RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 R3HDMLQ9H3Y0 253 aa17.92■□□□□ 0.46
CCDC38-205ENST00000546947 PICK1Q9NRD5 415 aa17.92■□□□□ 0.46
CCDC38-205ENST00000546947 KCNH4Q9UQ05 1017 aa17.92■□□□□ 0.46
CCDC38-205ENST00000546947 SLURP2P0DP57 97 aa17.91■□□□□ 0.46
CCDC38-205ENST00000546947 PTPRAP18433 802 aa17.91■□□□□ 0.46
CCDC38-205ENST00000546947 USP5P45974 858 aa17.91■□□□□ 0.46
CCDC38-205ENST00000546947 CTU1Q7Z7A3 348 aaKnown RBP17.91■□□□□ 0.46
CCDC38-205ENST00000546947 EDC3Q96F86 508 aaKnown RBP17.91■□□□□ 0.46
CCDC38-205ENST00000546947 ABHD8Q96I13 439 aa17.91■□□□□ 0.46
CCDC38-205ENST00000546947 GPATCH3Q96I76 525 aa17.91■□□□□ 0.46
CCDC38-205ENST00000546947 RIOK1Q9BRS2 568 aaKnown RBP17.91■□□□□ 0.46
CCDC38-205ENST00000546947 ECHDC1Q9NTX5 307 aa17.91■□□□□ 0.46
CCDC38-205ENST00000546947 PTPRFP10586 1907 aa17.91■□□□□ 0.46
CCDC38-205ENST00000546947 NAV1Q8NEY1 1877 aa17.9■□□□□ 0.46
CCDC38-205ENST00000546947 MAGEB6P1A0A0J9YX57 407 aa17.9■□□□□ 0.46
CCDC38-205ENST00000546947 TCRBV5S4A2TA0A5A2 114 aa17.9■□□□□ 0.46
CCDC38-205ENST00000546947 CXCL11O14625 94 aa17.9■□□□□ 0.46
CCDC38-205ENST00000546947 HLA-DOAP06340 250 aa17.9■□□□□ 0.46
CCDC38-205ENST00000546947 CRHR2Q13324 411 aa17.9■□□□□ 0.46
CCDC38-205ENST00000546947 TAF1CQ15572 869 aaPredicted RBP17.9■□□□□ 0.46
CCDC38-205ENST00000546947 METTL16Q86W50 562 aaKnown RBP17.9■□□□□ 0.46
CCDC38-205ENST00000546947 FOXP4Q8IVH2 680 aaPredicted RBP17.9■□□□□ 0.46
CCDC38-205ENST00000546947 FAM43AQ8N2R8 423 aa17.9■□□□□ 0.46
CCDC38-205ENST00000546947 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCDC38-205ENST00000546947 ZFYVE28Q9HCC9 887 aa17.9■□□□□ 0.46
CCDC38-205ENST00000546947 ZNF532Q9HCE3 1301 aa17.9■□□□□ 0.46
CCDC38-205ENST00000546947 FAM196BA6NMK8 535 aa17.89■□□□□ 0.45
CCDC38-205ENST00000546947 BTBD19C9JJ37 291 aa17.89■□□□□ 0.45
CCDC38-205ENST00000546947 TBC1D2Q9BYX2 928 aa17.89■□□□□ 0.45
CCDC38-205ENST00000546947 ZHX2Q9Y6X8 837 aa17.89■□□□□ 0.45
CCDC38-205ENST00000546947 DDX60LQ5H9U9 1706 aaKnown RBP17.89■□□□□ 0.45
CCDC38-205ENST00000546947 CAPN15O75808 1086 aa17.88■□□□□ 0.45
CCDC38-205ENST00000546947 ADD2P35612 726 aa17.88■□□□□ 0.45
CCDC38-205ENST00000546947 HDAC1Q13547 482 aaPredicted RBP17.88■□□□□ 0.45
CCDC38-205ENST00000546947 PKN2Q16513 984 aaKnown RBP17.88■□□□□ 0.45
CCDC38-205ENST00000546947 ANKRD23Q86SG2 305 aa17.88■□□□□ 0.45
CCDC38-205ENST00000546947 PALD1Q9ULE6 856 aa17.88■□□□□ 0.45
CCDC38-205ENST00000546947 AFG3L2Q9Y4W6 797 aa17.88■□□□□ 0.45
CCDC38-205ENST00000546947 CAP2P40123 477 aa17.87■□□□□ 0.45
CCDC38-205ENST00000546947 ZSCAN25Q6NSZ9 544 aa17.87■□□□□ 0.45
CCDC38-205ENST00000546947 CRACR2BQ8N4Y2 399 aaPredicted RBP17.87■□□□□ 0.45
CCDC38-205ENST00000546947 GCC1Q96CN9 775 aa17.87■□□□□ 0.45
CCDC38-205ENST00000546947 TRIM34Q9BYJ4 488 aa17.87■□□□□ 0.45
CCDC38-205ENST00000546947 CRNKL1Q9BZJ0 848 aaKnown RBP17.87■□□□□ 0.45
CCDC38-205ENST00000546947 SAP30BPQ9UHR5 308 aaKnown RBP17.87■□□□□ 0.45
CCDC38-205ENST00000546947 TTC41PQ6P2S7 1318 aa17.87■□□□□ 0.45
CCDC38-205ENST00000546947 A0A0G2JLL6 359 aaPredicted RBP17.86■□□□□ 0.45
CCDC38-205ENST00000546947 SP3Q02447 781 aa17.86■□□□□ 0.45
CCDC38-205ENST00000546947 MOGSQ13724 837 aa17.86■□□□□ 0.45
CCDC38-205ENST00000546947 UBE3CQ15386 1083 aa17.86■□□□□ 0.45
CCDC38-205ENST00000546947 FASTKD5Q7L8L6 764 aaKnown RBP17.86■□□□□ 0.45
CCDC38-205ENST00000546947 PRRT2Q7Z6L0 340 aaPredicted RBP17.86■□□□□ 0.45
CCDC38-205ENST00000546947 ERO1AQ96HE7 468 aa17.86■□□□□ 0.45
CCDC38-205ENST00000546947 DNAJC18Q9H819 358 aa17.86■□□□□ 0.45
CCDC38-205ENST00000546947 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
CCDC38-205ENST00000546947 TLR2O60603 784 aa17.85■□□□□ 0.45
CCDC38-205ENST00000546947 TTC6Q86TZ1 520 aa17.85■□□□□ 0.45
CCDC38-205ENST00000546947 EHD4Q9H223 541 aa17.85■□□□□ 0.45
CCDC38-205ENST00000546947 GINM1Q9NU53 330 aa17.85■□□□□ 0.45
CCDC38-205ENST00000546947 USP17L5A8MUK1 530 aa17.84■□□□□ 0.45
CCDC38-205ENST00000546947 PDHXO00330 501 aa17.84■□□□□ 0.45
CCDC38-205ENST00000546947 ERC2O15083 957 aa17.84■□□□□ 0.45
CCDC38-205ENST00000546947 ASNSP08243 561 aa17.84■□□□□ 0.45
CCDC38-205ENST00000546947 RRP1BQ14684 758 aaKnown RBP17.84■□□□□ 0.45
CCDC38-205ENST00000546947 LCORLQ8N3X6 602 aa17.84■□□□□ 0.45
CCDC38-205ENST00000546947 AS3MTQ9HBK9 375 aa17.84■□□□□ 0.45
CCDC38-205ENST00000546947 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.84■□□□□ 0.45
CCDC38-205ENST00000546947 SERPINB13Q9UIV8 391 aa17.84■□□□□ 0.45
CCDC38-205ENST00000546947 LOC285556D6RIA3 1793 aa17.84■□□□□ 0.45
CCDC38-205ENST00000546947 SLC4A8Q2Y0W8 1093 aa17.83■□□□□ 0.44
CCDC38-205ENST00000546947 ANKRD45Q5TZF3 282 aa17.83■□□□□ 0.44
CCDC38-205ENST00000546947 GPAT2Q6NUI2 795 aa17.83■□□□□ 0.44
CCDC38-205ENST00000546947 KBTBD3Q8NAB2 608 aa17.83■□□□□ 0.44
CCDC38-205ENST00000546947 SLC45A1Q9Y2W3 748 aa17.83■□□□□ 0.44
CCDC38-205ENST00000546947 SUPT16HQ9Y5B9 1047 aaKnown RBP17.83■□□□□ 0.44
CCDC38-205ENST00000546947 BAZ2AQ9UIF9 1905 aaKnown RBP17.82■□□□□ 0.44
CCDC38-205ENST00000546947 TRIM75PA6NK02 468 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 GLRX3O76003 335 aaKnown RBP17.82■□□□□ 0.44
CCDC38-205ENST00000546947 POLR3DP05423 398 aaPredicted RBP17.82■□□□□ 0.44
CCDC38-205ENST00000546947 SLFNL1Q499Z3 407 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 TSHZ3Q63HK5 1081 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 TATDN1Q6P1N9 297 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 FBXO46Q6PJ61 603 aaPredicted RBP17.82■□□□□ 0.44
CCDC38-205ENST00000546947 GADL1Q6ZQY3 521 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 CCDC84Q86UT8 332 aaPredicted RBP17.82■□□□□ 0.44
CCDC38-205ENST00000546947 ZNF280CQ8ND82 737 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 EXOC6Q8TAG9 804 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 CD99L2Q8TCZ2 262 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 RWDD1Q9H446 243 aaPredicted RBP17.82■□□□□ 0.44
CCDC38-205ENST00000546947 ARMT1Q9H993 441 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 ATP8A2Q9NTI2 1148 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 TRIM17Q9Y577 477 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 MYH8P13535 1937 aa17.82■□□□□ 0.44
CCDC38-205ENST00000546947 SALL3Q9BXA9 1300 aa17.81■□□□□ 0.44
CCDC38-205ENST00000546947 CCDC85CA6NKD9 419 aa17.81■□□□□ 0.44
CCDC38-205ENST00000546947 MBD4O95243 580 aa17.81■□□□□ 0.44
CCDC38-205ENST00000546947 MX1P20591 662 aa17.81■□□□□ 0.44
CCDC38-205ENST00000546947 SPP2Q13103 211 aa17.81■□□□□ 0.44
CCDC38-205ENST00000546947 ARHGEF6Q15052 776 aa17.81■□□□□ 0.44
CCDC38-205ENST00000546947 OTOP1Q7RTM1 612 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms