RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 PCDHB15Q9Y5E8 787 aa28.2■■■□□ 2.1
CHFR-222ENST00000544093 PDE6AP16499 860 aa28.19■■■□□ 2.1
CHFR-222ENST00000544093 USP5P45974 858 aa28.19■■■□□ 2.1
CHFR-222ENST00000544093 DYNLL1P63167 89 aaKnown RBP28.19■■■□□ 2.1
CHFR-222ENST00000544093 ERO1AQ96HE7 468 aa28.19■■■□□ 2.1
CHFR-222ENST00000544093 TRIM34Q9BYJ4 488 aa28.19■■■□□ 2.1
CHFR-222ENST00000544093 TBC1D2Q9BYX2 928 aa28.19■■■□□ 2.1
CHFR-222ENST00000544093 ECHDC1Q9NTX5 307 aa28.19■■■□□ 2.1
CHFR-222ENST00000544093 ZHX2Q9Y6X8 837 aa28.19■■■□□ 2.1
CHFR-222ENST00000544093 MYH1P12882 1939 aa28.18■■■□□ 2.1
CHFR-222ENST00000544093 MAGEB6P1A0A0J9YX57 407 aa28.18■■■□□ 2.1
CHFR-222ENST00000544093 BTBD19C9JJ37 291 aa28.18■■■□□ 2.1
CHFR-222ENST00000544093 SMARCA5O60264 1052 aaPredicted RBP28.18■■■□□ 2.1
CHFR-222ENST00000544093 ANKRD23Q86SG2 305 aa28.18■■■□□ 2.1
CHFR-222ENST00000544093 CRBNQ96SW2 442 aa28.18■■■□□ 2.1
CHFR-222ENST00000544093 FASTKD5Q7L8L6 764 aaKnown RBP28.17■■■□□ 2.1
CHFR-222ENST00000544093 METTL16Q86W50 562 aaKnown RBP28.17■■■□□ 2.1
CHFR-222ENST00000544093 CRACR2BQ8N4Y2 399 aaPredicted RBP28.17■■■□□ 2.1
CHFR-222ENST00000544093 AFG3L2Q9Y4W6 797 aa28.17■■■□□ 2.1
CHFR-222ENST00000544093 ATAD5Q96QE3 1844 aa28.17■■■□□ 2.1
CHFR-222ENST00000544093 SIPA1L1O43166 1804 aa28.16■■■□□ 2.1
CHFR-222ENST00000544093 SP3Q02447 781 aa28.16■■■□□ 2.1
CHFR-222ENST00000544093 RIOK1Q9BRS2 568 aaKnown RBP28.16■■■□□ 2.1
CHFR-222ENST00000544093 GINM1Q9NU53 330 aa28.16■■■□□ 2.1
CHFR-222ENST00000544093 MYH7P12883 1935 aa28.16■■■□□ 2.1
CHFR-222ENST00000544093 ZNF532Q9HCE3 1301 aa28.16■■■□□ 2.1
CHFR-222ENST00000544093 PHIPQ8WWQ0 1821 aa28.15■■■□□ 2.1
CHFR-222ENST00000544093 CAP2P40123 477 aa28.15■■■□□ 2.1
CHFR-222ENST00000544093 ARHGEF6Q15052 776 aa28.15■■■□□ 2.1
CHFR-222ENST00000544093 ZSCAN25Q6NSZ9 544 aa28.15■■■□□ 2.1
CHFR-222ENST00000544093 PALD1Q9ULE6 856 aa28.15■■■□□ 2.1
CHFR-222ENST00000544093 A0A0G2JLL6 359 aaPredicted RBP28.14■■■□□ 2.1
CHFR-222ENST00000544093 FAM196BA6NMK8 535 aa28.14■■■□□ 2.1
CHFR-222ENST00000544093 TLR2O60603 784 aa28.14■■■□□ 2.1
CHFR-222ENST00000544093 PRRT2Q7Z6L0 340 aaPredicted RBP28.14■■■□□ 2.1
CHFR-222ENST00000544093 TTC6Q86TZ1 520 aa28.14■■■□□ 2.1
CHFR-222ENST00000544093 CRNKL1Q9BZJ0 848 aaKnown RBP28.14■■■□□ 2.1
CHFR-222ENST00000544093 PTPRFP10586 1907 aa28.14■■■□□ 2.09
CHFR-222ENST00000544093 TCRBV5S4A2TA0A5A2 114 aa28.13■■■□□ 2.09
CHFR-222ENST00000544093 CCDC85CA6NKD9 419 aa28.13■■■□□ 2.09
CHFR-222ENST00000544093 SLURP2P0DP57 97 aa28.13■■■□□ 2.09
CHFR-222ENST00000544093 PDHXO00330 501 aa28.12■■■□□ 2.09
CHFR-222ENST00000544093 ASNSP08243 561 aa28.12■■■□□ 2.09
CHFR-222ENST00000544093 ADD2P35612 726 aa28.12■■■□□ 2.09
CHFR-222ENST00000544093 FBXO46Q6PJ61 603 aaPredicted RBP28.12■■■□□ 2.09
CHFR-222ENST00000544093 EDC3Q96F86 508 aaKnown RBP28.12■■■□□ 2.09
CHFR-222ENST00000544093 EHD4Q9H223 541 aa28.12■■■□□ 2.09
CHFR-222ENST00000544093 AS3MTQ9HBK9 375 aa28.12■■■□□ 2.09
CHFR-222ENST00000544093 ZBTB47Q9UFB7 747 aaPredicted RBP28.12■■■□□ 2.09
CHFR-222ENST00000544093 SAP30BPQ9UHR5 308 aaKnown RBP28.12■■■□□ 2.09
CHFR-222ENST00000544093 SLC45A1Q9Y2W3 748 aa28.12■■■□□ 2.09
CHFR-222ENST00000544093 MOGSQ13724 837 aa28.11■■■□□ 2.09
CHFR-222ENST00000544093 UBE3CQ15386 1083 aa28.11■■■□□ 2.09
CHFR-222ENST00000544093 PARK7Q99497 189 aaKnown RBP28.11■■■□□ 2.09
CHFR-222ENST00000544093 TTC41PQ6P2S7 1318 aa28.11■■■□□ 2.09
CHFR-222ENST00000544093 NAV1Q8NEY1 1877 aa28.1■■■□□ 2.09
CHFR-222ENST00000544093 USP17L5A8MUK1 530 aa28.1■■■□□ 2.09
CHFR-222ENST00000544093 HDAC1Q13547 482 aaPredicted RBP28.1■■■□□ 2.09
CHFR-222ENST00000544093 GCC1Q96CN9 775 aa28.1■■■□□ 2.09
CHFR-222ENST00000544093 SERPINB13Q9UIV8 391 aa28.1■■■□□ 2.09
CHFR-222ENST00000544093 TRIM75PA6NK02 468 aa28.09■■■□□ 2.09
CHFR-222ENST00000544093 ZNF280CQ8ND82 737 aa28.09■■■□□ 2.09
CHFR-222ENST00000544093 TAOK2Q9UL54 1235 aa28.09■■■□□ 2.09
CHFR-222ENST00000544093 TRIM17Q9Y577 477 aa28.09■■■□□ 2.09
CHFR-222ENST00000544093 DDX60LQ5H9U9 1706 aaKnown RBP28.09■■■□□ 2.09
CHFR-222ENST00000544093 ERC2O15083 957 aa28.08■■■□□ 2.09
CHFR-222ENST00000544093 KIF22Q14807 665 aa28.08■■■□□ 2.09
CHFR-222ENST00000544093 OTOP1Q7RTM1 612 aa28.08■■■□□ 2.09
CHFR-222ENST00000544093 CD99L2Q8TCZ2 262 aa28.08■■■□□ 2.09
CHFR-222ENST00000544093 DNAJC18Q9H819 358 aa28.08■■■□□ 2.09
CHFR-222ENST00000544093 EFCC1Q9HA90 598 aa28.08■■■□□ 2.09
CHFR-222ENST00000544093 GPAT2Q6NUI2 795 aa28.07■■■□□ 2.08
CHFR-222ENST00000544093 GADL1Q6ZQY3 521 aa28.07■■■□□ 2.08
CHFR-222ENST00000544093 PROCA1Q8NCQ7 364 aaPredicted RBP28.07■■■□□ 2.08
CHFR-222ENST00000544093 HPS5Q9UPZ3 1129 aa28.07■■■□□ 2.08
CHFR-222ENST00000544093 POLR3DP05423 398 aaPredicted RBP28.06■■■□□ 2.08
CHFR-222ENST00000544093 LRRFIP1Q32MZ4 808 aaKnown RBP28.06■■■□□ 2.08
CHFR-222ENST00000544093 WDR18Q9BV38 432 aa28.06■■■□□ 2.08
CHFR-222ENST00000544093 ATP8A2Q9NTI2 1148 aa28.06■■■□□ 2.08
CHFR-222ENST00000544093 GNRH1P01148 92 aa28.05■■■□□ 2.08
CHFR-222ENST00000544093 SPP2Q13103 211 aa28.05■■■□□ 2.08
CHFR-222ENST00000544093 RRP1BQ14684 758 aaKnown RBP28.05■■■□□ 2.08
CHFR-222ENST00000544093 TATDN1Q6P1N9 297 aa28.05■■■□□ 2.08
CHFR-222ENST00000544093 C17orf99Q6UX52 265 aa28.05■■■□□ 2.08
CHFR-222ENST00000544093 LCORLQ8N3X6 602 aa28.05■■■□□ 2.08
CHFR-222ENST00000544093 KBTBD3Q8NAB2 608 aa28.05■■■□□ 2.08
CHFR-222ENST00000544093 AGTPBP1Q9UPW5 1226 aa28.05■■■□□ 2.08
CHFR-222ENST00000544093 LOC285556D6RIA3 1793 aa28.04■■■□□ 2.08
CHFR-222ENST00000544093 GLRX3O76003 335 aaKnown RBP28.04■■■□□ 2.08
CHFR-222ENST00000544093 MBD4O95243 580 aa28.04■■■□□ 2.08
CHFR-222ENST00000544093 DDRGK1Q96HY6 314 aa28.04■■■□□ 2.08
CHFR-222ENST00000544093 DCP1AQ9NPI6 582 aaPredicted RBP28.04■■■□□ 2.08
CHFR-222ENST00000544093 MCM9Q9NXL9 1143 aa28.04■■■□□ 2.08
CHFR-222ENST00000544093 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.04■■■□□ 2.08
CHFR-222ENST00000544093 PNMA3Q9UL41 463 aa28.04■■■□□ 2.08
CHFR-222ENST00000544093 ADGRA2Q96PE1 1338 aa28.03■■■□□ 2.08
CHFR-222ENST00000544093 ZFYP08048 801 aaPredicted RBP28.03■■■□□ 2.08
CHFR-222ENST00000544093 LACTBP83111 547 aaPredicted RBP28.03■■■□□ 2.08
CHFR-222ENST00000544093 PABPC4Q13310 644 aaKnown RBP eCLIP28.03■■■□□ 2.08
CHFR-222ENST00000544093 ARMT1Q9H993 441 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms