RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 USP17L1Q7RTZ2 530 aa15.99■□□□□ 0.15
HCFC2-202ENST00000544223 KIAA0825Q8IV33 1275 aa15.99■□□□□ 0.15
HCFC2-202ENST00000544223 TEX11Q8IYF3 940 aa15.99■□□□□ 0.15
HCFC2-202ENST00000544223 ZSCAN10Q96SZ4 725 aaPredicted RBP15.99■□□□□ 0.15
HCFC2-202ENST00000544223 ANAPC4Q9UJX5 808 aa15.99■□□□□ 0.15
HCFC2-202ENST00000544223 TTF2Q9UNY4 1162 aaKnown RBP15.99■□□□□ 0.15
HCFC2-202ENST00000544223 HMGN5P82970 282 aaKnown RBP15.98■□□□□ 0.15
HCFC2-202ENST00000544223 C8orf76Q96K31 380 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 RNF41Q9H4P4 317 aaPredicted RBP15.98■□□□□ 0.15
HCFC2-202ENST00000544223 DAGLAQ9Y4D2 1042 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 ATP6V1DQ9Y5K8 247 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 SCN9AQ15858 1988 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 MAST2Q6P0Q8 1798 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 CDK5RAP2Q96SN8 1893 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 ERICH2A1L162 156 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 FSD2A1L4K1 749 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 SEC23AQ15436 765 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 SGMS1Q86VZ5 419 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 ZNF654Q8IZM8 581 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 ATP8A2Q9NTI2 1148 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 WDR19Q8NEZ3 1342 aa15.98■□□□□ 0.15
HCFC2-202ENST00000544223 KIAA1551Q9HCM1 1747 aa15.97■□□□□ 0.15
HCFC2-202ENST00000544223 LIFRP42702 1097 aa15.97■□□□□ 0.15
HCFC2-202ENST00000544223 RHBDL3P58872 404 aa15.97■□□□□ 0.15
HCFC2-202ENST00000544223 KRT85P78386 507 aa15.97■□□□□ 0.15
HCFC2-202ENST00000544223 SPATA32Q96LK8 384 aa15.97■□□□□ 0.15
HCFC2-202ENST00000544223 LEO1Q8WVC0 666 aaPredicted RBP15.97■□□□□ 0.15
HCFC2-202ENST00000544223 USP28Q96RU2 1077 aa15.97■□□□□ 0.15
HCFC2-202ENST00000544223 ALG1Q9BT22 464 aa15.97■□□□□ 0.15
HCFC2-202ENST00000544223 TMX4Q9H1E5 349 aaPredicted RBP15.97■□□□□ 0.15
HCFC2-202ENST00000544223 TSPY2A6NKD2 308 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 PLEKHA8P1O95397 391 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 BAG3O95817 575 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 LIG1P18858 919 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 TFAP4Q01664 338 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 SART3Q15020 963 aaKnown RBP15.96■□□□□ 0.15
HCFC2-202ENST00000544223 IFIT1BQ5T764 474 aaKnown RBP15.96■□□□□ 0.15
HCFC2-202ENST00000544223 C12orf60Q5U649 245 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 COA1Q9GZY4 146 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 KCNJ14Q9UNX9 436 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.96■□□□□ 0.15
HCFC2-202ENST00000544223 ECM29Q5VYK3 1845 aa15.96■□□□□ 0.15
HCFC2-202ENST00000544223 PTMSP20962 102 aa15.96■□□□□ 0.14
HCFC2-202ENST00000544223 CAMK4Q16566 473 aa15.96■□□□□ 0.14
HCFC2-202ENST00000544223 PGBD1Q96JS3 809 aa15.96■□□□□ 0.14
HCFC2-202ENST00000544223 NOL10Q9BSC4 688 aaKnown RBP15.96■□□□□ 0.14
HCFC2-202ENST00000544223 DDX4Q9NQI0 724 aaKnown RBP15.96■□□□□ 0.14
HCFC2-202ENST00000544223 IL17RBQ9NRM6 502 aa15.96■□□□□ 0.14
HCFC2-202ENST00000544223 FLT1P17948 1338 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 GPR75-ASB3A0A0A6YYF3 556 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 DHX16O60231 1041 aaKnown RBP15.95■□□□□ 0.14
HCFC2-202ENST00000544223 IARSP41252 1262 aaKnown RBP15.95■□□□□ 0.14
HCFC2-202ENST00000544223 GSTO1P78417 241 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 RTN1Q16799 776 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 RNF214Q8ND24 703 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 ECE2O60344 883 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 VEGFAP15692 232 aaPredicted RBP15.95■□□□□ 0.14
HCFC2-202ENST00000544223 SYNE3Q6ZMZ3 975 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 CLEC10AQ8IUN9 316 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 FANCBQ8NB91 859 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 FBXO18Q8NFZ0 1043 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 GRPEL1Q9HAV7 217 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 MKNK2Q9HBH9 465 aa15.95■□□□□ 0.14
HCFC2-202ENST00000544223 ARPP21Q9UBL0 812 aaPredicted RBP15.95■□□□□ 0.14
HCFC2-202ENST00000544223 DPEP1P16444 411 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 UBE2HP62256 183 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 NFIAQ12857 509 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 ZFPM1Q8IX07 1006 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 TMEM87AQ8NBN3 555 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 C7orf43Q8WVR3 580 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 SHISA4Q96DD7 197 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 LAMB1P07942 1786 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 GIMAP6Q6P9H5 292 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 TMC4Q7Z404 712 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 CLIC4Q9Y696 253 aa15.94■□□□□ 0.14
HCFC2-202ENST00000544223 RGPD3A6NKT7 1758 aaPredicted RBP15.93■□□□□ 0.14
HCFC2-202ENST00000544223 RGPD4Q7Z3J3 1758 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 FAM205AQ6ZU69 1335 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 FAM196BA6NMK8 535 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 RBM5P52756 815 aaKnown RBP eCLIP15.93■□□□□ 0.14
HCFC2-202ENST00000544223 PPP4CP60510 307 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 TCP10Q12799 353 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 KRT40Q6A162 431 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 NBPF11Q86T75 865 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 IQCA1Q86XH1 822 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 RBSNQ9H1K0 784 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 CPVLQ9H3G5 476 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 MBD3O95983 291 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 LDHCP07864 332 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 FGRP09769 529 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 STYK1Q6J9G0 422 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 RCSD1Q6JBY9 416 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 ZNF277Q9NRM2 450 aaPredicted RBP15.93■□□□□ 0.14
HCFC2-202ENST00000544223 NAV1Q8NEY1 1877 aa15.93■□□□□ 0.14
HCFC2-202ENST00000544223 EIF6P56537 245 aaKnown RBP15.92■□□□□ 0.14
HCFC2-202ENST00000544223 PDE4BQ07343 736 aa15.92■□□□□ 0.14
HCFC2-202ENST00000544223 SSRP1Q08945 709 aaKnown RBP15.92■□□□□ 0.14
HCFC2-202ENST00000544223 SHROOM1Q2M3G4 852 aaPredicted RBP15.92■□□□□ 0.14
HCFC2-202ENST00000544223 YDJCA8MPS7 323 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms