RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 SAGE1Q9NXZ1 904 aa18.88■□□□□ 0.61
SCRIB-208ENST00000546337 PALD1Q9ULE6 856 aa18.88■□□□□ 0.61
SCRIB-208ENST00000546337 SNCAIPQ9Y6H5 919 aa18.88■□□□□ 0.61
SCRIB-208ENST00000546337 TESPA1A2RU30 521 aaPredicted RBP18.87■□□□□ 0.61
SCRIB-208ENST00000546337 HIP1O00291 1037 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 ALDH1A1P00352 501 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 INPP5BP32019 993 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 PPIL2Q13356 520 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 AMOTL1Q8IY63 956 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 SCYL3Q8IZE3 742 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 ZKSCAN4Q969J2 545 aaPredicted RBP18.87■□□□□ 0.61
SCRIB-208ENST00000546337 TRIM34Q9BYJ4 488 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 THSD7BQ9C0I4 1608 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 ELP3Q9H9T3 547 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 HELLSQ9NRZ9 838 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 SERPINB13Q9UIV8 391 aa18.87■□□□□ 0.61
SCRIB-208ENST00000546337 CXCL11O14625 94 aa18.86■□□□□ 0.61
SCRIB-208ENST00000546337 GTF2A2P52657 109 aa18.86■□□□□ 0.61
SCRIB-208ENST00000546337 OTUD7BQ6GQQ9 843 aa18.86■□□□□ 0.61
SCRIB-208ENST00000546337 CRACR2BQ8N4Y2 399 aaPredicted RBP18.86■□□□□ 0.61
SCRIB-208ENST00000546337 OPTNQ96CV9 577 aa18.86■□□□□ 0.61
SCRIB-208ENST00000546337 PICK1Q9NRD5 415 aa18.86■□□□□ 0.61
SCRIB-208ENST00000546337 MCM9Q9NXL9 1143 aa18.86■□□□□ 0.61
SCRIB-208ENST00000546337 POLR3DP05423 398 aaPredicted RBP18.85■□□□□ 0.61
SCRIB-208ENST00000546337 HSPA1AP0DMV8 641 aaKnown RBP18.85■□□□□ 0.61
SCRIB-208ENST00000546337 HSPA1BP0DMV9 641 aaKnown RBP18.85■□□□□ 0.61
SCRIB-208ENST00000546337 CAP2P40123 477 aa18.85■□□□□ 0.61
SCRIB-208ENST00000546337 CFHR5Q9BXR6 569 aa18.85■□□□□ 0.61
SCRIB-208ENST00000546337 SLC4A4Q9Y6R1 1079 aa18.85■□□□□ 0.61
SCRIB-208ENST00000546337 AK9Q5TCS8 1911 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 TRIM6-TRIM34B2RNG4 842 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 PATL2C9JE40 543 aaKnown RBP18.84■□□□□ 0.61
SCRIB-208ENST00000546337 GPAA1O43292 621 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 CTCFP49711 727 aaPredicted RBP18.84■□□□□ 0.61
SCRIB-208ENST00000546337 SNAPC2Q13487 334 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 SBK1Q52WX2 424 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 TATDN1Q6P1N9 297 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 ZIC5Q96T25 663 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 NACAP1Q9BZK3 213 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 ZCCHC17Q9NP64 241 aaKnown RBP18.84■□□□□ 0.61
SCRIB-208ENST00000546337 SWAP70Q9UH65 585 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 SAP30BPQ9UHR5 308 aaKnown RBP18.84■□□□□ 0.61
SCRIB-208ENST00000546337 KCNH4Q9UQ05 1017 aa18.84■□□□□ 0.61
SCRIB-208ENST00000546337 ASNSP08243 561 aa18.83■□□□□ 0.6
SCRIB-208ENST00000546337 CETPP11597 493 aa18.83■□□□□ 0.6
SCRIB-208ENST00000546337 PDE4AP27815 886 aa18.83■□□□□ 0.6
SCRIB-208ENST00000546337 MFAP1P55081 439 aaKnown RBP18.83■□□□□ 0.6
SCRIB-208ENST00000546337 GABPAQ06546 454 aa18.83■□□□□ 0.6
SCRIB-208ENST00000546337 SDR42E1Q8WUS8 393 aa18.83■□□□□ 0.6
SCRIB-208ENST00000546337 CCDC136Q96JN2 1154 aa18.83■□□□□ 0.6
SCRIB-208ENST00000546337 ARPP21Q9UBL0 812 aaPredicted RBP18.83■□□□□ 0.6
SCRIB-208ENST00000546337 GSG1L2A8MUP6 293 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 PRKAB2O43741 272 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 PTPRAP18433 802 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 GJA5P36382 358 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 SLFNL1Q499Z3 407 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 MCMDC2Q4G0Z9 681 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 NOM1Q5C9Z4 860 aaKnown RBP18.82■□□□□ 0.6
SCRIB-208ENST00000546337 C12orf60Q5U649 245 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 RILPL2Q969X0 211 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 OTUD5Q96G74 571 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 MS4A4AQ96JQ5 239 aa18.82■□□□□ 0.6
SCRIB-208ENST00000546337 FOCADQ5VW36 1801 aa18.81■□□□□ 0.6
SCRIB-208ENST00000546337 MYH7P12883 1935 aa18.81■□□□□ 0.6
SCRIB-208ENST00000546337 CHGBP05060 677 aa18.81■□□□□ 0.6
SCRIB-208ENST00000546337 SDSP20132 328 aa18.81■□□□□ 0.6
SCRIB-208ENST00000546337 PLCD1P51178 756 aa18.81■□□□□ 0.6
SCRIB-208ENST00000546337 TTC22Q5TAA0 569 aa18.81■□□□□ 0.6
SCRIB-208ENST00000546337 AS3MTQ9HBK9 375 aa18.81■□□□□ 0.6
SCRIB-208ENST00000546337 PRDM10Q9NQV6 1147 aa18.81■□□□□ 0.6
SCRIB-208ENST00000546337 USP17L5A8MUK1 530 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 USP17L12C9JPN9 530 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 USP17L21D6R901 530 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 IRF6O14896 467 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 ALX1Q15699 326 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 IFNL1Q8IU54 200 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 CCDC17Q96LX7 622 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 WDR18Q9BV38 432 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 DNAJC18Q9H819 358 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 ZNF287Q9HBT7 754 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 RNF186Q9NXI6 227 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 AFG3L2Q9Y4W6 797 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 ZHX2Q9Y6X8 837 aa18.8■□□□□ 0.6
SCRIB-208ENST00000546337 M0R2C6 588 aa18.79■□□□□ 0.6
SCRIB-208ENST00000546337 FOXN1O15353 648 aa18.79■□□□□ 0.6
SCRIB-208ENST00000546337 CTR9Q6PD62 1173 aa18.79■□□□□ 0.6
SCRIB-208ENST00000546337 FASTKD5Q7L8L6 764 aaKnown RBP18.79■□□□□ 0.6
SCRIB-208ENST00000546337 IFNL3Q8IZI9 196 aa18.79■□□□□ 0.6
SCRIB-208ENST00000546337 CABP5Q9NP86 173 aa18.79■□□□□ 0.6
SCRIB-208ENST00000546337 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
SCRIB-208ENST00000546337 CCL15-CCL14A0A0B4J2E2 113 aa18.78■□□□□ 0.6
SCRIB-208ENST00000546337 CCL15Q16663 113 aa18.78■□□□□ 0.6
SCRIB-208ENST00000546337 CERKLQ49MI3 558 aaPredicted RBP18.78■□□□□ 0.6
SCRIB-208ENST00000546337 DIAPH3Q9NSV4 1193 aa18.78■□□□□ 0.6
SCRIB-208ENST00000546337 CDK5RAP2Q96SN8 1893 aa18.77■□□□□ 0.6
SCRIB-208ENST00000546337 FAM196BA6NMK8 535 aa18.77■□□□□ 0.6
SCRIB-208ENST00000546337 APPP05067 770 aa18.77■□□□□ 0.6
SCRIB-208ENST00000546337 SHMT1P34896 483 aa18.77■□□□□ 0.6
SCRIB-208ENST00000546337 MKRN3Q13064 507 aaKnown RBP18.77■□□□□ 0.6
SCRIB-208ENST00000546337 C16orf86Q6ZW13 317 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms