RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 PLCG2P16885 1265 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 MUM1L1Q5H9M0 696 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 CNNM4Q6P4Q7 775 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 C16orf71Q8IYS4 520 aaPredicted RBP11.55□□□□□ -0.56
PCDH9-204ENST00000544246 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 ELP1O95163 1332 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 SBNO2Q9Y2G9 1366 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 GOLGA6BA6NDN3 693 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 ZBTB24O43167 697 aaPredicted RBP11.55□□□□□ -0.56
PCDH9-204ENST00000544246 PLCD1P51178 756 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 CCDC93Q567U6 631 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 SMAP1Q8IYB5 467 aaPredicted RBP11.55□□□□□ -0.56
PCDH9-204ENST00000544246 RHPN1Q8TCX5 695 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 ARHGAP42A6NI28 874 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 TRIM27P14373 513 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 HS1BP3Q53T59 392 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 P3H4Q92791 437 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 SDCCAG3Q96C92 435 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 USTQ9Y2C2 406 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 ATP6V1E1P36543 226 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 MYL5Q02045 173 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 C20orf194Q5TEA3 1177 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 SYCE1Q8N0S2 351 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 MAIP1Q8WWC4 291 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 VPS37BQ9H9H4 285 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 STK38LQ9Y2H1 464 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 RNF40O75150 1001 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 PAK2Q13177 524 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 PDCD2Q16342 344 aaPredicted RBP11.55□□□□□ -0.56
PCDH9-204ENST00000544246 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 IGSF22Q8N9C0 903 aa11.55□□□□□ -0.56
PCDH9-204ENST00000544246 BIN2Q9UBW5 565 aaPredicted RBP11.55□□□□□ -0.56
PCDH9-204ENST00000544246 LPXNO60711 386 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 TBC1D8O95759 1140 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 PLCB4Q15147 1175 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 PDZD8Q8NEN9 1154 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 BAG5Q9UL15 447 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 ITSN2Q9NZM3 1697 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 IGSF3O75054 1194 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
PCDH9-204ENST00000544246 PHEXP78562 749 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 NXNQ6DKJ4 435 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 PARP2Q9UGN5 583 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 PPFIA4O75335 1185 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 SLC9C2Q5TAH2 1124 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 TRIM56Q9BRZ2 755 aaKnown RBP11.54□□□□□ -0.56
PCDH9-204ENST00000544246 PKD2L1Q9P0L9 805 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 CTTNBP2NLQ9P2B4 639 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 KIF11P52732 1056 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 PDE4DQ08499 809 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 DENND2CQ68D51 928 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 ESYT1Q9BSJ8 1104 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 NUP58Q9BVL2 599 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 SNRPA1P09661 255 aaKnown RBP11.54□□□□□ -0.56
PCDH9-204ENST00000544246 TBC1D8BQ0IIM8 1120 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 DCUN1D2Q6PH85 259 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 ZMAT2Q96NC0 199 aaKnown RBP11.54□□□□□ -0.56
PCDH9-204ENST00000544246 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
PCDH9-204ENST00000544246 DISP3Q9P2K9 1392 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 NBPF14Q5TI25 921 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 JADE1Q6IE81 842 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.53□□□□□ -0.56
PCDH9-204ENST00000544246 SETDB2Q96T68 719 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 RIOK1Q9BRS2 568 aaKnown RBP11.53□□□□□ -0.56
PCDH9-204ENST00000544246 RABEP2Q9H5N1 569 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 BAIAP2L1Q9UHR4 511 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 KLHL7Q8IXQ5 586 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 TCEANC2Q96MN5 208 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 RIMS2Q9UQ26 1411 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 CEP104O60308 925 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 SDSP20132 328 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 GCKP35557 465 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
PCDH9-204ENST00000544246 SKAP1Q86WV1 359 aa11.53□□□□□ -0.56
PCDH9-204ENST00000544246 JARID2Q92833 1246 aaPredicted RBP11.53□□□□□ -0.56
PCDH9-204ENST00000544246 IQSEC3Q9UPP2 1182 aaPredicted RBP11.53□□□□□ -0.56
PCDH9-204ENST00000544246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
PCDH9-204ENST00000544246 ABCC5O15440 1437 aa11.52□□□□□ -0.56
PCDH9-204ENST00000544246 PI4KAP2A4QPH2 592 aa11.52□□□□□ -0.56
PCDH9-204ENST00000544246 ECM2O94769 699 aaPredicted RBP11.52□□□□□ -0.56
PCDH9-204ENST00000544246 PRIM1P49642 420 aaKnown RBP11.52□□□□□ -0.56
PCDH9-204ENST00000544246 NUCB1Q02818 461 aa11.52□□□□□ -0.56
PCDH9-204ENST00000544246 BRDTQ58F21 947 aaPredicted RBP11.52□□□□□ -0.56
PCDH9-204ENST00000544246 TRIM68Q6AZZ1 485 aa11.52□□□□□ -0.56
PCDH9-204ENST00000544246 PI4KAP1Q8N8J0 262 aa11.52□□□□□ -0.56
PCDH9-204ENST00000544246 EIF2AQ9BY44 585 aaKnown RBP11.52□□□□□ -0.56
PCDH9-204ENST00000544246 MRPL46Q9H2W6 279 aaKnown RBP11.52□□□□□ -0.56
PCDH9-204ENST00000544246 PAG1Q9NWQ8 432 aa11.52□□□□□ -0.56
PCDH9-204ENST00000544246 MCM9Q9NXL9 1143 aa11.52□□□□□ -0.56
PCDH9-204ENST00000544246 THEGQ9P2T0 379 aa11.52□□□□□ -0.56
PCDH9-204ENST00000544246 TTLL3Q9Y4R7 772 aa11.52□□□□□ -0.56
PCDH9-204ENST00000544246 VWA3AA6NCI4 1184 aa11.52□□□□□ -0.57
PCDH9-204ENST00000544246 STX2P32856 288 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms