RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 MGAMO43451 1857 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 IL16Q14005 1332 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 MAP4K4O95819 1239 aaPredicted RBP9.15□□□□□ -0.94
COPA-207ENST00000545284 LDHBP07195 334 aaKnown RBP9.15□□□□□ -0.94
COPA-207ENST00000545284 FGFR2P21802 821 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 RGS3P49796 1198 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 SPP2Q13103 211 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 RABL6Q3YEC7 729 aaPredicted RBP9.15□□□□□ -0.94
COPA-207ENST00000545284 AKNAD1Q5T1N1 836 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 ZSCAN29Q8IWY8 852 aaPredicted RBP9.15□□□□□ -0.94
COPA-207ENST00000545284 ZFPM1Q8IX07 1006 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 ZGPATQ8N5A5 531 aaKnown RBP9.15□□□□□ -0.94
COPA-207ENST00000545284 ARRDC4Q8NCT1 418 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 LPIN2Q92539 896 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 ASB2Q96Q27 587 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 APBA2Q99767 749 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
COPA-207ENST00000545284 EYSQ5T1H1 3165 aa9.14□□□□□ -0.95
COPA-207ENST00000545284 DDX60LQ5H9U9 1706 aaKnown RBP9.14□□□□□ -0.95
COPA-207ENST00000545284 SEMA3EO15041 775 aa9.14□□□□□ -0.95
COPA-207ENST00000545284 GLRX3O76003 335 aaKnown RBP9.14□□□□□ -0.95
COPA-207ENST00000545284 RTP1P59025 263 aa9.14□□□□□ -0.95
COPA-207ENST00000545284 IRX3P78415 501 aaPredicted RBP9.14□□□□□ -0.95
COPA-207ENST00000545284 SNX17Q15036 470 aa9.14□□□□□ -0.95
COPA-207ENST00000545284 DIXDC1Q155Q3 683 aa9.14□□□□□ -0.95
COPA-207ENST00000545284 MORN1Q5T089 497 aa9.14□□□□□ -0.95
COPA-207ENST00000545284 MFSD14CQ5VZR4 134 aa9.14□□□□□ -0.95
COPA-207ENST00000545284 CCAR1Q8IX12 1150 aaKnown RBP9.14□□□□□ -0.95
COPA-207ENST00000545284 GINM1Q9NU53 330 aa9.14□□□□□ -0.95
COPA-207ENST00000545284 GNL3LQ9NVN8 582 aaKnown RBP9.14□□□□□ -0.95
COPA-207ENST00000545284 DDX20Q9UHI6 824 aaKnown RBP9.14□□□□□ -0.95
COPA-207ENST00000545284 UTYO14607 1347 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 GAKO14976 1311 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.13□□□□□ -0.95
COPA-207ENST00000545284 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.13□□□□□ -0.95
COPA-207ENST00000545284 USP17L5A8MUK1 530 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 C19orf81C9J6K1 198 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 SLC5A1P13866 664 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 PRDX5P30044 214 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 CCND3P30281 292 aaPredicted RBP9.13□□□□□ -0.95
COPA-207ENST00000545284 HMGCS2P54868 508 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 MRPS5P82675 430 aaKnown RBP9.13□□□□□ -0.95
COPA-207ENST00000545284 C9orf50Q5SZB4 431 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 SLC39A5Q6ZMH5 540 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 EDC3Q96F86 508 aaKnown RBP9.13□□□□□ -0.95
COPA-207ENST00000545284 WDR18Q9BV38 432 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 DENND2AQ9ULE3 1009 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 LAMA2P24043 3122 aaKnown RBP9.13□□□□□ -0.95
COPA-207ENST00000545284 PRUNE2Q8WUY3 3088 aa9.13□□□□□ -0.95
COPA-207ENST00000545284 DDTLA6NHG4 134 aaPredicted RBP9.12□□□□□ -0.95
COPA-207ENST00000545284 VAMP4O75379 141 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 HOXC6P09630 235 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 BACE1P56817 501 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 HERVK_113P62684 666 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 CCNA1P78396 465 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 MAP2K5Q13163 448 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 LRRC24Q50LG9 513 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 GPR142Q7Z601 462 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 PLEKHH3Q7Z736 793 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 IL27Q8NEV9 243 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 ADAMTS19Q8TE59 1207 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 BADQ92934 168 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 TSR2Q969E8 191 aaKnown RBP9.12□□□□□ -0.95
COPA-207ENST00000545284 KAZALD1Q96I82 304 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 UHRF1Q96T88 793 aaPredicted RBP9.12□□□□□ -0.95
COPA-207ENST00000545284 GAS2L1Q99501 681 aaPredicted RBP9.12□□□□□ -0.95
COPA-207ENST00000545284 P2RX7Q99572 595 aaKnown RBP9.12□□□□□ -0.95
COPA-207ENST00000545284 SRCIN1Q9C0H9 1055 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.12□□□□□ -0.95
COPA-207ENST00000545284 TMOD4Q9NZQ9 345 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 THEGQ9P2T0 379 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 RBPJLQ9UBG7 517 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 HERC5Q9UII4 1024 aaKnown RBP9.12□□□□□ -0.95
COPA-207ENST00000545284 FBXO3Q9UK99 471 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 HCN4Q9Y3Q4 1203 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 TACC3Q9Y6A5 838 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 CDH23Q9H251 3354 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 RFX7Q2KHR2 1363 aa9.12□□□□□ -0.95
COPA-207ENST00000545284 F6X3S4 739 aa9.11□□□□□ -0.95
COPA-207ENST00000545284 CAP2P40123 477 aa9.11□□□□□ -0.95
COPA-207ENST00000545284 ATN1P54259 1190 aaPredicted RBP9.11□□□□□ -0.95
COPA-207ENST00000545284 ERVK-9P63128 1117 aa9.11□□□□□ -0.95
COPA-207ENST00000545284 ERVK-24P63145 666 aa9.11□□□□□ -0.95
COPA-207ENST00000545284 GRIN2CQ14957 1233 aa9.11□□□□□ -0.95
COPA-207ENST00000545284 SPTY2D1Q68D10 685 aaPredicted RBP9.11□□□□□ -0.95
COPA-207ENST00000545284 RAPGEFL1Q9UHV5 662 aa9.11□□□□□ -0.95
COPA-207ENST00000545284 ATP11BQ9Y2G3 1177 aa9.11□□□□□ -0.95
COPA-207ENST00000545284 A0A1B0GUL6 1792 aa9.11□□□□□ -0.95
COPA-207ENST00000545284 PDS5AQ29RF7 1337 aaKnown RBP9.1□□□□□ -0.95
COPA-207ENST00000545284 SLC15A5A6NIM6 579 aa9.1□□□□□ -0.95
COPA-207ENST00000545284 KBTBD13C9JR72 458 aa9.1□□□□□ -0.95
COPA-207ENST00000545284 ASNSP08243 561 aa9.1□□□□□ -0.95
COPA-207ENST00000545284 CCL14Q16627 93 aa9.1□□□□□ -0.95
COPA-207ENST00000545284 WWC1Q8IX03 1113 aa9.1□□□□□ -0.95
COPA-207ENST00000545284 USP38Q8NB14 1042 aa9.1□□□□□ -0.95
COPA-207ENST00000545284 SUCLG2Q96I99 432 aa9.1□□□□□ -0.95
COPA-207ENST00000545284 RNPC3Q96LT9 517 aaKnown RBP9.1□□□□□ -0.95
COPA-207ENST00000545284 TSPYL2Q9H2G4 693 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms