RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 KCNJ14Q9UNX9 436 aa13.39□□□□□ -0.27
CHERP-203ENST00000546361 CCT6AP40227 531 aaKnown RBP13.39□□□□□ -0.27
CHERP-203ENST00000546361 PNMA1Q8ND90 353 aa13.39□□□□□ -0.27
CHERP-203ENST00000546361 CTNNBL1Q8WYA6 563 aaPredicted RBP13.39□□□□□ -0.27
CHERP-203ENST00000546361 FERMT2Q96AC1 680 aa13.39□□□□□ -0.27
CHERP-203ENST00000546361 CCNT1O60563 726 aaKnown RBP13.38□□□□□ -0.27
CHERP-203ENST00000546361 CCDC172P0C7W6 258 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
CHERP-203ENST00000546361 PLCD1P51178 756 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 BRDTQ58F21 947 aaPredicted RBP13.38□□□□□ -0.27
CHERP-203ENST00000546361 GINS2Q9Y248 185 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 CAMSAP1Q5T5Y3 1602 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 CLRN2A0PK11 232 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 RAD17O75943 681 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 ADCY7P51828 1080 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 TYRO3Q06418 890 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 PI16Q6UXB8 463 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 SV2BQ7L1I2 683 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 LUZP1Q86V48 1076 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 BEGAINQ9BUH8 593 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 VPS54Q9P1Q0 977 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 TNKSO95271 1327 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 SEMA3EO15041 775 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 TTC38Q5R3I4 469 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 ATP8A2Q9NTI2 1148 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 STAP2Q9UGK3 403 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 TNS3Q68CZ2 1445 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 ALKQ9UM73 1620 aa13.38□□□□□ -0.27
CHERP-203ENST00000546361 CTNNA2P26232 953 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 KRT25Q7Z3Z0 450 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 REXO1Q8N1G1 1221 aaKnown RBP13.37□□□□□ -0.27
CHERP-203ENST00000546361 C16orf45Q96MC5 204 aaPredicted RBP13.37□□□□□ -0.27
CHERP-203ENST00000546361 UIMC1Q96RL1 719 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 ANTXR1Q9H6X2 564 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 NARFQ9UHQ1 456 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 TAF3Q5VWG9 929 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 GPHNQ9NQX3 736 aaPredicted RBP13.37□□□□□ -0.27
CHERP-203ENST00000546361 H7C1W4 665 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 NOP56O00567 594 aaKnown RBP13.37□□□□□ -0.27
CHERP-203ENST00000546361 PRPF4BQ13523 1007 aaKnown RBP13.37□□□□□ -0.27
CHERP-203ENST00000546361 MTERF4Q7Z6M4 381 aaKnown RBP13.37□□□□□ -0.27
CHERP-203ENST00000546361 CCDC65Q8IXS2 484 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 TBC1D5Q92609 795 aa13.37□□□□□ -0.27
CHERP-203ENST00000546361 DCPSQ96C86 337 aaKnown RBP13.37□□□□□ -0.27
CHERP-203ENST00000546361 CMTR1Q8N1G2 835 aaKnown RBP13.36□□□□□ -0.27
CHERP-203ENST00000546361 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 FANCBQ8NB91 859 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 NOD1Q9Y239 953 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 ICA1Q05084 483 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 TAX1BP1Q86VP1 789 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 TMX1Q9H3N1 280 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 LRWD1Q9UFC0 647 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 KLRF2D3W0D1 207 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 IGKV5-2P06315 115 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 FAM160A1Q05DH4 1040 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 CCDC93Q567U6 631 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 HAUS3Q68CZ6 603 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
CHERP-203ENST00000546361 ZSCAN10Q96SZ4 725 aaPredicted RBP13.36□□□□□ -0.27
CHERP-203ENST00000546361 GTPBP4Q9BZE4 634 aaKnown RBP13.36□□□□□ -0.27
CHERP-203ENST00000546361 KCNH3Q9ULD8 1083 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 JCADQ9P266 1359 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 LAMC1P11047 1609 aa13.36□□□□□ -0.27
CHERP-203ENST00000546361 BICDL2A1A5D9 508 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 FAM193AP78312 1265 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 ARID5AQ03989 594 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 PALD1Q9ULE6 856 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■■□ 19.6
CHERP-203ENST00000546361 ANKRD62A6NC57 917 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 NPR1P16066 1061 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 RBM10P98175 930 aaKnown RBP13.35□□□□□ -0.27
CHERP-203ENST00000546361 GRAPQ13588 217 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 ME3Q16798 604 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 GRAPLQ8TC17 118 aaPredicted RBP13.35□□□□□ -0.27
CHERP-203ENST00000546361 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 SYNCQ9H7C4 482 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 GSTTP1A0A1W2PQM5 241 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 SMCO2A6NFE2 343 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 TRAF5O00463 557 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 PTGS1P23219 599 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 CASQ1P31415 396 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 SPECC1Q5M775 1068 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 CCDC186Q7Z3E2 898 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 ALS2CR12Q96Q35 445 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 ELP1O95163 1332 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 DDX39AO00148 427 aaKnown RBP13.35□□□□□ -0.27
CHERP-203ENST00000546361 SNAP23O00161 211 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 POLR2DO15514 142 aaKnown RBP13.35□□□□□ -0.27
CHERP-203ENST00000546361 TXNRD1Q16881 649 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 ZMYM1Q5SVZ6 1142 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 SYNE4Q8N205 404 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 ZNF274Q96GC6 653 aaPredicted RBP13.35□□□□□ -0.27
CHERP-203ENST00000546361 CSRNP1Q96S65 589 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 AS3MTQ9HBK9 375 aa13.35□□□□□ -0.27
CHERP-203ENST00000546361 POLR1AO95602 1720 aaPredicted RBP13.34□□□□□ -0.27
CHERP-203ENST00000546361 SASH1O94885 1247 aa13.34□□□□□ -0.27
CHERP-203ENST00000546361 HARSP12081 509 aaKnown RBP13.34□□□□□ -0.27
CHERP-203ENST00000546361 RPL13P26373 211 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms