RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 TTF2Q9UNY4 1162 aaKnown RBP9.7□□□□□ -0.86
ABCB1-210ENST00000543898 JRKLQ9Y4A0 524 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 SYNRGQ9UMZ2 1314 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 MED23Q9ULK4 1368 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 NEURL4Q96JN8 1562 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 N4BP1O75113 896 aaKnown RBP9.7□□□□□ -0.86
ABCB1-210ENST00000543898 MAP3K9P80192 1104 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 WTAPQ15007 396 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 ENOX2Q16206 610 aaKnown RBP9.7□□□□□ -0.86
ABCB1-210ENST00000543898 PSMB7Q99436 277 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 BPIFA3Q9BQP9 254 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
ABCB1-210ENST00000543898 KIDINS220Q9ULH0 1771 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 MROH1Q8NDA8 1641 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 ZNF174Q15697 407 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 NCAPH2Q6IBW4 605 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 PI16Q6UXB8 463 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 BLZF1Q9H2G9 400 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 LRP2BPQ9P2M1 347 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 LCMT1Q9UIC8 334 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 RANBP6O60518 1105 aaKnown RBP9.7□□□□□ -0.86
ABCB1-210ENST00000543898 ODF2Q5BJF6 829 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 SHC4Q6S5L8 630 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 SRLQ86TD4 932 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 HELBQ8NG08 1087 aaPredicted RBP9.7□□□□□ -0.86
ABCB1-210ENST00000543898 APPBP2Q92624 585 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 EEF2KMTQ96G04 330 aa9.7□□□□□ -0.86
ABCB1-210ENST00000543898 MYCBPQ99417 103 aaPredicted RBP9.7□□□□□ -0.86
ABCB1-210ENST00000543898 GOLGA6CA6NDK9 693 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 TEX33O43247 280 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 GOLGA6DP0CG33 693 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 CASP1P29466 404 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 TMEM132AQ24JP5 1023 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 IFNL2Q8IZJ0 200 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 KAZALD1Q96I82 304 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 PLIN2Q99541 437 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 TANGO6Q9C0B7 1094 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 GOLGA6AQ9NYA3 693 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 MYO6Q9UM54 1294 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 ZNF609O15014 1411 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 EIF3CLB5ME19 914 aaKnown RBP9.69□□□□□ -0.86
ABCB1-210ENST00000543898 MARCH6O60337 910 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 RNF40O75150 1001 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 CCT5P48643 541 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 EXOSC10Q01780 885 aaKnown RBP9.69□□□□□ -0.86
ABCB1-210ENST00000543898 CCDC96Q2M329 555 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 EIF3CQ99613 913 aaKnown RBP9.69□□□□□ -0.86
ABCB1-210ENST00000543898 MRPL44Q9H9J2 332 aaKnown RBP9.69□□□□□ -0.86
ABCB1-210ENST00000543898 WWC3Q9ULE0 1092 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 LUC7L2Q9Y383 392 aaKnown RBP9.69□□□□□ -0.86
ABCB1-210ENST00000543898 ATP2C2O75185 946 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 ADORA1P30542 326 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 CTDSPL2Q05D32 466 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 CCDC93Q567U6 631 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 RILPL1Q5EBL4 403 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 TRIM65Q6PJ69 517 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 KIF6Q6ZMV9 814 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 TMTC1Q8IUR5 882 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 GIMAP7Q8NHV1 300 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 FAM71BQ8TC56 605 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 TRIM47Q96LD4 638 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 FUT8Q9BYC5 575 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 EFCC1Q9HA90 598 aa9.69□□□□□ -0.86
ABCB1-210ENST00000543898 PAFAH1B1P43034 410 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 NCAPHQ15003 741 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 CHRNA2Q15822 529 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 CYP26C1Q6V0L0 522 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 NOSTRINQ8IVI9 506 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 HECW2Q9P2P5 1572 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 H3BQF6 201 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 ERLIN2O94905 339 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 MTIF2P46199 727 aaKnown RBP9.68□□□□□ -0.86
ABCB1-210ENST00000543898 TUBB4BP68371 445 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 CKAP4Q07065 602 aaKnown RBP9.68□□□□□ -0.86
ABCB1-210ENST00000543898 PDE4BQ07343 736 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 CTCFLQ8NI51 663 aaPredicted RBP9.68□□□□□ -0.86
ABCB1-210ENST00000543898 FAM89AQ96GI7 184 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 GNL3LQ9NVN8 582 aaKnown RBP9.68□□□□□ -0.86
ABCB1-210ENST00000543898 PIK3C2BO00750 1634 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 GOLGA6L10A6NI86 522 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 KRT86O43790 486 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 ZRANB2O95218 330 aaKnown RBP eCLIP9.68□□□□□ -0.86
ABCB1-210ENST00000543898 TUBBP07437 444 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 SND1Q7KZF4 910 aaKnown RBP eCLIP9.68□□□□□ -0.869e-7■■■■□ 26.3
ABCB1-210ENST00000543898 OTUD6BQ8N6M0 293 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 PAIP2Q9BPZ3 127 aaKnown RBP9.68□□□□□ -0.86
ABCB1-210ENST00000543898 PUS7LQ9H0K6 701 aaKnown RBP9.68□□□□□ -0.86
ABCB1-210ENST00000543898 SH3TC1Q8TE82 1336 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 PPP6R2O75170 966 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 IDEP14735 1019 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 KCNJ6P48051 423 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 NLRP5P59047 1200 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 VSNL1P62760 191 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 ICE2Q659A1 982 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 METTL16Q86W50 562 aaKnown RBP9.68□□□□□ -0.86
ABCB1-210ENST00000543898 ATRIPQ8WXE1 791 aa9.68□□□□□ -0.86
ABCB1-210ENST00000543898 IQSEC3Q9UPP2 1182 aaPredicted RBP9.68□□□□□ -0.86
ABCB1-210ENST00000543898 GOLGA6BA6NDN3 693 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 A1BGP04217 495 aa9.67□□□□□ -0.86
ABCB1-210ENST00000543898 PRR29P0C7W0 189 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms