RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 XAGE2Q96GT9 111 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 EYA1Q99502 592 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 SELENOOQ9BVL4 669 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 ODF2LQ9ULJ1 636 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 SAR1BQ9Y6B6 198 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 PEAK1Q9H792 1746 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 E7EWF7 191 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 GRM8O00222 908 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 CDKL5O76039 1030 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 EPB41P11171 864 aaKnown RBP11.69□□□□□ -0.54
TCF4-209ENST00000544241 MARCKSP29966 332 aaPredicted RBP11.69□□□□□ -0.54
TCF4-209ENST00000544241 SKOR1P84550 965 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 RBL2Q08999 1139 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 SHC4Q6S5L8 630 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 KSR2Q6VAB6 950 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 STOX1Q6ZVD7 989 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 ANKRD18AQ8IVF6 992 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 N4BP2L2Q92802 583 aaPredicted RBP11.69□□□□□ -0.54
TCF4-209ENST00000544241 SH3GL2Q99962 352 aa11.69□□□□□ -0.54
TCF4-209ENST00000544241 MED1Q15648 1581 aaPredicted RBP11.68□□□□□ -0.54
TCF4-209ENST00000544241 UTYO14607 1347 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 MRC1P22897 1456 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 PSMD14O00487 310 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 DDX58O95786 925 aaKnown RBP11.68□□□□□ -0.54
TCF4-209ENST00000544241 EZRP15311 586 aaKnown RBP11.68□□□□□ -0.54
TCF4-209ENST00000544241 PLCD1P51178 756 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 POSTNQ15063 836 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 ALS2CLQ60I27 953 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 TRAPPC11Q7Z392 1133 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 UBE3BQ7Z3V4 1068 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 LINS1Q8NG48 757 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 ZKSCAN4Q969J2 545 aaPredicted RBP11.68□□□□□ -0.54
TCF4-209ENST00000544241 HAUS4Q9H6D7 363 aa11.68□□□□□ -0.54
TCF4-209ENST00000544241 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
TCF4-209ENST00000544241 PIP4K2AP48426 406 aaPredicted RBP11.67□□□□□ -0.54
TCF4-209ENST00000544241 FNTAP49354 379 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 ZKSCAN8Q15776 578 aaPredicted RBP11.67□□□□□ -0.54
TCF4-209ENST00000544241 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 LONRF3Q496Y0 759 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 WLSQ5T9L3 541 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
TCF4-209ENST00000544241 CCNI2Q6ZMN8 369 aaPredicted RBP11.67□□□□□ -0.54
TCF4-209ENST00000544241 IQCA1Q86XH1 822 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 MAGEC3Q8TD91 643 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
TCF4-209ENST00000544241 KLC4Q9NSK0 619 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
TCF4-209ENST00000544241 MAN1B1Q9UKM7 699 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 ZNF609O15014 1411 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 COL15A1P39059 1388 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 SLIT1O75093 1534 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 FMN2Q9NZ56 1722 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 PATL2C9JE40 543 aaKnown RBP11.67□□□□□ -0.54
TCF4-209ENST00000544241 EIF4A1P60842 406 aaKnown RBP11.67□□□□□ -0.54
TCF4-209ENST00000544241 APBA1Q02410 837 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 PPP2R5AQ15172 486 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 TTC39AQ5SRH9 613 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 KBTBD3Q8NAB2 608 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 HAUS7Q99871 368 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 TRIM6Q9C030 488 aaPredicted RBP11.67□□□□□ -0.54
TCF4-209ENST00000544241 MAP3K2Q9Y2U5 619 aa11.67□□□□□ -0.54
TCF4-209ENST00000544241 GRIN2DO15399 1336 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 SRRM3A6NNA2 597 aaPredicted RBP11.66□□□□□ -0.54
TCF4-209ENST00000544241 GOLIM4O00461 696 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 SLC8A1P32418 973 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 PDE4BQ07343 736 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 MORC3Q14149 939 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 PTPN21Q16825 1174 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 SPATA1Q5VX52 437 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 NCAPH2Q6IBW4 605 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 PLPPR3Q6T4P5 718 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 KRI1Q8N9T8 703 aaKnown RBP11.66□□□□□ -0.54
TCF4-209ENST00000544241 ACTR5Q9H9F9 607 aaPredicted RBP11.66□□□□□ -0.54
TCF4-209ENST00000544241 IQSEC3Q9UPP2 1182 aaPredicted RBP11.66□□□□□ -0.54
TCF4-209ENST00000544241 USP6P35125 1406 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 AGPSO00116 658 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 CLSTN1O94985 981 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 IFFO1Q0D2I5 559 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 TRIM29Q14134 588 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 CCDC40Q4G0X9 1142 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 HSP90AA4PQ58FG1 418 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 CAGE1Q8TC20 777 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 TEX13AQ9BXU3 409 aaPredicted RBP11.66□□□□□ -0.54
TCF4-209ENST00000544241 VCPKMTQ9H867 229 aa11.66□□□□□ -0.54
TCF4-209ENST00000544241 WDR17Q8IZU2 1322 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 OVOS2A0A0G2JMS6 1433 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 GOLGA8BA8MQT2 603 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 HSF2BPO75031 334 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 BMP6P22004 513 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 CASP14P31944 242 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 PBX1P40424 430 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 SARSP49591 514 aaKnown RBP11.65□□□□□ -0.54
TCF4-209ENST00000544241 MDM2Q00987 491 aaPredicted RBP11.65□□□□□ -0.54
TCF4-209ENST00000544241 PTPAQ15257 358 aa11.65□□□□□ -0.54
TCF4-209ENST00000544241 PAPD7Q5XG87 772 aaKnown RBP11.65□□□□□ -0.54
TCF4-209ENST00000544241 TAX1BP1Q86VP1 789 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms