RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 CCDC171Q6TFL3 1326 aa16.56■□□□□ 0.24
TSEN54-203ENST00000545228 PPP1R12BO60237 982 aaPredicted RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 WDHD1O75717 1129 aaPredicted RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 DYNLL1P63167 89 aaKnown RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 SREBF2Q12772 1141 aa16.56■□□□□ 0.24
TSEN54-203ENST00000545228 MKRN3Q13064 507 aaKnown RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 NMIQ13287 307 aaPredicted RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 PRKG1Q13976 671 aa16.56■□□□□ 0.24
TSEN54-203ENST00000545228 PKN2Q16513 984 aaKnown RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 LCORLQ8N3X6 602 aa16.56■□□□□ 0.24
TSEN54-203ENST00000545228 ZNF296Q8WUU4 475 aaPredicted RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
TSEN54-203ENST00000545228 PUS7LQ9H0K6 701 aaKnown RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 ARPP21Q9UBL0 812 aaPredicted RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 APPP05067 770 aa16.55■□□□□ 0.24
TSEN54-203ENST00000545228 TDO2P48775 406 aa16.55■□□□□ 0.24
TSEN54-203ENST00000545228 TCP10Q12799 353 aa16.55■□□□□ 0.24
TSEN54-203ENST00000545228 CWC27Q6UX04 472 aaKnown RBP16.55■□□□□ 0.24
TSEN54-203ENST00000545228 KIAA1211Q6ZU35 1233 aa16.55■□□□□ 0.24
TSEN54-203ENST00000545228 STRBPQ96SI9 672 aaKnown RBP16.55■□□□□ 0.24
TSEN54-203ENST00000545228 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
TSEN54-203ENST00000545228 PATL2C9JE40 543 aaKnown RBP16.54■□□□□ 0.24
TSEN54-203ENST00000545228 POLR3DP05423 398 aaPredicted RBP16.54■□□□□ 0.24
TSEN54-203ENST00000545228 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
TSEN54-203ENST00000545228 CHMLP26374 656 aa16.54■□□□□ 0.24
TSEN54-203ENST00000545228 CACNB3P54284 484 aa16.54■□□□□ 0.24
TSEN54-203ENST00000545228 NOM1Q5C9Z4 860 aaKnown RBP16.54■□□□□ 0.24
TSEN54-203ENST00000545228 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
TSEN54-203ENST00000545228 NAPBQ9H115 298 aa16.54■□□□□ 0.24
TSEN54-203ENST00000545228 ZNF287Q9HBT7 754 aa16.54■□□□□ 0.24
TSEN54-203ENST00000545228 PI4KBQ9UBF8 816 aa16.54■□□□□ 0.24
TSEN54-203ENST00000545228 FAM198AQ9UFP1 575 aa16.54■□□□□ 0.24
TSEN54-203ENST00000545228 HERC5Q9UII4 1024 aaKnown RBP16.54■□□□□ 0.24
TSEN54-203ENST00000545228 ANGEL1Q9UNK9 670 aaKnown RBP16.54■□□□□ 0.24
TSEN54-203ENST00000545228 HPS5Q9UPZ3 1129 aa16.54■□□□□ 0.24
TSEN54-203ENST00000545228 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 UNCXA6NJT0 531 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 M0R2C6 588 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 GPR25O00155 361 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 NFIAQ12857 509 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 LDLRAD1Q5T700 205 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
TSEN54-203ENST00000545228 FAM227BQ96M60 508 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 MCM9Q9NXL9 1143 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 LAMA4Q16363 1823 aa16.53■□□□□ 0.24
TSEN54-203ENST00000545228 IREB2P48200 963 aaKnown RBP16.52■□□□□ 0.24
TSEN54-203ENST00000545228 SPRYD7Q5W111 196 aa16.52■□□□□ 0.24
TSEN54-203ENST00000545228 FOXP4Q8IVH2 680 aaPredicted RBP16.52■□□□□ 0.24
TSEN54-203ENST00000545228 SDR42E1Q8WUS8 393 aa16.52■□□□□ 0.24
TSEN54-203ENST00000545228 EHD4Q9H223 541 aa16.52■□□□□ 0.24
TSEN54-203ENST00000545228 DCP1AQ9NPI6 582 aaPredicted RBP16.52■□□□□ 0.24
TSEN54-203ENST00000545228 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.24
TSEN54-203ENST00000545228 TBC1D12O60347 775 aa16.51■□□□□ 0.23
TSEN54-203ENST00000545228 NT5C2P49902 561 aa16.51■□□□□ 0.23
TSEN54-203ENST00000545228 SLC10A4Q96EP9 437 aa16.51■□□□□ 0.23
TSEN54-203ENST00000545228 DSCC1Q9BVC3 393 aa16.51■□□□□ 0.23
TSEN54-203ENST00000545228 CFHR5Q9BXR6 569 aa16.51■□□□□ 0.23
TSEN54-203ENST00000545228 ZNF341Q9BYN7 854 aa16.51■□□□□ 0.23
TSEN54-203ENST00000545228 DDX4Q9NQI0 724 aaKnown RBP16.51■□□□□ 0.23
TSEN54-203ENST00000545228 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
TSEN54-203ENST00000545228 FZD1Q9UP38 647 aa16.51■□□□□ 0.23
TSEN54-203ENST00000545228 ATAD5Q96QE3 1844 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 MANSC4A6NHS7 340 aaPredicted RBP16.5■□□□□ 0.23
TSEN54-203ENST00000545228 SGSM2O43147 1006 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 FKTNO75072 461 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 REC8O95072 547 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 ALDH1A1P00352 501 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 INHBEP58166 350 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 ALX1Q15699 326 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 MAP3K11Q16584 847 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 SBK1Q52WX2 424 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
TSEN54-203ENST00000545228 SERPINB13Q9UIV8 391 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 DOCK1Q14185 1865 aa16.5■□□□□ 0.23
TSEN54-203ENST00000545228 GSG1L2A8MUP6 293 aa16.49■□□□□ 0.23
TSEN54-203ENST00000545228 PCP11498 1178 aaKnown RBP16.49■□□□□ 0.23
TSEN54-203ENST00000545228 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
TSEN54-203ENST00000545228 NBPF12Q5TAG4 269 aaPredicted RBP16.49■□□□□ 0.23
TSEN54-203ENST00000545228 FBXO46Q6PJ61 603 aaPredicted RBP16.49■□□□□ 0.23
TSEN54-203ENST00000545228 SKAP1Q86WV1 359 aa16.49■□□□□ 0.23
TSEN54-203ENST00000545228 IFNL3Q8IZI9 196 aa16.49■□□□□ 0.23
TSEN54-203ENST00000545228 TEPSINQ96N21 525 aa16.49■□□□□ 0.23
TSEN54-203ENST00000545228 ESYT1Q9BSJ8 1104 aa16.49■□□□□ 0.23
TSEN54-203ENST00000545228 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.49■□□□□ 0.23
TSEN54-203ENST00000545228 CSADQ9Y600 493 aa16.49■□□□□ 0.23
TSEN54-203ENST00000545228 OTOFQ9HC10 1997 aa16.48■□□□□ 0.23
TSEN54-203ENST00000545228 SIPA1L1O43166 1804 aa16.48■□□□□ 0.23
TSEN54-203ENST00000545228 EPB41L2O43491 1005 aaKnown RBP16.48■□□□□ 0.23
TSEN54-203ENST00000545228 ZBTB48P10074 688 aaPredicted RBP16.48■□□□□ 0.23
TSEN54-203ENST00000545228 HSPD1P10809 573 aaKnown RBP16.48■□□□□ 0.23
TSEN54-203ENST00000545228 R3HDMLQ9H3Y0 253 aa16.48■□□□□ 0.23
TSEN54-203ENST00000545228 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.23
TSEN54-203ENST00000545228 GINM1Q9NU53 330 aa16.48■□□□□ 0.23
TSEN54-203ENST00000545228 SAP30BPQ9UHR5 308 aaKnown RBP16.48■□□□□ 0.23
TSEN54-203ENST00000545228 PALD1Q9ULE6 856 aa16.48■□□□□ 0.23
TSEN54-203ENST00000545228 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
TSEN54-203ENST00000545228 DDTLA6NHG4 134 aaPredicted RBP16.47■□□□□ 0.23
TSEN54-203ENST00000545228 USP17L12C9JPN9 530 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 USP17L21D6R901 530 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms