RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 BRPF3Q9ULD4 1205 aa22.84■■□□□ 1.25
SKP2-208ENST00000546211 GOLGA8BA8MQT2 603 aa22.83■■□□□ 1.25
SKP2-208ENST00000546211 WDHD1O75717 1129 aaPredicted RBP22.83■■□□□ 1.25
SKP2-208ENST00000546211 WTAPQ15007 396 aa22.83■■□□□ 1.25
SKP2-208ENST00000546211 SGMS1Q86VZ5 419 aa22.83■■□□□ 1.25
SKP2-208ENST00000546211 TMTC2Q8N394 836 aa22.83■■□□□ 1.25
SKP2-208ENST00000546211 LLPHQ9BRT6 129 aaKnown RBP22.83■■□□□ 1.25
SKP2-208ENST00000546211 DDX60LQ5H9U9 1706 aaKnown RBP22.83■■□□□ 1.24
SKP2-208ENST00000546211 FOCADQ5VW36 1801 aa22.83■■□□□ 1.24
SKP2-208ENST00000546211 ARFGEF1Q9Y6D6 1849 aa22.83■■□□□ 1.24
SKP2-208ENST00000546211 CCDC69A6NI79 296 aa22.82■■□□□ 1.24
SKP2-208ENST00000546211 CCT2P78371 535 aaKnown RBP22.82■■□□□ 1.24
SKP2-208ENST00000546211 IQCA1Q86XH1 822 aa22.82■■□□□ 1.24
SKP2-208ENST00000546211 AGBL3Q8NEM8 1001 aa22.82■■□□□ 1.24
SKP2-208ENST00000546211 ZKSCAN3Q9BRR0 538 aa22.82■■□□□ 1.24
SKP2-208ENST00000546211 FHDC1Q9C0D6 1143 aaPredicted RBP22.82■■□□□ 1.24
SKP2-208ENST00000546211 PLCD1P51178 756 aa22.81■■□□□ 1.24
SKP2-208ENST00000546211 CFAP100Q494V2 611 aa22.81■■□□□ 1.24
SKP2-208ENST00000546211 CIAPIN1Q6FI81 312 aa22.81■■□□□ 1.24
SKP2-208ENST00000546211 OGFOD1Q8N543 542 aa22.81■■□□□ 1.24
SKP2-208ENST00000546211 TNPO1Q92973 898 aaKnown RBP22.81■■□□□ 1.24
SKP2-208ENST00000546211 GMLQ99445 158 aa22.81■■□□□ 1.24
SKP2-208ENST00000546211 MKNK2Q9HBH9 465 aa22.81■■□□□ 1.24
SKP2-208ENST00000546211 DHX16O60231 1041 aaKnown RBP22.8■■□□□ 1.24
SKP2-208ENST00000546211 RASSF7Q02833 373 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 CXCL9Q07325 125 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 TNIP1Q15025 636 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 SYNE3Q6ZMZ3 975 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 TTC6Q86TZ1 520 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 DYNLL2Q96FJ2 89 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 TNKSO95271 1327 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 TSPY2A6NKD2 308 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 PKP1Q13835 747 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 NFKBIBQ15653 356 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 APOA5Q6Q788 366 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 ZSCAN10Q96SZ4 725 aaPredicted RBP22.8■■□□□ 1.24
SKP2-208ENST00000546211 DDX4Q9NQI0 724 aaKnown RBP22.8■■□□□ 1.24
SKP2-208ENST00000546211 PCDHAC2Q9Y5I4 1007 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 SLC12A7Q9Y666 1083 aa22.8■■□□□ 1.24
SKP2-208ENST00000546211 C16orf86Q6ZW13 317 aa22.79■■□□□ 1.24
SKP2-208ENST00000546211 OSBPL5Q9H0X9 879 aaPredicted RBP22.79■■□□□ 1.24
SKP2-208ENST00000546211 NCOA5Q9HCD5 579 aaKnown RBP22.79■■□□□ 1.24
SKP2-208ENST00000546211 ZBTB12Q9Y330 459 aaPredicted RBP22.79■■□□□ 1.24
SKP2-208ENST00000546211 WDR33Q9C0J8 1336 aaKnown RBP22.79■■□□□ 1.24
SKP2-208ENST00000546211 MYH1P12882 1939 aa22.78■■□□□ 1.24
SKP2-208ENST00000546211 ZBTB43O43298 467 aa22.78■■□□□ 1.24
SKP2-208ENST00000546211 PDIA4P13667 645 aaKnown RBP22.78■■□□□ 1.24
SKP2-208ENST00000546211 PDCP20941 246 aa22.78■■□□□ 1.24
SKP2-208ENST00000546211 METAP2P50579 478 aaKnown RBP eCLIP22.78■■□□□ 1.24
SKP2-208ENST00000546211 ZNF444Q8N0Y2 327 aaPredicted RBP22.78■■□□□ 1.24
SKP2-208ENST00000546211 IDI2Q9BXS1 227 aa22.78■■□□□ 1.24
SKP2-208ENST00000546211 SENP2Q9HC62 589 aa22.78■■□□□ 1.24
SKP2-208ENST00000546211 HPS5Q9UPZ3 1129 aa22.78■■□□□ 1.24
SKP2-208ENST00000546211 ECM29Q5VYK3 1845 aa22.78■■□□□ 1.24
SKP2-208ENST00000546211 BRD1O95696 1058 aa22.77■■□□□ 1.24
SKP2-208ENST00000546211 SYT1P21579 422 aa22.77■■□□□ 1.24
SKP2-208ENST00000546211 HMGN5P82970 282 aaKnown RBP22.77■■□□□ 1.24
SKP2-208ENST00000546211 SEC23AQ15436 765 aa22.77■■□□□ 1.24
SKP2-208ENST00000546211 FAM47AQ5JRC9 791 aa22.77■■□□□ 1.24
SKP2-208ENST00000546211 NSUN7Q8NE18 718 aaKnown RBP22.77■■□□□ 1.24
SKP2-208ENST00000546211 SMARCC2Q8TAQ2 1214 aa22.77■■□□□ 1.24
SKP2-208ENST00000546211 GBP4Q96PP9 640 aa22.77■■□□□ 1.24
SKP2-208ENST00000546211 KIF3AQ9Y496 699 aa22.77■■□□□ 1.24
SKP2-208ENST00000546211 CPLX1O14810 134 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 STX6O43752 255 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
SKP2-208ENST00000546211 HLA-DOAP06340 250 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 CDK8P49336 464 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 TFAP4Q01664 338 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 DLGAP5Q15398 846 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 MICU3Q86XE3 530 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 ENAHQ8N8S7 591 aaPredicted RBP22.76■■□□□ 1.23
SKP2-208ENST00000546211 ZDHHC9Q9Y397 364 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 PTPDC1A2A3K4 754 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 JAK2O60674 1132 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 DTNBO60941 627 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 EIF6P56537 245 aaKnown RBP22.76■■□□□ 1.23
SKP2-208ENST00000546211 NFIAQ12857 509 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 NBR1Q14596 966 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 CCDC178Q5BJE1 867 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 IFIT1BQ5T764 474 aaKnown RBP22.76■■□□□ 1.23
SKP2-208ENST00000546211 RAB11FIP4Q86YS3 637 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 FAM184AQ8NB25 1140 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 TDRD3Q9H7E2 651 aaKnown RBP22.76■■□□□ 1.23
SKP2-208ENST00000546211 TMOD2Q9NZR1 351 aa22.76■■□□□ 1.23
SKP2-208ENST00000546211 SPDYE2BA6NHP3 402 aa22.75■■□□□ 1.23
SKP2-208ENST00000546211 GOLGA8AA7E2F4 631 aa22.75■■□□□ 1.23
SKP2-208ENST00000546211 CTDNEP1O95476 244 aa22.75■■□□□ 1.23
SKP2-208ENST00000546211 SPDYE6P0CI01 402 aa22.75■■□□□ 1.23
SKP2-208ENST00000546211 TSPY3P0CV98 308 aa22.75■■□□□ 1.23
SKP2-208ENST00000546211 TSPY8P0CW00 308 aa22.75■■□□□ 1.23
SKP2-208ENST00000546211 LARP1BQ659C4 914 aaKnown RBP22.75■■□□□ 1.23
SKP2-208ENST00000546211 CPLX2Q6PUV4 134 aaKnown RBP22.75■■□□□ 1.23
SKP2-208ENST00000546211 SLC44A5Q8NCS7 719 aa22.75■■□□□ 1.23
SKP2-208ENST00000546211 PRMT6Q96LA8 375 aaPredicted RBP22.75■■□□□ 1.23
SKP2-208ENST00000546211 DHX36Q9H2U1 1008 aaKnown RBP22.75■■□□□ 1.23
SKP2-208ENST00000546211 RASA1P20936 1047 aa22.74■■□□□ 1.23
SKP2-208ENST00000546211 RPS12P25398 132 aaKnown RBP22.74■■□□□ 1.23
SKP2-208ENST00000546211 MMP14P50281 582 aa22.74■■□□□ 1.23
SKP2-208ENST00000546211 RCAN1P53805 252 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms