RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 TLR2O60603 784 aa16.89■□□□□ 0.29
VAMP1-208ENST00000544432 PDE6AP16499 860 aa16.89■□□□□ 0.29
VAMP1-208ENST00000544432 SLC9C2Q5TAH2 1124 aa16.89■□□□□ 0.29
VAMP1-208ENST00000544432 FBXO46Q6PJ61 603 aaPredicted RBP16.89■□□□□ 0.29
VAMP1-208ENST00000544432 FASTKD5Q7L8L6 764 aaKnown RBP16.89■□□□□ 0.29
VAMP1-208ENST00000544432 MIGA1Q8NAN2 632 aa16.89■□□□□ 0.29
VAMP1-208ENST00000544432 DNAJC2Q99543 621 aaKnown RBP16.89■□□□□ 0.29
VAMP1-208ENST00000544432 RIOK1Q9BRS2 568 aaKnown RBP16.89■□□□□ 0.29
VAMP1-208ENST00000544432 A0A0G2JLL6 359 aaPredicted RBP16.88■□□□□ 0.29
VAMP1-208ENST00000544432 SMARCA5O60264 1052 aaPredicted RBP16.88■□□□□ 0.29
VAMP1-208ENST00000544432 CAP2P40123 477 aa16.88■□□□□ 0.29
VAMP1-208ENST00000544432 PRRT2Q7Z6L0 340 aaPredicted RBP16.88■□□□□ 0.29
VAMP1-208ENST00000544432 BOLA2Q9H3K6 86 aa16.88■□□□□ 0.29
VAMP1-208ENST00000544432 GINM1Q9NU53 330 aa16.88■□□□□ 0.29
VAMP1-208ENST00000544432 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
VAMP1-208ENST00000544432 MAGEB6P1A0A0J9YX57 407 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 TCRBV5S4A2TA0A5A2 114 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 HLA-DOAP06340 250 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 USP5P45974 858 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 AAMPQ13685 434 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 ARHGEF6Q15052 776 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 GPAT2Q6NUI2 795 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 ECHDC1Q9NTX5 307 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 PALD1Q9ULE6 856 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 SLC45A1Q9Y2W3 748 aa16.87■□□□□ 0.29
VAMP1-208ENST00000544432 FAM196BA6NMK8 535 aa16.86■□□□□ 0.29
VAMP1-208ENST00000544432 PDHXO00330 501 aa16.86■□□□□ 0.29
VAMP1-208ENST00000544432 RGS19P49795 217 aa16.86■□□□□ 0.29
VAMP1-208ENST00000544432 RRP1BQ14684 758 aaKnown RBP16.86■□□□□ 0.29
VAMP1-208ENST00000544432 OTOP1Q7RTM1 612 aa16.86■□□□□ 0.29
VAMP1-208ENST00000544432 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.86■□□□□ 0.29
VAMP1-208ENST00000544432 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
VAMP1-208ENST00000544432 ZNF532Q9HCE3 1301 aa16.86■□□□□ 0.29
VAMP1-208ENST00000544432 FOCADQ5VW36 1801 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 ASNSP08243 561 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 C17orf99Q6UX52 265 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 TTC6Q86TZ1 520 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 CRACR2BQ8N4Y2 399 aaPredicted RBP16.85■□□□□ 0.29
VAMP1-208ENST00000544432 CD99L2Q8TCZ2 262 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 EDC3Q96F86 508 aaKnown RBP16.85■□□□□ 0.29
VAMP1-208ENST00000544432 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 CRNKL1Q9BZJ0 848 aaKnown RBP16.85■□□□□ 0.29
VAMP1-208ENST00000544432 BCL11AQ9H165 835 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 EHD4Q9H223 541 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 DNAJC18Q9H819 358 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 EFCC1Q9HA90 598 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 SAP30BPQ9UHR5 308 aaKnown RBP16.85■□□□□ 0.29
VAMP1-208ENST00000544432 TRIM17Q9Y577 477 aa16.85■□□□□ 0.29
VAMP1-208ENST00000544432 USP17L5A8MUK1 530 aa16.84■□□□□ 0.29
VAMP1-208ENST00000544432 ADD2P35612 726 aa16.84■□□□□ 0.29
VAMP1-208ENST00000544432 UBE3CQ15386 1083 aa16.84■□□□□ 0.29
VAMP1-208ENST00000544432 ZNF280CQ8ND82 737 aa16.84■□□□□ 0.29
VAMP1-208ENST00000544432 GPATCH3Q96I76 525 aa16.84■□□□□ 0.29
VAMP1-208ENST00000544432 PARK7Q99497 189 aaKnown RBP16.84■□□□□ 0.29
VAMP1-208ENST00000544432 WDR18Q9BV38 432 aa16.84■□□□□ 0.29
VAMP1-208ENST00000544432 TRIM34Q9BYJ4 488 aa16.84■□□□□ 0.29
VAMP1-208ENST00000544432 DOCK1Q14185 1865 aa16.84■□□□□ 0.29
VAMP1-208ENST00000544432 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
VAMP1-208ENST00000544432 ZSCAN25Q6NSZ9 544 aa16.83■□□□□ 0.28
VAMP1-208ENST00000544432 PROCA1Q8NCQ7 364 aaPredicted RBP16.83■□□□□ 0.28
VAMP1-208ENST00000544432 ADGRA2Q96PE1 1338 aa16.83■□□□□ 0.28
VAMP1-208ENST00000544432 AS3MTQ9HBK9 375 aa16.83■□□□□ 0.28
VAMP1-208ENST00000544432 SERPINB13Q9UIV8 391 aa16.83■□□□□ 0.28
VAMP1-208ENST00000544432 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.28
VAMP1-208ENST00000544432 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 GNRH1P01148 92 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 SPP2Q13103 211 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
VAMP1-208ENST00000544432 KIF22Q14807 665 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 SH3D19Q5HYK7 790 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 TATDN1Q6P1N9 297 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.82■□□□□ 0.28
VAMP1-208ENST00000544432 AGTPBP1Q9UPW5 1226 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 PTPN22Q9Y2R2 807 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 SIPA1L1O43166 1804 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 PHIPQ8WWQ0 1821 aa16.82■□□□□ 0.28
VAMP1-208ENST00000544432 LACTBP83111 547 aaPredicted RBP16.81■□□□□ 0.28
VAMP1-208ENST00000544432 CAP1Q01518 475 aa16.81■□□□□ 0.28
VAMP1-208ENST00000544432 GADL1Q6ZQY3 521 aa16.81■□□□□ 0.28
VAMP1-208ENST00000544432 CCDC84Q86UT8 332 aaPredicted RBP16.81■□□□□ 0.28
VAMP1-208ENST00000544432 ATP8A2Q9NTI2 1148 aa16.81■□□□□ 0.28
VAMP1-208ENST00000544432 HTTP42858 3142 aa16.81■□□□□ 0.28
VAMP1-208ENST00000544432 TTC41PQ6P2S7 1318 aa16.8■□□□□ 0.28
VAMP1-208ENST00000544432 BCRP11274 1271 aa16.8■□□□□ 0.28
VAMP1-208ENST00000544432 JAG1P78504 1218 aa16.8■□□□□ 0.28
VAMP1-208ENST00000544432 LCORLQ8N3X6 602 aa16.8■□□□□ 0.28
VAMP1-208ENST00000544432 KBTBD3Q8NAB2 608 aa16.8■□□□□ 0.28
VAMP1-208ENST00000544432 GCC1Q96CN9 775 aa16.8■□□□□ 0.28
VAMP1-208ENST00000544432 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
VAMP1-208ENST00000544432 CPA4Q9UI42 421 aa16.8■□□□□ 0.28
VAMP1-208ENST00000544432 ZBTB21Q9ULJ3 1066 aa16.8■□□□□ 0.28
VAMP1-208ENST00000544432 C19orf81C9J6K1 198 aa16.79■□□□□ 0.28
VAMP1-208ENST00000544432 ERC2O15083 957 aa16.79■□□□□ 0.28
VAMP1-208ENST00000544432 MBD4O95243 580 aa16.79■□□□□ 0.28
VAMP1-208ENST00000544432 POLR3DP05423 398 aaPredicted RBP16.79■□□□□ 0.28
VAMP1-208ENST00000544432 PLCD1P51178 756 aa16.79■□□□□ 0.28
VAMP1-208ENST00000544432 PRMT2P55345 433 aa16.79■□□□□ 0.28
VAMP1-208ENST00000544432 BACE1P56817 501 aa16.79■□□□□ 0.28
VAMP1-208ENST00000544432 GABPAQ06546 454 aa16.79■□□□□ 0.28
VAMP1-208ENST00000544432 PABPC4Q13310 644 aaKnown RBP eCLIP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms