RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PRDM10Q9NQV6 1147 aa22.62■■□□□ 1.21
PRPF40B-206ENST00000547764 MYH7P12883 1935 aa22.61■■□□□ 1.21
PRPF40B-206ENST00000547764 MBD4O95243 580 aa22.61■■□□□ 1.21
PRPF40B-206ENST00000547764 PPATQ06203 517 aa22.61■■□□□ 1.21
PRPF40B-206ENST00000547764 COL13A1Q5TAT6 717 aaPredicted RBP22.61■■□□□ 1.21
PRPF40B-206ENST00000547764 SCYL3Q8IZE3 742 aa22.61■■□□□ 1.21
PRPF40B-206ENST00000547764 HERC5Q9UII4 1024 aaKnown RBP22.61■■□□□ 1.21
PRPF40B-206ENST00000547764 TESPA1A2RU30 521 aaPredicted RBP22.6■■□□□ 1.21
PRPF40B-206ENST00000547764 IRF6O14896 467 aa22.6■■□□□ 1.21
PRPF40B-206ENST00000547764 CTNND1O60716 968 aaKnown RBP22.6■■□□□ 1.21
PRPF40B-206ENST00000547764 GTF2A2P52657 109 aa22.6■■□□□ 1.21
PRPF40B-206ENST00000547764 PPIL2Q13356 520 aa22.6■■□□□ 1.21
PRPF40B-206ENST00000547764 SLC4A8Q2Y0W8 1093 aa22.6■■□□□ 1.21
PRPF40B-206ENST00000547764 IFNL1Q8IU54 200 aa22.6■■□□□ 1.21
PRPF40B-206ENST00000547764 FOXP4Q8IVH2 680 aaPredicted RBP22.6■■□□□ 1.21
PRPF40B-206ENST00000547764 PUS7LQ9H0K6 701 aaKnown RBP22.6■■□□□ 1.21
PRPF40B-206ENST00000547764 LAMB1P07942 1786 aa22.59■■□□□ 1.21
PRPF40B-206ENST00000547764 IGF2BP3O00425 579 aaKnown RBP eCLIP22.59■■□□□ 1.21
PRPF40B-206ENST00000547764 RNF113AO15541 343 aaKnown RBP22.59■■□□□ 1.21
PRPF40B-206ENST00000547764 HLA-DOAP06340 250 aa22.59■■□□□ 1.21
PRPF40B-206ENST00000547764 METTL16Q86W50 562 aaKnown RBP22.59■■□□□ 1.21
PRPF40B-206ENST00000547764 SDR42E1Q8WUS8 393 aa22.59■■□□□ 1.21
PRPF40B-206ENST00000547764 PTPN18Q99952 460 aa22.59■■□□□ 1.21
PRPF40B-206ENST00000547764 PICK1Q9NRD5 415 aa22.59■■□□□ 1.21
PRPF40B-206ENST00000547764 SIPA1L1O43166 1804 aa22.59■■□□□ 1.21
PRPF40B-206ENST00000547764 PRKAB2O43741 272 aa22.58■■□□□ 1.21
PRPF40B-206ENST00000547764 ZFYP08048 801 aaPredicted RBP22.58■■□□□ 1.21
PRPF40B-206ENST00000547764 BRI3BPQ8WY22 251 aa22.58■■□□□ 1.21
PRPF40B-206ENST00000547764 DNAJC18Q9H819 358 aa22.58■■□□□ 1.21
PRPF40B-206ENST00000547764 MYH1P12882 1939 aa22.58■■□□□ 1.21
PRPF40B-206ENST00000547764 CCL15-CCL14A0A0B4J2E2 113 aa22.57■■□□□ 1.2
PRPF40B-206ENST00000547764 TBC1D8O95759 1140 aa22.57■■□□□ 1.2
PRPF40B-206ENST00000547764 PTPRAP18433 802 aa22.57■■□□□ 1.2
PRPF40B-206ENST00000547764 SNAPC2Q13487 334 aa22.57■■□□□ 1.2
PRPF40B-206ENST00000547764 RRP1BQ14684 758 aaKnown RBP22.57■■□□□ 1.2
PRPF40B-206ENST00000547764 CCL15Q16663 113 aa22.57■■□□□ 1.2
PRPF40B-206ENST00000547764 CRACR2BQ8N4Y2 399 aaPredicted RBP22.57■■□□□ 1.2
PRPF40B-206ENST00000547764 DCP1AQ9NPI6 582 aaPredicted RBP22.57■■□□□ 1.2
PRPF40B-206ENST00000547764 ALDH1A1P00352 501 aa22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 LRRFIP1Q32MZ4 808 aaKnown RBP22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 TTC6Q86TZ1 520 aa22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 APPBP2Q92624 585 aa22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 OSBP2Q969R2 916 aa22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 FSD1Q9BTV5 496 aa22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 TRIM34Q9BYJ4 488 aa22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 MCM9Q9NXL9 1143 aa22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 KCNH4Q9UQ05 1017 aa22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 ZHX2Q9Y6X8 837 aa22.56■■□□□ 1.2
PRPF40B-206ENST00000547764 POLR3DP05423 398 aaPredicted RBP22.55■■□□□ 1.2
PRPF40B-206ENST00000547764 CETPP11597 493 aa22.55■■□□□ 1.2
PRPF40B-206ENST00000547764 CAP2P40123 477 aa22.55■■□□□ 1.2
PRPF40B-206ENST00000547764 OTUD7BQ6GQQ9 843 aa22.55■■□□□ 1.2
PRPF40B-206ENST00000547764 PLEKHM2Q8IWE5 1019 aa22.55■■□□□ 1.2
PRPF40B-206ENST00000547764 EHD4Q9H223 541 aa22.55■■□□□ 1.2
PRPF40B-206ENST00000547764 ATP8A2Q9NTI2 1148 aa22.55■■□□□ 1.2
PRPF40B-206ENST00000547764 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.55■■□□□ 1.2
PRPF40B-206ENST00000547764 DOCK1Q14185 1865 aa22.54■■□□□ 1.2
PRPF40B-206ENST00000547764 PLCD1P51178 756 aa22.54■■□□□ 1.2
PRPF40B-206ENST00000547764 EVI5LQ96CN4 794 aa22.54■■□□□ 1.2
PRPF40B-206ENST00000547764 STRBPQ96SI9 672 aaKnown RBP22.54■■□□□ 1.2
PRPF40B-206ENST00000547764 CFHR5Q9BXR6 569 aa22.54■■□□□ 1.2
PRPF40B-206ENST00000547764 R3HDMLQ9H3Y0 253 aa22.54■■□□□ 1.2
PRPF40B-206ENST00000547764 SERPINB13Q9UIV8 391 aa22.54■■□□□ 1.2
PRPF40B-206ENST00000547764 SLC4A4Q9Y6R1 1079 aa22.54■■□□□ 1.2
PRPF40B-206ENST00000547764 CCDC84Q86UT8 332 aaPredicted RBP22.53■■□□□ 1.2
PRPF40B-206ENST00000547764 OSBPL3Q9H4L5 887 aa22.53■■□□□ 1.2
PRPF40B-206ENST00000547764 AFG3L2Q9Y4W6 797 aa22.53■■□□□ 1.2
PRPF40B-206ENST00000547764 DDX60LQ5H9U9 1706 aaKnown RBP22.53■■□□□ 1.2
PRPF40B-206ENST00000547764 NAV1Q8NEY1 1877 aa22.53■■□□□ 1.2
PRPF40B-206ENST00000547764 CXCL11O14625 94 aa22.52■■□□□ 1.2
PRPF40B-206ENST00000547764 EVX2Q03828 476 aa22.52■■□□□ 1.2
PRPF40B-206ENST00000547764 FAM43AQ8N2R8 423 aa22.52■■□□□ 1.2
PRPF40B-206ENST00000547764 CASP8AP2Q9UKL3 1982 aa22.52■■□□□ 1.2
PRPF40B-206ENST00000547764 BTBD19C9JJ37 291 aa22.51■■□□□ 1.19
PRPF40B-206ENST00000547764 M0R2C6 588 aa22.51■■□□□ 1.19
PRPF40B-206ENST00000547764 CYP2D6P10635 497 aa22.51■■□□□ 1.19
PRPF40B-206ENST00000547764 JAG1P78504 1218 aa22.51■■□□□ 1.19
PRPF40B-206ENST00000547764 TATDN1Q6P1N9 297 aa22.51■■□□□ 1.19
PRPF40B-206ENST00000547764 GPAA1O43292 621 aa22.5■■□□□ 1.19
PRPF40B-206ENST00000547764 GDF11O95390 407 aa22.5■■□□□ 1.19
PRPF40B-206ENST00000547764 MOGSQ13724 837 aa22.5■■□□□ 1.19
PRPF40B-206ENST00000547764 SHROOM1Q2M3G4 852 aaPredicted RBP22.5■■□□□ 1.19
PRPF40B-206ENST00000547764 ZMYM1Q5SVZ6 1142 aa22.5■■□□□ 1.19
PRPF40B-206ENST00000547764 SEC62Q99442 399 aaKnown RBP22.5■■□□□ 1.19
PRPF40B-206ENST00000547764 TRIM75PA6NK02 468 aa22.49■■□□□ 1.19
PRPF40B-206ENST00000547764 USP17L5A8MUK1 530 aa22.49■■□□□ 1.19
PRPF40B-206ENST00000547764 GPR25O00155 361 aa22.49■■□□□ 1.19
PRPF40B-206ENST00000547764 ASNSP08243 561 aa22.49■■□□□ 1.19
PRPF40B-206ENST00000547764 GABPAQ06546 454 aa22.49■■□□□ 1.19
PRPF40B-206ENST00000547764 CRHR2Q13324 411 aa22.49■■□□□ 1.19
PRPF40B-206ENST00000547764 DDRGK1Q96HY6 314 aa22.49■■□□□ 1.19
PRPF40B-206ENST00000547764 PHIPQ8WWQ0 1821 aa22.49■■□□□ 1.19
PRPF40B-206ENST00000547764 ATAD5Q96QE3 1844 aa22.49■■□□□ 1.19
PRPF40B-206ENST00000547764 A0A0G2JLL6 359 aaPredicted RBP22.48■■□□□ 1.19
PRPF40B-206ENST00000547764 GSG1L2A8MUP6 293 aa22.48■■□□□ 1.19
PRPF40B-206ENST00000547764 TRIM6-TRIM34B2RNG4 842 aa22.48■■□□□ 1.19
PRPF40B-206ENST00000547764 USP17L12C9JPN9 530 aa22.48■■□□□ 1.19
PRPF40B-206ENST00000547764 USP17L21D6R901 530 aa22.48■■□□□ 1.19
PRPF40B-206ENST00000547764 PDE4AP27815 886 aa22.48■■□□□ 1.19
PRPF40B-206ENST00000547764 SHMT1P34896 483 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms