RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 WDR18Q9BV38 432 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 PRDM6Q9NQX0 595 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 REV1Q9UBZ9 1251 aa5.51□□□□□ -1.53
SCFD1-207ENST00000544052 PRR36Q9H6K5 1346 aa5.5□□□□□ -1.53
SCFD1-207ENST00000544052 IMPDH2P12268 514 aa5.5□□□□□ -1.53
SCFD1-207ENST00000544052 DDR2Q16832 855 aa5.5□□□□□ -1.53
SCFD1-207ENST00000544052 UBASH3BQ8TF42 649 aa5.5□□□□□ -1.53
SCFD1-207ENST00000544052 PCDHGC5Q9Y5F6 944 aa5.5□□□□□ -1.53
SCFD1-207ENST00000544052 SNCAIPQ9Y6H5 919 aa5.5□□□□□ -1.53
SCFD1-207ENST00000544052 FAM86C2PA6NEL3 165 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 AOC2O75106 756 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 PLCG1P19174 1290 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 COL8A1P27658 744 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 DGKGP49619 791 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 TCEAL1Q15170 157 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 ZYXQ15942 572 aaKnown RBP5.49□□□□□ -1.53
SCFD1-207ENST00000544052 KIF4BQ2VIQ3 1234 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 ZC3H12AQ5D1E8 599 aaKnown RBP5.49□□□□□ -1.53
SCFD1-207ENST00000544052 TRAPPC3LQ5T215 181 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 CYFIP1Q7L576 1253 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 OR6P1Q8NGX9 317 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 KANSL2Q9H9L4 492 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 MSRB2Q9Y3D2 182 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 A0A1W2PQH9 124 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 B2RBV5 119 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 CANXP27824 592 aaKnown RBP5.49□□□□□ -1.53
SCFD1-207ENST00000544052 CASP7P55210 303 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 PPM1JQ5JR12 505 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 EGFLAMQ63HQ2 1017 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 OVOS1Q6IE37 1185 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 LINC00114Q6XXX2 140 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 TTC6Q86TZ1 520 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 MAPK8IP1Q9UQF2 711 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 HIF3AQ9Y2N7 669 aa5.49□□□□□ -1.53
SCFD1-207ENST00000544052 SBNO2Q9Y2G9 1366 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 SLC22A31A6NKX4 558 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 GNB5O14775 395 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 WISP1O95388 367 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 ACRP10323 421 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 GRK4P32298 578 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 XP32Q5T750 250 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 C6orf15Q6UXA7 325 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-207ENST00000544052 TMEM40Q8WWA1 233 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 RNPC3Q96LT9 517 aaKnown RBP5.48□□□□□ -1.53
SCFD1-207ENST00000544052 DNAJC7Q99615 494 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 RAD18Q9NS91 495 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 KLHL3Q9UH77 587 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 PPP1R9AQ9ULJ8 1098 aa5.48□□□□□ -1.53
SCFD1-207ENST00000544052 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCFD1-207ENST00000544052 CHURC1-FNTBB4DL54 471 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 DLL1O00548 723 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-207ENST00000544052 DDAH1O94760 285 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 GJB6O95452 261 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 PGRP06401 933 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 SLFN14P0C7P3 912 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 GUCY2CP25092 1073 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 RING1Q06587 406 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 AKAP4Q5JQC9 854 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 LILRB2Q8N423 598 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 ATG4CQ96DT6 458 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 ANKRD62A6NC57 917 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 MEIS3P2A8K0S8 358 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 UPK3BL1B0FP48 263 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 UPK3BL2E5RIL1 263 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 ETF1P62495 437 aaKnown RBP5.47□□□□□ -1.53
SCFD1-207ENST00000544052 FXNQ16595 210 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 DUOXA2Q1HG44 320 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 EXOSC6Q5RKV6 272 aaKnown RBP5.47□□□□□ -1.53
SCFD1-207ENST00000544052 MAP4K3Q8IVH8 894 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 ACSF2Q96CM8 615 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-207ENST00000544052 TRIM11Q96F44 468 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 TM9SF2Q99805 663 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 NOP53Q9NZM5 478 aaKnown RBP5.47□□□□□ -1.53
SCFD1-207ENST00000544052 GMIPQ9P107 970 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 PCDHB10Q9UN67 800 aa5.47□□□□□ -1.53
SCFD1-207ENST00000544052 LTBP3Q9NS15 1303 aa5.46□□□□□ -1.53
SCFD1-207ENST00000544052 A0A0A0MRY4 1105 aa5.46□□□□□ -1.53
SCFD1-207ENST00000544052 PDPK1O15530 556 aa5.46□□□□□ -1.53
SCFD1-207ENST00000544052 PDE4BQ07343 736 aa5.46□□□□□ -1.53
SCFD1-207ENST00000544052 LRRFIP1Q32MZ4 808 aaKnown RBP5.46□□□□□ -1.53
SCFD1-207ENST00000544052 ARSHQ5FYA8 562 aa5.46□□□□□ -1.53
SCFD1-207ENST00000544052 NLRC3Q7RTR2 1065 aa5.46□□□□□ -1.53
SCFD1-207ENST00000544052 SLC9A7Q96T83 725 aa5.46□□□□□ -1.53
SCFD1-207ENST00000544052 CCDC113Q9H0I3 377 aa5.46□□□□□ -1.53
SCFD1-207ENST00000544052 FAM229AH3BQW9 127 aa5.46□□□□□ -1.54
SCFD1-207ENST00000544052 TMPRSS2O15393 492 aa5.46□□□□□ -1.54
SCFD1-207ENST00000544052 DRD2P14416 443 aa5.46□□□□□ -1.54
SCFD1-207ENST00000544052 NME1P15531 152 aaKnown RBP5.46□□□□□ -1.54
SCFD1-207ENST00000544052 POLR2BP30876 1174 aaKnown RBP5.46□□□□□ -1.54
SCFD1-207ENST00000544052 NTF4P34130 210 aa5.46□□□□□ -1.54
SCFD1-207ENST00000544052 MRM1Q6IN84 353 aaKnown RBP5.46□□□□□ -1.54
SCFD1-207ENST00000544052 FMR1NBQ8N0W7 255 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-207ENST00000544052 SH3TC2Q8TF17 1288 aa5.46□□□□□ -1.54
SCFD1-207ENST00000544052 TMPRSS13Q9BYE2 586 aa5.46□□□□□ -1.54
SCFD1-207ENST00000544052 WNT10AQ9GZT5 417 aa5.46□□□□□ -1.54
SCFD1-207ENST00000544052 PICK1Q9NRD5 415 aa5.46□□□□□ -1.54
SCFD1-207ENST00000544052 FURINP09958 794 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 HSP90B1P14625 803 aaKnown RBP5.45□□□□□ -1.54
SCFD1-207ENST00000544052 ID3Q02535 119 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms