RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 ATG3Q9NT62 314 aa9.9□□□□□ -0.82
CCDC7-210ENST00000545067 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
CCDC7-210ENST00000545067 PCDHB6Q9Y5E3 794 aa9.9□□□□□ -0.82
CCDC7-210ENST00000545067 BAZ2BQ9UIF8 2168 aaKnown RBP9.9□□□□□ -0.83
CCDC7-210ENST00000545067 NCAPD2Q15021 1401 aa9.9□□□□□ -0.83
CCDC7-210ENST00000545067 TMEM232C9JQI7 657 aa9.9□□□□□ -0.83
CCDC7-210ENST00000545067 GUCY1A2P33402 732 aa9.9□□□□□ -0.83
CCDC7-210ENST00000545067 PPARAQ07869 468 aa9.9□□□□□ -0.83
CCDC7-210ENST00000545067 STIM1Q13586 685 aa9.9□□□□□ -0.83
CCDC7-210ENST00000545067 KRBA2Q6ZNG9 492 aa9.9□□□□□ -0.83
CCDC7-210ENST00000545067 MB21D2Q8IYB1 491 aaPredicted RBP9.9□□□□□ -0.83
CCDC7-210ENST00000545067 ZNHIT6Q9NWK9 470 aaKnown RBP9.9□□□□□ -0.83
CCDC7-210ENST00000545067 ANKRD26Q9UPS8 1709 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 SH2B2O14492 632 aaPredicted RBP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 PHACTR2O75167 634 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 RHOXF2BP0C7M4 288 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 EVCP57679 992 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 CHRNDQ07001 517 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 CCDC178Q5BJE1 867 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 ZNF569Q5MCW4 686 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 SUSD4Q5VX71 490 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 NLRP3Q96P20 1036 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 STRBPQ96SI9 672 aaKnown RBP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 RHOXF2Q9BQY4 288 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 CRNKL1Q9BZJ0 848 aaKnown RBP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 ZNF219Q9P2Y4 722 aaPredicted RBP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 CTNND2Q9UQB3 1225 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 A0A1W2PQ27 194 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 A0A1W2PQ64 194 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 A0A1W2PQD8 194 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 STAT6P42226 847 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 ANTXR2P58335 489 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 PDE4BQ07343 736 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 NCBP1Q09161 790 aaKnown RBP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 IGSF22Q8N9C0 903 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 KCNB2Q92953 911 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 ERO1AQ96HE7 468 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 TRIM47Q96LD4 638 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 ZNF335Q9H4Z2 1342 aaPredicted RBP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 COL15A1P39059 1388 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 C6orf229H3BNL8 230 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 MPHOSPH10O00566 681 aaKnown RBP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 MATR3P43243 847 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 UBE3CQ15386 1083 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 DHX40Q8IX18 779 aaKnown RBP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 SETDB2Q96T68 719 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 SAMSN1Q9NSI8 373 aaKnown RBP9.89□□□□□ -0.83
CCDC7-210ENST00000545067 SPTLC3Q9NUV7 552 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 CCDC87Q9NVE4 849 aa9.89□□□□□ -0.83
CCDC7-210ENST00000545067 TSPY3P0CV98 308 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 TSPY8P0CW00 308 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 NOM1Q5C9Z4 860 aaKnown RBP9.88□□□□□ -0.83
CCDC7-210ENST00000545067 RASGRP4Q8TDF6 673 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 DPF2Q92785 391 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 EPSTI1Q96J88 318 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 HINFPQ9BQA5 517 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 CSRNP2Q9H175 543 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 EPC1Q9H2F5 836 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 PEAK1Q9H792 1746 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 KRT18P05783 430 aaKnown RBP9.88□□□□□ -0.83
CCDC7-210ENST00000545067 EIF6P56537 245 aaKnown RBP9.88□□□□□ -0.83
CCDC7-210ENST00000545067 BMS1Q14692 1282 aaKnown RBP9.88□□□□□ -0.83
CCDC7-210ENST00000545067 PPP1R13BQ96KQ4 1090 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 ISCA1Q9BUE6 129 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 TAB2Q9NYJ8 693 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 GUCA1BQ9UMX6 200 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 C1orf167Q5SNV9 1468 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 GNAT2P19087 354 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 MTIF2P46199 727 aaKnown RBP9.88□□□□□ -0.83
CCDC7-210ENST00000545067 KANK3Q6NY19 840 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 TRMT1LQ7Z2T5 733 aaKnown RBP9.88□□□□□ -0.83
CCDC7-210ENST00000545067 ZSCAN29Q8IWY8 852 aaPredicted RBP9.88□□□□□ -0.83
CCDC7-210ENST00000545067 GPKOWQ92917 476 aaPredicted RBP eCLIP9.88□□□□□ -0.83
CCDC7-210ENST00000545067 MEGF6O75095 1541 aa9.88□□□□□ -0.83
CCDC7-210ENST00000545067 KDM6AO15550 1401 aaPredicted RBP9.87□□□□□ -0.83
CCDC7-210ENST00000545067 RBM5P52756 815 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC7-210ENST00000545067 PICALMQ13492 652 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 MEX3CQ5U5Q3 659 aaKnown RBP9.87□□□□□ -0.83
CCDC7-210ENST00000545067 JAKMIP3Q5VZ66 844 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 ZNF710Q8N1W2 664 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 OGFRQ9NZT2 677 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 FAM170AA1A519 330 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 CCDC175P0C221 793 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 GOLGA8HP0CJ92 632 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 CRKLP46109 303 aaKnown RBP9.87□□□□□ -0.83
CCDC7-210ENST00000545067 CAPZA3Q96KX2 299 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 C8orf37Q96NL8 207 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 MROH5Q6ZUA9 1318 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 FAM205CA6NFA0 338 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 EPS15P42566 896 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 RBM6P78332 1123 aaKnown RBP9.87□□□□□ -0.83
CCDC7-210ENST00000545067 UBXN1Q04323 297 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 TTC38Q5R3I4 469 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 AXDND1Q5T1B0 1012 aaPredicted RBP9.87□□□□□ -0.83
CCDC7-210ENST00000545067 FKBP15Q5T1M5 1219 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 SHC4Q6S5L8 630 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 USP49Q70CQ1 688 aa9.87□□□□□ -0.83
CCDC7-210ENST00000545067 TRIM21P19474 475 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms