RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 PI4KBQ9UBF8 816 aa27.75■■■□□ 2.03
CHD4-214ENST00000545942 DOCK1Q14185 1865 aa27.74■■■□□ 2.03
CHD4-214ENST00000545942 CYP2C8P10632 490 aa27.74■■■□□ 2.03
CHD4-214ENST00000545942 CHMP4BQ9H444 224 aaKnown RBP27.74■■■□□ 2.03
CHD4-214ENST00000545942 IL1RAPL2Q9NP60 686 aa27.74■■■□□ 2.03
CHD4-214ENST00000545942 SLC45A1Q9Y2W3 748 aa27.74■■■□□ 2.03
CHD4-214ENST00000545942 TNRC18O15417 2968 aaPredicted RBP27.73■■■□□ 2.03
CHD4-214ENST00000545942 CENPFP49454 3210 aa27.73■■■□□ 2.03
CHD4-214ENST00000545942 POTEFA5A3E0 1075 aa27.73■■■□□ 2.03
CHD4-214ENST00000545942 CYP7A1P22680 504 aa27.73■■■□□ 2.03
CHD4-214ENST00000545942 PRMT2P55345 433 aa27.73■■■□□ 2.03
CHD4-214ENST00000545942 CCDC84Q86UT8 332 aaPredicted RBP27.73■■■□□ 2.03
CHD4-214ENST00000545942 MAPKAPK5Q8IW41 473 aa27.73■■■□□ 2.03
CHD4-214ENST00000545942 ZNF333Q96JL9 665 aa27.73■■■□□ 2.03
CHD4-214ENST00000545942 FLT1P17948 1338 aa27.73■■■□□ 2.03
CHD4-214ENST00000545942 CAP2P40123 477 aa27.72■■■□□ 2.03
CHD4-214ENST00000545942 PSMC4P43686 418 aa27.72■■■□□ 2.03
CHD4-214ENST00000545942 KIF1BPQ96EK5 621 aa27.72■■■□□ 2.03
CHD4-214ENST00000545942 TBC1D2Q9BYX2 928 aa27.72■■■□□ 2.03
CHD4-214ENST00000545942 CERS3Q8IU89 383 aa27.71■■■□□ 2.03
CHD4-214ENST00000545942 CLASRPQ8N2M8 674 aaKnown RBP27.71■■■□□ 2.03
CHD4-214ENST00000545942 TRIM47Q96LD4 638 aa27.71■■■□□ 2.03
CHD4-214ENST00000545942 NDUFB9Q9Y6M9 179 aa27.71■■■□□ 2.03
CHD4-214ENST00000545942 ECM2O94769 699 aaPredicted RBP27.7■■■□□ 2.03
CHD4-214ENST00000545942 BCRP11274 1271 aa27.7■■■□□ 2.03
CHD4-214ENST00000545942 HOXD10P28358 340 aa27.7■■■□□ 2.03
CHD4-214ENST00000545942 CTGFP29279 349 aa27.7■■■□□ 2.03
CHD4-214ENST00000545942 MAP3K12Q12852 859 aa27.7■■■□□ 2.03
CHD4-214ENST00000545942 TMED8Q6PL24 325 aaPredicted RBP27.7■■■□□ 2.03
CHD4-214ENST00000545942 SIRT2Q8IXJ6 389 aa27.7■■■□□ 2.03
CHD4-214ENST00000545942 ANTXR1Q9H6X2 564 aa27.7■■■□□ 2.03
CHD4-214ENST00000545942 AGTPBP1Q9UPW5 1226 aa27.7■■■□□ 2.03
CHD4-214ENST00000545942 FMNL1O95466 1100 aaPredicted RBP27.69■■■□□ 2.02
CHD4-214ENST00000545942 DYNLL1P63167 89 aaKnown RBP27.69■■■□□ 2.02
CHD4-214ENST00000545942 SPP2Q13103 211 aa27.69■■■□□ 2.02
CHD4-214ENST00000545942 RRP1BQ14684 758 aaKnown RBP27.69■■■□□ 2.02
CHD4-214ENST00000545942 FOXP4Q8IVH2 680 aaPredicted RBP27.69■■■□□ 2.02
CHD4-214ENST00000545942 MAGEB6Q8N7X4 407 aa27.69■■■□□ 2.02
CHD4-214ENST00000545942 ZNF280CQ8ND82 737 aa27.69■■■□□ 2.02
CHD4-214ENST00000545942 TMEM106CQ9BVX2 250 aa27.69■■■□□ 2.02
CHD4-214ENST00000545942 SRRDQ9UH36 339 aa27.69■■■□□ 2.02
CHD4-214ENST00000545942 PALD1Q9ULE6 856 aa27.69■■■□□ 2.02
CHD4-214ENST00000545942 APBB1O00213 710 aa27.68■■■□□ 2.02
CHD4-214ENST00000545942 METTL16Q86W50 562 aaKnown RBP27.68■■■□□ 2.02
CHD4-214ENST00000545942 PROCA1Q8NCQ7 364 aaPredicted RBP27.68■■■□□ 2.02
CHD4-214ENST00000545942 TRIM34Q9BYJ4 488 aa27.68■■■□□ 2.02
CHD4-214ENST00000545942 ZSWIM8A7E2V4 1837 aa27.68■■■□□ 2.02
CHD4-214ENST00000545942 PHIPQ8WWQ0 1821 aa27.68■■■□□ 2.02
CHD4-214ENST00000545942 USP17L5A8MUK1 530 aa27.67■■■□□ 2.02
CHD4-214ENST00000545942 OSBPP22059 807 aa27.67■■■□□ 2.02
CHD4-214ENST00000545942 CRACR2BQ8N4Y2 399 aaPredicted RBP27.67■■■□□ 2.02
CHD4-214ENST00000545942 MIGA1Q8NAN2 632 aa27.67■■■□□ 2.02
CHD4-214ENST00000545942 SMCR8Q8TEV9 937 aaPredicted RBP27.67■■■□□ 2.02
CHD4-214ENST00000545942 RAB11FIP3O75154 756 aa27.67■■■□□ 2.02
CHD4-214ENST00000545942 HLA-DOAP06340 250 aa27.67■■■□□ 2.02
CHD4-214ENST00000545942 IFIT2P09913 472 aaKnown RBP27.67■■■□□ 2.02
CHD4-214ENST00000545942 TTF1Q15361 905 aaPredicted RBP27.67■■■□□ 2.02
CHD4-214ENST00000545942 SH3TC2Q8TF17 1288 aa27.67■■■□□ 2.02
CHD4-214ENST00000545942 DNAJC18Q9H819 358 aa27.67■■■□□ 2.02
CHD4-214ENST00000545942 AS3MTQ9HBK9 375 aa27.67■■■□□ 2.02
CHD4-214ENST00000545942 SAP30BPQ9UHR5 308 aaKnown RBP27.67■■■□□ 2.02
CHD4-214ENST00000545942 ASNSP08243 561 aa27.66■■■□□ 2.02
CHD4-214ENST00000545942 FCGRTP55899 365 aa27.66■■■□□ 2.02
CHD4-214ENST00000545942 PDE3AQ14432 1141 aa27.66■■■□□ 2.02
CHD4-214ENST00000545942 PNMA3Q9UL41 463 aa27.66■■■□□ 2.02
CHD4-214ENST00000545942 MYO5AQ9Y4I1 1855 aaKnown RBP27.65■■■□□ 2.02
CHD4-214ENST00000545942 TREML2Q5T2D2 321 aa27.65■■■□□ 2.02
CHD4-214ENST00000545942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.65■■■□□ 2.02
CHD4-214ENST00000545942 PTPRFP10586 1907 aa27.64■■■□□ 2.02
CHD4-214ENST00000545942 BRCA2P51587 3418 aa27.64■■■□□ 2.02
CHD4-214ENST00000545942 MYPNQ86TC9 1320 aa27.64■■■□□ 2.02
CHD4-214ENST00000545942 EN2P19622 333 aaPredicted RBP27.64■■■□□ 2.01
CHD4-214ENST00000545942 USP5P45974 858 aa27.64■■■□□ 2.01
CHD4-214ENST00000545942 HMGCS2P54868 508 aa27.64■■■□□ 2.01
CHD4-214ENST00000545942 SLC4A8Q2Y0W8 1093 aa27.64■■■□□ 2.01
CHD4-214ENST00000545942 PRPF38BQ5VTL8 546 aaKnown RBP27.64■■■□□ 2.01
CHD4-214ENST00000545942 RAET1EQ8TD07 263 aa27.64■■■□□ 2.01
CHD4-214ENST00000545942 SIPA1L1O43166 1804 aa27.63■■■□□ 2.01
CHD4-214ENST00000545942 PDE4DIPQ5VU43 2346 aa27.63■■■□□ 2.01
CHD4-214ENST00000545942 RBBP6Q7Z6E9 1792 aaKnown RBP27.63■■■□□ 2.01
CHD4-214ENST00000545942 SH3D19Q5HYK7 790 aa27.63■■■□□ 2.01
CHD4-214ENST00000545942 C20orf194Q5TEA3 1177 aa27.63■■■□□ 2.01
CHD4-214ENST00000545942 WDR18Q9BV38 432 aa27.63■■■□□ 2.01
CHD4-214ENST00000545942 GINM1Q9NU53 330 aa27.63■■■□□ 2.01
CHD4-214ENST00000545942 FOCADQ5VW36 1801 aa27.62■■■□□ 2.01
CHD4-214ENST00000545942 PABPC4Q13310 644 aaKnown RBP eCLIP27.62■■■□□ 2.01
CHD4-214ENST00000545942 BCL11AQ9H165 835 aa27.62■■■□□ 2.01
CHD4-214ENST00000545942 MYCP01106 439 aaPredicted RBP27.61■■■□□ 2.01
CHD4-214ENST00000545942 DNAJC2Q99543 621 aaKnown RBP27.61■■■□□ 2.01
CHD4-214ENST00000545942 CDK5RAP2Q96SN8 1893 aa27.61■■■□□ 2.01
CHD4-214ENST00000545942 GDF11O95390 407 aa27.6■■■□□ 2.01
CHD4-214ENST00000545942 GRK4P32298 578 aa27.6■■■□□ 2.01
CHD4-214ENST00000545942 JAG1P78504 1218 aa27.6■■■□□ 2.01
CHD4-214ENST00000545942 PRKCZQ05513 592 aa27.6■■■□□ 2.01
CHD4-214ENST00000545942 SLC9C2Q5TAH2 1124 aa27.6■■■□□ 2.01
CHD4-214ENST00000545942 ANKRD13CQ8N6S4 541 aa27.6■■■□□ 2.01
CHD4-214ENST00000545942 RIOK1Q9BRS2 568 aaKnown RBP27.6■■■□□ 2.01
CHD4-214ENST00000545942 ATAD5Q96QE3 1844 aa27.6■■■□□ 2.01
CHD4-214ENST00000545942 GOLIM4O00461 696 aa27.59■■■□□ 2.01
CHD4-214ENST00000545942 PDE6AP16499 860 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms