RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 DCAF15Q66K64 600 aa22.08■■□□□ 1.13
CCDC189-212ENST00000546006 ZNF408Q9H9D4 720 aa22.08■■□□□ 1.13
CCDC189-212ENST00000546006 HERC5Q9UII4 1024 aaKnown RBP22.08■■□□□ 1.13
CCDC189-212ENST00000546006 SERPINB13Q9UIV8 391 aa22.08■■□□□ 1.13
CCDC189-212ENST00000546006 SIPA1L1O43166 1804 aa22.07■■□□□ 1.12
CCDC189-212ENST00000546006 SMIM22K7EJ46 135 aa22.07■■□□□ 1.12
CCDC189-212ENST00000546006 MIGA2Q7L4E1 593 aa22.07■■□□□ 1.12
CCDC189-212ENST00000546006 RBM8AQ9Y5S9 174 aaKnown RBP22.07■■□□□ 1.12
CCDC189-212ENST00000546006 LAMB1P07942 1786 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 ROBO3Q96MS0 1386 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 CELF2O95319 508 aaKnown RBP22.06■■□□□ 1.12
CCDC189-212ENST00000546006 SLURP2P0DP57 97 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 GABPAQ06546 454 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 CRACR2BQ8N4Y2 399 aaPredicted RBP22.06■■□□□ 1.12
CCDC189-212ENST00000546006 TRIM34Q9BYJ4 488 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.06■■□□□ 1.12
CCDC189-212ENST00000546006 ANAPC4Q9UJX5 808 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 TAOK2Q9UL54 1235 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 ZNF213O14771 459 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 PPP1R12BO60237 982 aaPredicted RBP22.06■■□□□ 1.12
CCDC189-212ENST00000546006 IMMTQ16891 758 aaKnown RBP22.06■■□□□ 1.12
CCDC189-212ENST00000546006 DYNLL2Q96FJ2 89 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 ZNF341Q9BYN7 854 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 DNAJC18Q9H819 358 aa22.06■■□□□ 1.12
CCDC189-212ENST00000546006 FAM196BA6NMK8 535 aa22.05■■□□□ 1.12
CCDC189-212ENST00000546006 EPB41L2O43491 1005 aaKnown RBP22.05■■□□□ 1.12
CCDC189-212ENST00000546006 HAND2P61296 217 aa22.05■■□□□ 1.12
CCDC189-212ENST00000546006 PRKG1Q13976 671 aa22.05■■□□□ 1.12
CCDC189-212ENST00000546006 CST9Q5W186 159 aa22.05■■□□□ 1.12
CCDC189-212ENST00000546006 C16orf86Q6ZW13 317 aa22.05■■□□□ 1.12
CCDC189-212ENST00000546006 SWAP70Q9UH65 585 aa22.05■■□□□ 1.12
CCDC189-212ENST00000546006 USP2O75604 605 aaPredicted RBP22.04■■□□□ 1.12
CCDC189-212ENST00000546006 SLC3A2P08195 630 aaKnown RBP22.04■■□□□ 1.12
CCDC189-212ENST00000546006 CTDSPL2Q05D32 466 aa22.04■■□□□ 1.12
CCDC189-212ENST00000546006 FZD1Q9UP38 647 aa22.04■■□□□ 1.12
CCDC189-212ENST00000546006 SEC24BO95487 1268 aa22.03■■□□□ 1.12
CCDC189-212ENST00000546006 FKBP1BP68106 108 aa22.03■■□□□ 1.12
CCDC189-212ENST00000546006 NECTIN1Q15223 517 aa22.03■■□□□ 1.12
CCDC189-212ENST00000546006 SLC44A5Q8NCS7 719 aa22.03■■□□□ 1.12
CCDC189-212ENST00000546006 TRPM7Q96QT4 1865 aa22.03■■□□□ 1.12
CCDC189-212ENST00000546006 GBA2Q9HCG7 927 aaPredicted RBP22.03■■□□□ 1.12
CCDC189-212ENST00000546006 CYP21A2P08686 494 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 CDK8P49336 464 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 TTLL12Q14166 644 aaPredicted RBP22.02■■□□□ 1.12
CCDC189-212ENST00000546006 MAP3K11Q16584 847 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 TATDN1Q6P1N9 297 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 ARMC9Q7Z3E5 817 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 STK11IPQ8N1F8 1099 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 KLRG1Q96E93 195 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 USP26Q9BXU7 913 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 NBPF3Q9H094 633 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 ZNF112Q9UJU3 913 aa22.02■■□□□ 1.12
CCDC189-212ENST00000546006 ANGEL1Q9UNK9 670 aaKnown RBP22.02■■□□□ 1.12
CCDC189-212ENST00000546006 LAMA4Q16363 1823 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 PHF20L1A8MW92 1017 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 SHMT1P34896 483 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 IREB2P48200 963 aaKnown RBP22.01■■□□□ 1.11
CCDC189-212ENST00000546006 PDE4BQ07343 736 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 C2orf69Q8N8R5 385 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 ZNF287Q9HBT7 754 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 PAPPA2Q9BXP8 1791 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 CREB3L3Q68CJ9 461 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 MOB2Q70IA6 237 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 TBC1D10CQ8IV04 446 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.01■■□□□ 1.11
CCDC189-212ENST00000546006 STAG1Q8WVM7 1258 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 WRNIP1Q96S55 665 aa22.01■■□□□ 1.11
CCDC189-212ENST00000546006 SLC27A2O14975 620 aa22■■□□□ 1.11
CCDC189-212ENST00000546006 AKNAD1Q5T1N1 836 aa22■■□□□ 1.11
CCDC189-212ENST00000546006 RNF41Q9H4P4 317 aaPredicted RBP22■■□□□ 1.11
CCDC189-212ENST00000546006 MKNK2Q9HBH9 465 aa22■■□□□ 1.11
CCDC189-212ENST00000546006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22■■□□□ 1.11
CCDC189-212ENST00000546006 TACC3Q9Y6A5 838 aa22■■□□□ 1.11
CCDC189-212ENST00000546006 FGRP09769 529 aa21.99■■□□□ 1.11
CCDC189-212ENST00000546006 PCP11498 1178 aaKnown RBP21.99■■□□□ 1.11
CCDC189-212ENST00000546006 HSPA4P34932 840 aa21.99■■□□□ 1.11
CCDC189-212ENST00000546006 RNF20Q5VTR2 975 aa21.99■■□□□ 1.11
CCDC189-212ENST00000546006 INCENPQ9NQS7 918 aa21.99■■□□□ 1.11
CCDC189-212ENST00000546006 TMEM88BA6NKF7 163 aa21.98■■□□□ 1.11
CCDC189-212ENST00000546006 UBE2Q2LH0YL09 131 aa21.98■■□□□ 1.11
CCDC189-212ENST00000546006 PRDM1O75626 825 aa21.98■■□□□ 1.11
CCDC189-212ENST00000546006 MAP3K9P80192 1104 aa21.98■■□□□ 1.11
CCDC189-212ENST00000546006 RRP1BQ14684 758 aaKnown RBP21.98■■□□□ 1.11
CCDC189-212ENST00000546006 CERKLQ49MI3 558 aaPredicted RBP21.98■■□□□ 1.11
CCDC189-212ENST00000546006 MFSD6Q6ZSS7 791 aa21.98■■□□□ 1.11
CCDC189-212ENST00000546006 BACH2Q9BYV9 841 aa21.98■■□□□ 1.11
CCDC189-212ENST00000546006 TAF6LQ9Y6J9 622 aa21.98■■□□□ 1.11
CCDC189-212ENST00000546006 ORC4O43929 436 aa21.97■■□□□ 1.11
CCDC189-212ENST00000546006 CTNND1O60716 968 aaKnown RBP21.97■■□□□ 1.11
CCDC189-212ENST00000546006 RASA1P20936 1047 aa21.97■■□□□ 1.11
CCDC189-212ENST00000546006 INPP5BP32019 993 aa21.97■■□□□ 1.11
CCDC189-212ENST00000546006 CAP2P40123 477 aa21.97■■□□□ 1.11
CCDC189-212ENST00000546006 LDLRAD1Q5T700 205 aa21.97■■□□□ 1.11
CCDC189-212ENST00000546006 ANKRD13AQ8IZ07 590 aa21.97■■□□□ 1.11
CCDC189-212ENST00000546006 UNCXA6NJT0 531 aa21.96■■□□□ 1.11
CCDC189-212ENST00000546006 GDF11O95390 407 aa21.96■■□□□ 1.11
CCDC189-212ENST00000546006 MCCP23508 829 aa21.96■■□□□ 1.11
CCDC189-212ENST00000546006 APLP1P51693 650 aa21.96■■□□□ 1.11
CCDC189-212ENST00000546006 NOL9Q5SY16 702 aaKnown RBP21.96■■□□□ 1.11
CCDC189-212ENST00000546006 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms