RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 SAGE1Q9NXZ1 904 aa12.4□□□□□ -0.42
LINC02409-201ENST00000547515 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.42
LINC02409-201ENST00000547515 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
LINC02409-201ENST00000547515 CHGBP05060 677 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 SLURP2P0DP57 97 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 USP5P45974 858 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 INHBEP58166 350 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 PPATQ06203 517 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 PPIL2Q13356 520 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 SLFNL1Q499Z3 407 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 B4GALNT3Q6L9W6 998 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 METTL16Q86W50 562 aaKnown RBP12.39□□□□□ -0.43
LINC02409-201ENST00000547515 LCORLQ8N3X6 602 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 CRNKL1Q9BZJ0 848 aaKnown RBP12.39□□□□□ -0.43
LINC02409-201ENST00000547515 RNF186Q9NXI6 227 aa12.39□□□□□ -0.43
LINC02409-201ENST00000547515 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
LINC02409-201ENST00000547515 HERC5Q9UII4 1024 aaKnown RBP12.39□□□□□ -0.43
LINC02409-201ENST00000547515 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
LINC02409-201ENST00000547515 MBD4O95243 580 aa12.38□□□□□ -0.43
LINC02409-201ENST00000547515 ZFYP08048 801 aaPredicted RBP12.38□□□□□ -0.43
LINC02409-201ENST00000547515 FOXP4Q8IVH2 680 aaPredicted RBP12.38□□□□□ -0.43
LINC02409-201ENST00000547515 SCYL3Q8IZE3 742 aa12.38□□□□□ -0.43
LINC02409-201ENST00000547515 OTUD5Q96G74 571 aa12.38□□□□□ -0.43
LINC02409-201ENST00000547515 MS4A4AQ96JQ5 239 aa12.38□□□□□ -0.43
LINC02409-201ENST00000547515 ARMT1Q9H993 441 aa12.38□□□□□ -0.43
LINC02409-201ENST00000547515 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC02409-201ENST00000547515 PRDM10Q9NQV6 1147 aa12.38□□□□□ -0.43
LINC02409-201ENST00000547515 SAP30BPQ9UHR5 308 aaKnown RBP12.38□□□□□ -0.43
LINC02409-201ENST00000547515 PALD1Q9ULE6 856 aa12.38□□□□□ -0.43
LINC02409-201ENST00000547515 FAM196BA6NMK8 535 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 RNF113AO15541 343 aaKnown RBP12.37□□□□□ -0.43
LINC02409-201ENST00000547515 TRPA1O75762 1119 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 HLA-DOAP06340 250 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 GTF2A2P52657 109 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 LBX1P52954 281 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 LRRFIP1Q32MZ4 808 aaKnown RBP12.37□□□□□ -0.43
LINC02409-201ENST00000547515 PLEKHM2Q8IWE5 1019 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 APPBP2Q92624 585 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 PUS7LQ9H0K6 701 aaKnown RBP12.37□□□□□ -0.43
LINC02409-201ENST00000547515 OSBPL3Q9H4L5 887 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 LOC285556D6RIA3 1793 aa12.37□□□□□ -0.43
LINC02409-201ENST00000547515 IGF2BP3O00425 579 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC02409-201ENST00000547515 IRF6O14896 467 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 ALDH1A1P00352 501 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 RRP1BQ14684 758 aaKnown RBP12.36□□□□□ -0.43
LINC02409-201ENST00000547515 TTC6Q86TZ1 520 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 IFNL1Q8IU54 200 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 SDR42E1Q8WUS8 393 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 OSBP2Q969R2 916 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 CFHR5Q9BXR6 569 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 EHD4Q9H223 541 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 DCP1AQ9NPI6 582 aaPredicted RBP12.36□□□□□ -0.43
LINC02409-201ENST00000547515 PICK1Q9NRD5 415 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 TSKSQ9UJT2 592 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 KCNH4Q9UQ05 1017 aa12.36□□□□□ -0.43
LINC02409-201ENST00000547515 PRKAB2O43741 272 aa12.35□□□□□ -0.43
LINC02409-201ENST00000547515 CETPP11597 493 aa12.35□□□□□ -0.43
LINC02409-201ENST00000547515 PTPRAP18433 802 aa12.35□□□□□ -0.43
LINC02409-201ENST00000547515 CAP2P40123 477 aa12.35□□□□□ -0.43
LINC02409-201ENST00000547515 SNAPC2Q13487 334 aa12.35□□□□□ -0.43
LINC02409-201ENST00000547515 TICAM2Q86XR7 235 aa12.35□□□□□ -0.43
LINC02409-201ENST00000547515 CRACR2BQ8N4Y2 399 aaPredicted RBP12.35□□□□□ -0.43
LINC02409-201ENST00000547515 STRBPQ96SI9 672 aaKnown RBP12.35□□□□□ -0.43
LINC02409-201ENST00000547515 PTPN18Q99952 460 aa12.35□□□□□ -0.43
LINC02409-201ENST00000547515 FSD1Q9BTV5 496 aa12.35□□□□□ -0.43
LINC02409-201ENST00000547515 SERPINB13Q9UIV8 391 aa12.35□□□□□ -0.43
LINC02409-201ENST00000547515 CCL15-CCL14A0A0B4J2E2 113 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 CXCL11O14625 94 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 PLCD1P51178 756 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 CCL15Q16663 113 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 NOM1Q5C9Z4 860 aaKnown RBP12.34□□□□□ -0.43
LINC02409-201ENST00000547515 ZMYM1Q5SVZ6 1142 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 OTUD7BQ6GQQ9 843 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 TATDN1Q6P1N9 297 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 GINM1Q9NU53 330 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 MCM9Q9NXL9 1143 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 AFG3L2Q9Y4W6 797 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 MGAMO43451 1857 aa12.34□□□□□ -0.43
LINC02409-201ENST00000547515 DOCK3Q8IZD9 2030 aa12.33□□□□□ -0.43
LINC02409-201ENST00000547515 GREB1LQ9C091 1923 aaPredicted RBP12.33□□□□□ -0.44
LINC02409-201ENST00000547515 M0R2C6 588 aa12.33□□□□□ -0.44
LINC02409-201ENST00000547515 GPAA1O43292 621 aa12.33□□□□□ -0.44
LINC02409-201ENST00000547515 POLR3DP05423 398 aaPredicted RBP12.33□□□□□ -0.44
LINC02409-201ENST00000547515 PDE4AP27815 886 aa12.33□□□□□ -0.44
LINC02409-201ENST00000547515 GABPAQ06546 454 aa12.33□□□□□ -0.44
LINC02409-201ENST00000547515 COL13A1Q5TAT6 717 aaPredicted RBP12.33□□□□□ -0.44
LINC02409-201ENST00000547515 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
LINC02409-201ENST00000547515 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
LINC02409-201ENST00000547515 SLC4A4Q9Y6R1 1079 aa12.33□□□□□ -0.44
LINC02409-201ENST00000547515 ZHX2Q9Y6X8 837 aa12.33□□□□□ -0.44
LINC02409-201ENST00000547515 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
LINC02409-201ENST00000547515 TBC1D8O95759 1140 aa12.32□□□□□ -0.44
LINC02409-201ENST00000547515 ASNSP08243 561 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms