RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 SERPINC1P01008 464 aa16.78■□□□□ 0.28
LETMD1-209ENST00000547318 E4F1Q66K89 784 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-209ENST00000547318 ERCC4Q92889 916 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-209ENST00000547318 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
LETMD1-209ENST00000547318 AIFM3Q96NN9 605 aa16.78■□□□□ 0.28
LETMD1-209ENST00000547318 SRRTQ9BXP5 876 aaKnown RBP16.78■□□□□ 0.28
LETMD1-209ENST00000547318 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
LETMD1-209ENST00000547318 SLC4A4Q9Y6R1 1079 aa16.78■□□□□ 0.28
LETMD1-209ENST00000547318 SLIT2O94813 1529 aa16.78■□□□□ 0.28
LETMD1-209ENST00000547318 USP27XA6NNY8 438 aa16.77■□□□□ 0.28
LETMD1-209ENST00000547318 IGSF3O75054 1194 aa16.77■□□□□ 0.28
LETMD1-209ENST00000547318 METTL16Q86W50 562 aaKnown RBP16.77■□□□□ 0.28
LETMD1-209ENST00000547318 VSTM4Q8IW00 320 aa16.77■□□□□ 0.28
LETMD1-209ENST00000547318 DIS3L2Q8IYB7 885 aaKnown RBP16.77■□□□□ 0.28
LETMD1-209ENST00000547318 CRACR2BQ8N4Y2 399 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-209ENST00000547318 ZNF592Q92610 1267 aa16.77■□□□□ 0.28
LETMD1-209ENST00000547318 ESR2Q92731 530 aa16.77■□□□□ 0.28
LETMD1-209ENST00000547318 ARMT1Q9H993 441 aa16.77■□□□□ 0.28
LETMD1-209ENST00000547318 SRPRBQ9Y5M8 271 aaKnown RBP16.77■□□□□ 0.28
LETMD1-209ENST00000547318 AHDC1Q5TGY3 1603 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-209ENST00000547318 BCL9LQ86UU0 1499 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 ZSCAN12O43309 604 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 CALM1P0DP23 149 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 CALM2P0DP24 149 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 CALM3P0DP25 149 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 SUSD4Q5VX71 490 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 ENOX1Q8TC92 643 aaKnown RBP16.77■□□□□ 0.27
LETMD1-209ENST00000547318 UBAC1Q9BSL1 405 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 HSD3B7Q9H2F3 369 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 TMX1Q9H3N1 280 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 RBM28Q9NW13 759 aaKnown RBP16.77■□□□□ 0.27
LETMD1-209ENST00000547318 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.27
LETMD1-209ENST00000547318 COL16A1Q07092 1604 aaPredicted RBP16.77■□□□□ 0.27
LETMD1-209ENST00000547318 ZNF804BA4D1E1 1349 aa16.76■□□□□ 0.27
LETMD1-209ENST00000547318 DLEC1Q9Y238 1755 aa16.76■□□□□ 0.27
LETMD1-209ENST00000547318 A0A087WWV3 80 aa16.76■□□□□ 0.27
LETMD1-209ENST00000547318 ZBTB22O15209 634 aa16.76■□□□□ 0.27
LETMD1-209ENST00000547318 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
LETMD1-209ENST00000547318 MDM2Q00987 491 aaPredicted RBP16.76■□□□□ 0.27
LETMD1-209ENST00000547318 FBXO2Q9UK22 296 aaPredicted RBP16.76■□□□□ 0.27
LETMD1-209ENST00000547318 DENND2AQ9ULE3 1009 aa16.76■□□□□ 0.27
LETMD1-209ENST00000547318 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
LETMD1-209ENST00000547318 CTDSPL2Q05D32 466 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 PNOCQ13519 176 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 POSTNQ15063 836 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 LONRF3Q496Y0 759 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 ZNF654Q8IZM8 581 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 FANCBQ8NB91 859 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 FBXW7Q969H0 707 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 PYM1Q9BRP8 204 aaKnown RBP16.75■□□□□ 0.27
LETMD1-209ENST00000547318 SENP2Q9HC62 589 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 PCDHA5Q9Y5H7 936 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 ZNF335Q9H4Z2 1342 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-209ENST00000547318 A0A1B0GUL6 1792 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 ARHGAP6O43182 974 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 RXRAP19793 462 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 ERCC5P28715 1186 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-209ENST00000547318 SARSP49591 514 aaKnown RBP16.75■□□□□ 0.27
LETMD1-209ENST00000547318 AKAP17AQ02040 695 aaKnown RBP16.75■□□□□ 0.27
LETMD1-209ENST00000547318 PPARAQ07869 468 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 CFAP100Q494V2 611 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 INTS5Q6P9B9 1019 aaKnown RBP16.75■□□□□ 0.27
LETMD1-209ENST00000547318 STK11IPQ8N1F8 1099 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 LCORLQ8N3X6 602 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 SMARCE1Q969G3 411 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 LRP2BPQ9P2M1 347 aa16.75■□□□□ 0.27
LETMD1-209ENST00000547318 PDS5AQ29RF7 1337 aaKnown RBP16.75■□□□□ 0.27
LETMD1-209ENST00000547318 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-209ENST00000547318 SEMA3EO15041 775 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 ETF1P62495 437 aaKnown RBP16.74■□□□□ 0.27
LETMD1-209ENST00000547318 DMTNQ08495 405 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 UBE4AQ14139 1066 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 BRIP1Q9BX63 1249 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 TRMT1Q9NXH9 659 aaKnown RBP16.74■□□□□ 0.27
LETMD1-209ENST00000547318 DUOX1Q9NRD9 1551 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 BTBD18B2RXH4 712 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 NTSR2O95665 410 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 CLEC4GQ6UXB4 293 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-209ENST00000547318 SPATA20Q8TB22 786 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 FERMT2Q96AC1 680 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 BRMS1Q9HCU9 246 aa16.74■□□□□ 0.27
LETMD1-209ENST00000547318 AATFQ9NY61 560 aaKnown RBP eCLIP16.74■□□□□ 0.27
LETMD1-209ENST00000547318 DDX41Q9UJV9 622 aaKnown RBP16.74■□□□□ 0.27
LETMD1-209ENST00000547318 FAM177BA6PVY3 158 aa16.73■□□□□ 0.27
LETMD1-209ENST00000547318 TOB1P50616 345 aaPredicted RBP16.73■□□□□ 0.27
LETMD1-209ENST00000547318 FAM193AP78312 1265 aa16.73■□□□□ 0.27
LETMD1-209ENST00000547318 MORC3Q14149 939 aa16.73■□□□□ 0.27
LETMD1-209ENST00000547318 SEC23AQ15436 765 aa16.73■□□□□ 0.27
LETMD1-209ENST00000547318 HELBQ8NG08 1087 aaPredicted RBP16.73■□□□□ 0.27
LETMD1-209ENST00000547318 CLIC6Q96NY7 704 aa16.73■□□□□ 0.27
LETMD1-209ENST00000547318 MYL10Q9BUA6 226 aa16.73■□□□□ 0.27
LETMD1-209ENST00000547318 ZNF215Q9UL58 517 aaPredicted RBP16.73■□□□□ 0.27
LETMD1-209ENST00000547318 MAGEB6P1A0A0J9YX57 407 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 STX10O60499 249 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 TPM1P09493 284 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 FGRP09769 529 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 CCDC93Q567U6 631 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 NKX2-3Q8TAU0 364 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms