RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 KCNQ5Q9NR82 932 aa23.21■■□□□ 1.31
COPS7A-218ENST00000543939 TNKSO95271 1327 aa23.21■■□□□ 1.31
COPS7A-218ENST00000543939 ADAMTSL1Q8N6G6 1762 aa23.2■■□□□ 1.3
COPS7A-218ENST00000543939 GOLGA8AA7E2F4 631 aa23.2■■□□□ 1.3
COPS7A-218ENST00000543939 ZBTB7AO95365 584 aa23.2■■□□□ 1.3
COPS7A-218ENST00000543939 RXRAP19793 462 aa23.2■■□□□ 1.3
COPS7A-218ENST00000543939 CDC27P30260 824 aa23.2■■□□□ 1.3
COPS7A-218ENST00000543939 AOC3Q16853 763 aa23.2■■□□□ 1.3
COPS7A-218ENST00000543939 TMEM87AQ8NBN3 555 aa23.2■■□□□ 1.3
COPS7A-218ENST00000543939 ZSCAN10Q96SZ4 725 aaPredicted RBP23.2■■□□□ 1.3
COPS7A-218ENST00000543939 FAM217BQ9NTX9 383 aaPredicted RBP23.2■■□□□ 1.3
COPS7A-218ENST00000543939 F8W031 263 aaPredicted RBP23.19■■□□□ 1.3
COPS7A-218ENST00000543939 H3BQV1 296 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 ADD1P35611 737 aaKnown RBP23.19■■□□□ 1.3
COPS7A-218ENST00000543939 NT5C2P49902 561 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 RCAN1P53805 252 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 IFFO2Q5TF58 517 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 SYNE3Q6ZMZ3 975 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 FERMT3Q86UX7 667 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 AMOTL1Q8IY63 956 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 MYL10Q9BUA6 226 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 CNPY2Q9Y2B0 182 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 DDX49Q9Y6V7 483 aaKnown RBP23.19■■□□□ 1.3
COPS7A-218ENST00000543939 PSME4Q14997 1843 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 PPFIA3O75145 1194 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 CCDC93Q567U6 631 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 DACT2Q5SW24 774 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 HHIPL2Q6UWX4 724 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 IQCA1Q86XH1 822 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 ENAHQ8N8S7 591 aaPredicted RBP23.19■■□□□ 1.3
COPS7A-218ENST00000543939 MTFR1LQ9H019 292 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 ORC3Q9UBD5 711 aaPredicted RBP23.19■■□□□ 1.3
COPS7A-218ENST00000543939 FLT1P17948 1338 aa23.19■■□□□ 1.3
COPS7A-218ENST00000543939 ECM29Q5VYK3 1845 aa23.18■■□□□ 1.3
COPS7A-218ENST00000543939 DNM1Q05193 864 aaKnown RBP23.18■■□□□ 1.3
COPS7A-218ENST00000543939 NTRK3Q16288 839 aa23.18■■□□□ 1.3
COPS7A-218ENST00000543939 RTKN2Q8IZC4 609 aa23.18■■□□□ 1.3
COPS7A-218ENST00000543939 MYH15Q9Y2K3 1946 aa23.18■■□□□ 1.3
COPS7A-218ENST00000543939 CDKL5O76039 1030 aa23.17■■□□□ 1.3
COPS7A-218ENST00000543939 RESTQ13127 1097 aa23.17■■□□□ 1.3
COPS7A-218ENST00000543939 SLC4A8Q2Y0W8 1093 aa23.17■■□□□ 1.3
COPS7A-218ENST00000543939 CPLX2Q6PUV4 134 aaKnown RBP23.17■■□□□ 1.3
COPS7A-218ENST00000543939 USP48Q86UV5 1035 aa23.17■■□□□ 1.3
COPS7A-218ENST00000543939 ZNF654Q8IZM8 581 aa23.17■■□□□ 1.3
COPS7A-218ENST00000543939 GDPD2Q9HCC8 539 aa23.17■■□□□ 1.3
COPS7A-218ENST00000543939 SAP30BPQ9UHR5 308 aaKnown RBP23.17■■□□□ 1.3
COPS7A-218ENST00000543939 ATF5Q9Y2D1 282 aaPredicted RBP23.17■■□□□ 1.3
COPS7A-218ENST00000543939 USP17L3A6NCW0 530 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 USP17L4A6NCW7 530 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 POLR3DP05423 398 aaPredicted RBP23.16■■□□□ 1.3
COPS7A-218ENST00000543939 SCNN1DP51172 638 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 PLCD1P51178 756 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 TGFB2P61812 414 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 USP17L1Q7RTZ2 530 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 CCDC144CPQ8IYA2 1237 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 DYNLL2Q96FJ2 89 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 PSMD1Q99460 953 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 MRIQ9BWK5 157 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 GZF1Q9H116 711 aaPredicted RBP23.16■■□□□ 1.3
COPS7A-218ENST00000543939 PPIP5K2O43314 1243 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 POLD1P28340 1107 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 GPT2Q8TD30 523 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 TEKT1Q969V4 418 aa23.16■■□□□ 1.3
COPS7A-218ENST00000543939 ZSCAN16Q9H4T2 348 aaPredicted RBP23.16■■□□□ 1.3
COPS7A-218ENST00000543939 FAM47AQ5JRC9 791 aa23.15■■□□□ 1.3
COPS7A-218ENST00000543939 ILDR1Q86SU0 546 aaPredicted RBP23.15■■□□□ 1.3
COPS7A-218ENST00000543939 RGS22Q8NE09 1264 aa23.15■■□□□ 1.3
COPS7A-218ENST00000543939 BRCA1P38398 1863 aaKnown RBP23.15■■□□□ 1.3
COPS7A-218ENST00000543939 FOSBP53539 338 aa23.14■■□□□ 1.3
COPS7A-218ENST00000543939 RTN1Q16799 776 aa23.14■■□□□ 1.3
COPS7A-218ENST00000543939 IFIT1BQ5T764 474 aaKnown RBP23.14■■□□□ 1.3
COPS7A-218ENST00000543939 TSPY2A6NKD2 308 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 NCLP19338 710 aaKnown RBP23.13■■□□□ 1.29
COPS7A-218ENST00000543939 DEKP35659 375 aaKnown RBP23.13■■□□□ 1.29
COPS7A-218ENST00000543939 CRKP46108 304 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 HDLBPQ00341 1268 aaKnown RBP23.13■■□□□ 1.29
COPS7A-218ENST00000543939 APOBEC3HQ6NTF7 200 aaKnown RBP23.13■■□□□ 1.29
COPS7A-218ENST00000543939 FAM173BQ6P4H8 233 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 STK36Q9NRP7 1315 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 YDJCA8MPS7 323 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 WDHD1O75717 1129 aaPredicted RBP23.13■■□□□ 1.29
COPS7A-218ENST00000543939 IFNAR1P17181 557 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 FANCBQ8NB91 859 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 C8orf76Q96K31 380 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 ZDHHC15Q96MV8 337 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 USP40Q9NVE5 1235 aa23.13■■□□□ 1.29
COPS7A-218ENST00000543939 CCDC196A0A1B0GTZ2 297 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 NMT2O60551 498 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 MBD3O95983 291 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 IARSP41252 1262 aaKnown RBP23.12■■□□□ 1.29
COPS7A-218ENST00000543939 KRT85P78386 507 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 R3HDM1Q15032 1099 aaKnown RBP23.12■■□□□ 1.29
COPS7A-218ENST00000543939 PPP2R5BQ15173 497 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 C16orf86Q6ZW13 317 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 KIAA0825Q8IV33 1275 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 PHKBQ93100 1093 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 MKNK2Q9HBH9 465 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 PIM2Q9P1W9 311 aa23.12■■□□□ 1.29
COPS7A-218ENST00000543939 FIBPO43427 364 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 GADD45BO75293 160 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms