
CDK4-205ENST00000547853 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
CDK4-205ENST00000547853 HMGCRP04035 888 aa11.67□□□□□ -0.54
CDK4-205ENST00000547853 GNAI3P08754 354 aa11.67□□□□□ -0.54
CDK4-205ENST00000547853 SDSP20132 328 aa11.67□□□□□ -0.54
CDK4-205ENST00000547853 MSNP26038 577 aaKnown RBP11.67□□□□□ -0.54
CDK4-205ENST00000547853 FLIIQ13045 1269 aa11.67□□□□□ -0.54
CDK4-205ENST00000547853 DNAAF4Q8WXU2 420 aa11.67□□□□□ -0.54
CDK4-205ENST00000547853 SYAP1Q96A49 352 aaPredicted RBP11.67□□□□□ -0.54
CDK4-205ENST00000547853 STK31Q9BXU1 1019 aa11.67□□□□□ -0.54
CDK4-205ENST00000547853 TAOK2Q9UL54 1235 aa11.67□□□□□ -0.54
CDK4-205ENST00000547853 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms