RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 KIF4BQ2VIQ3 1234 aa9.53□□□□□ -0.88
SMCO2-206ENST00000543991 LRFN4Q6PJG9 635 aa9.53□□□□□ -0.88
SMCO2-206ENST00000543991 DTWD1Q8N5C7 304 aa9.53□□□□□ -0.88
SMCO2-206ENST00000543991 DCAF11Q8TEB1 546 aa9.53□□□□□ -0.88
SMCO2-206ENST00000543991 TACC3Q9Y6A5 838 aa9.53□□□□□ -0.88
SMCO2-206ENST00000543991 GRIN2AQ12879 1464 aa9.53□□□□□ -0.88
SMCO2-206ENST00000543991 LOC100289279A0A1B0GTE1 492 aa9.52□□□□□ -0.89
SMCO2-206ENST00000543991 LRRFIP1Q32MZ4 808 aaKnown RBP9.52□□□□□ -0.89
SMCO2-206ENST00000543991 LYPD4Q6UWN0 246 aa9.52□□□□□ -0.89
SMCO2-206ENST00000543991 LSRQ86X29 649 aaPredicted RBP9.52□□□□□ -0.89
SMCO2-206ENST00000543991 WDR89Q96FK6 387 aaPredicted RBP9.52□□□□□ -0.89
SMCO2-206ENST00000543991 ACTR10Q9NZ32 417 aa9.52□□□□□ -0.89
SMCO2-206ENST00000543991 DDX3YO15523 660 aaKnown RBP9.51□□□□□ -0.89
SMCO2-206ENST00000543991 ADAM11O75078 769 aa9.51□□□□□ -0.89
SMCO2-206ENST00000543991 DEAF1O75398 565 aaPredicted RBP9.51□□□□□ -0.89
SMCO2-206ENST00000543991 CYFIP1Q7L576 1253 aa9.51□□□□□ -0.89
SMCO2-206ENST00000543991 LRP10Q7Z4F1 713 aa9.51□□□□□ -0.89
SMCO2-206ENST00000543991 ELMO3Q96BJ8 720 aa9.51□□□□□ -0.89
SMCO2-206ENST00000543991 TBX22Q9Y458 520 aa9.51□□□□□ -0.89
SMCO2-206ENST00000543991 SHROOM2Q13796 1616 aa9.51□□□□□ -0.89
SMCO2-206ENST00000543991 HTR3BO95264 441 aa9.5□□□□□ -0.89
SMCO2-206ENST00000543991 SLFN14P0C7P3 912 aa9.5□□□□□ -0.89
SMCO2-206ENST00000543991 DGKGP49619 791 aa9.5□□□□□ -0.89
SMCO2-206ENST00000543991 CASP7P55210 303 aa9.5□□□□□ -0.89
SMCO2-206ENST00000543991 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
SMCO2-206ENST00000543991 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
SMCO2-206ENST00000543991 SRPK1Q96SB4 655 aaKnown RBP9.5□□□□□ -0.89
SMCO2-206ENST00000543991 PRG4Q92954 1404 aaPredicted RBP9.49□□□□□ -0.89
SMCO2-206ENST00000543991 MEIS3P2A8K0S8 358 aa9.49□□□□□ -0.89
SMCO2-206ENST00000543991 DLGAP3O95886 979 aa9.49□□□□□ -0.89
SMCO2-206ENST00000543991 MLECQ14165 292 aa9.49□□□□□ -0.89
SMCO2-206ENST00000543991 ZC3H12AQ5D1E8 599 aaKnown RBP9.49□□□□□ -0.89
SMCO2-206ENST00000543991 TRAPPC3LQ5T215 181 aa9.49□□□□□ -0.89
SMCO2-206ENST00000543991 C19orf47Q8N9M1 422 aaKnown RBP9.49□□□□□ -0.89
SMCO2-206ENST00000543991 WDR18Q9BV38 432 aa9.49□□□□□ -0.89
SMCO2-206ENST00000543991 KCNK4Q9NYG8 393 aa9.49□□□□□ -0.89
SMCO2-206ENST00000543991 CORINQ9Y5Q5 1042 aa9.49□□□□□ -0.89
SMCO2-206ENST00000543991 SYNGAP1Q96PV0 1343 aa9.49□□□□□ -0.89
SMCO2-206ENST00000543991 DCDC2CA8MYV0 355 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 AOC2O75106 756 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 HOXB4P17483 251 aaPredicted RBP9.48□□□□□ -0.89
SMCO2-206ENST00000543991 GMPRP36959 345 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 PDE4BQ07343 736 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 SDE2Q6IQ49 451 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 CELF2-AS1Q8N7Q2 184 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 DEPDC7Q96QD5 511 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 TM9SF2Q99805 663 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 TNKS2Q9H2K2 1166 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 REV1Q9UBZ9 1251 aa9.48□□□□□ -0.89
SMCO2-206ENST00000543991 TOP2BQ02880 1626 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 PLCG1P19174 1290 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 DDR2Q16832 855 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 EXOSC6Q5RKV6 272 aaKnown RBP9.47□□□□□ -0.89
SMCO2-206ENST00000543991 C12orf40Q86WS4 652 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 FBXO11Q86XK2 927 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 TMEM40Q8WWA1 233 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 PUS7Q96PZ0 661 aaKnown RBP9.47□□□□□ -0.89
SMCO2-206ENST00000543991 CCDC113Q9H0I3 377 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 ANTXR1Q9H6X2 564 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 RAD18Q9NS91 495 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 SNTG2Q9NY99 539 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 GMIPQ9P107 970 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 MSRB2Q9Y3D2 182 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 PCDHGC5Q9Y5F6 944 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 PBRM1Q86U86 1689 aa9.47□□□□□ -0.89
SMCO2-206ENST00000543991 DLL1O00548 723 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 RAC1P63000 192 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 RING1Q06587 406 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 RASA3Q14644 834 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 PPP2R5EQ16537 467 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 FXNQ16595 210 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 TMEM201Q5SNT2 666 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 RUFY4Q6ZNE9 571 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 JAZF1Q86VZ6 243 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 WHAMMQ8TF30 809 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 UBASH3BQ8TF42 649 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 RRAGCQ9HB90 399 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 ADAM30Q9UKF2 790 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 TSPOAP1O95153 1857 aa9.46□□□□□ -0.9
SMCO2-206ENST00000543991 A0A0A0MRY4 1105 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 PRAMEF27A3QJZ7 478 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 ERVK-24P63145 666 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 DUOXA2Q1HG44 320 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 LCE2CQ5TA81 110 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 LARP1BQ659C4 914 aaKnown RBP9.45□□□□□ -0.9
SMCO2-206ENST00000543991 FMR1NBQ8N0W7 255 aaPredicted RBP9.45□□□□□ -0.9
SMCO2-206ENST00000543991 NLGN1Q8N2Q7 840 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 TAB3Q8N5C8 712 aaPredicted RBP9.45□□□□□ -0.9
SMCO2-206ENST00000543991 ST7Q9NRC1 585 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 ENAMQ9NRM1 1142 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 HIF3AQ9Y2N7 669 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 CSADQ9Y600 493 aa9.45□□□□□ -0.9
SMCO2-206ENST00000543991 A0A1W2PQH9 124 aa9.44□□□□□ -0.9
SMCO2-206ENST00000543991 FAM221BA6H8Z2 402 aa9.44□□□□□ -0.9
SMCO2-206ENST00000543991 SLC22A31A6NKX4 558 aa9.44□□□□□ -0.9
SMCO2-206ENST00000543991 GUCY2CP25092 1073 aa9.44□□□□□ -0.9
SMCO2-206ENST00000543991 GRK4P32298 578 aa9.44□□□□□ -0.9
SMCO2-206ENST00000543991 ID3Q02535 119 aa9.44□□□□□ -0.9
SMCO2-206ENST00000543991 TTC6Q86TZ1 520 aa9.44□□□□□ -0.9
SMCO2-206ENST00000543991 ZSCAN1Q8NBB4 408 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms