RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 KBTBD3Q8NAB2 608 aa13.71□□□□□ -0.21
COPS7A-217ENST00000543537 FSD1Q9BTV5 496 aa13.71□□□□□ -0.21
COPS7A-217ENST00000543537 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.21
COPS7A-217ENST00000543537 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.21
COPS7A-217ENST00000543537 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.21
COPS7A-217ENST00000543537 ABCF2Q9UG63 623 aa13.71□□□□□ -0.21
COPS7A-217ENST00000543537 PDIA4P13667 645 aaKnown RBP13.7□□□□□ -0.22
COPS7A-217ENST00000543537 RHBDL3P58872 404 aa13.7□□□□□ -0.22
COPS7A-217ENST00000543537 MECOMQ03112 1051 aa13.7□□□□□ -0.22
COPS7A-217ENST00000543537 PPATQ06203 517 aa13.7□□□□□ -0.22
COPS7A-217ENST00000543537 PPIL2Q13356 520 aa13.7□□□□□ -0.22
COPS7A-217ENST00000543537 TTC39AQ5SRH9 613 aa13.7□□□□□ -0.22
COPS7A-217ENST00000543537 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
COPS7A-217ENST00000543537 BRI3BPQ8WY22 251 aa13.7□□□□□ -0.22
COPS7A-217ENST00000543537 NSUN4Q96CB9 384 aaKnown RBP13.7□□□□□ -0.22
COPS7A-217ENST00000543537 CHMP4CQ96CF2 233 aa13.7□□□□□ -0.22
COPS7A-217ENST00000543537 COL2A1P02458 1487 aaPredicted RBP13.69□□□□□ -0.22
COPS7A-217ENST00000543537 CCDC85CA6NKD9 419 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 LDHCP07864 332 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 GSTO1P78417 241 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 TCP10Q12799 353 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 CRHR2Q13324 411 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 KRT32Q14532 448 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 ZFPM1Q8IX07 1006 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 DBNDD2Q9BQY9 259 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 BOLA2Q9H3K6 86 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 KCNH4Q9UQ05 1017 aa13.69□□□□□ -0.22
COPS7A-217ENST00000543537 CCL15-CCL14A0A0B4J2E2 113 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 PHF20L1A8MW92 1017 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 IRF6O14896 467 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 CETPP11597 493 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 PSMA5P28066 241 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 INPP5BP32019 993 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 HSPA4P34932 840 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 BTDP43251 543 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 SNAPC2Q13487 334 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 CCL15Q16663 113 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 FBXO46Q6PJ61 603 aaPredicted RBP13.68□□□□□ -0.22
COPS7A-217ENST00000543537 PI16Q6UXB8 463 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 MIGA2Q7L4E1 593 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 ZKSCAN4Q969J2 545 aaPredicted RBP13.68□□□□□ -0.22
COPS7A-217ENST00000543537 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 TM6SF1Q9BZW5 370 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 PAG1Q9NWQ8 432 aa13.68□□□□□ -0.22
COPS7A-217ENST00000543537 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
COPS7A-217ENST00000543537 TBC1D12O60347 775 aa13.67□□□□□ -0.22
COPS7A-217ENST00000543537 MCMDC2Q4G0Z9 681 aa13.67□□□□□ -0.22
COPS7A-217ENST00000543537 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
COPS7A-217ENST00000543537 DDX4Q9NQI0 724 aaKnown RBP13.67□□□□□ -0.22
COPS7A-217ENST00000543537 HPS5Q9UPZ3 1129 aa13.67□□□□□ -0.22
COPS7A-217ENST00000543537 PPP4CP60510 307 aa13.66□□□□□ -0.22
COPS7A-217ENST00000543537 TSHZ3Q63HK5 1081 aa13.66□□□□□ -0.22
COPS7A-217ENST00000543537 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
COPS7A-217ENST00000543537 FAM43AQ8N2R8 423 aa13.66□□□□□ -0.22
COPS7A-217ENST00000543537 ERO1AQ96HE7 468 aa13.66□□□□□ -0.22
COPS7A-217ENST00000543537 TBC1D2Q9BYX2 928 aa13.66□□□□□ -0.22
COPS7A-217ENST00000543537 ZFYVE28Q9HCC9 887 aa13.66□□□□□ -0.22
COPS7A-217ENST00000543537 CTNNA3Q9UI47 895 aa13.66□□□□□ -0.22
COPS7A-217ENST00000543537 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
COPS7A-217ENST00000543537 HTTP42858 3142 aa13.66□□□□□ -0.22
COPS7A-217ENST00000543537 DDTLA6NHG4 134 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-217ENST00000543537 K7ELQ4 463 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-217ENST00000543537 CXCL11O14625 94 aa13.65□□□□□ -0.22
COPS7A-217ENST00000543537 CYP2E1P05181 493 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-217ENST00000543537 HSP90AA1P07900 732 aaKnown RBP13.65□□□□□ -0.22
COPS7A-217ENST00000543537 HMGB1P09429 215 aaKnown RBP13.65□□□□□ -0.22
COPS7A-217ENST00000543537 SP3Q02447 781 aa13.65□□□□□ -0.22
COPS7A-217ENST00000543537 TSGA10IPQ3SY00 556 aa13.65□□□□□ -0.22
COPS7A-217ENST00000543537 OTOP1Q7RTM1 612 aa13.65□□□□□ -0.22
COPS7A-217ENST00000543537 MAP4K1Q92918 833 aa13.65□□□□□ -0.22
COPS7A-217ENST00000543537 KCNB2Q92953 911 aa13.65□□□□□ -0.22
COPS7A-217ENST00000543537 LRP2BPQ9P2M1 347 aa13.65□□□□□ -0.22
COPS7A-217ENST00000543537 DOCK2Q92608 1830 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 BTBD19C9JJ37 291 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 RNF113AO15541 343 aaKnown RBP13.64□□□□□ -0.23
COPS7A-217ENST00000543537 TLR2O60603 784 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 CTNND1O60716 968 aaKnown RBP13.64□□□□□ -0.23
COPS7A-217ENST00000543537 PLCG2P16885 1265 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 MOGSQ13724 837 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 ANKRD1Q15327 319 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 TAF1CQ15572 869 aaPredicted RBP13.64□□□□□ -0.23
COPS7A-217ENST00000543537 ANKRD23Q86SG2 305 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 SCYL3Q8IZE3 742 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 DNAJC2Q99543 621 aaKnown RBP13.64□□□□□ -0.23
COPS7A-217ENST00000543537 KIF2CQ99661 725 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 RAI14Q9P0K7 980 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
COPS7A-217ENST00000543537 MAST2Q6P0Q8 1798 aa13.63□□□□□ -0.23
COPS7A-217ENST00000543537 AK9Q5TCS8 1911 aa13.63□□□□□ -0.23
COPS7A-217ENST00000543537 PTMSP20962 102 aa13.63□□□□□ -0.23
COPS7A-217ENST00000543537 MLLT1Q03111 559 aaPredicted RBP13.63□□□□□ -0.23
COPS7A-217ENST00000543537 METTL16Q86W50 562 aaKnown RBP13.63□□□□□ -0.23
COPS7A-217ENST00000543537 CERS3Q8IU89 383 aa13.63□□□□□ -0.23
COPS7A-217ENST00000543537 DSCC1Q9BVC3 393 aa13.63□□□□□ -0.23
COPS7A-217ENST00000543537 LSG1Q9H089 658 aaKnown RBP13.63□□□□□ -0.23
COPS7A-217ENST00000543537 OSBPL5Q9H0X9 879 aaPredicted RBP13.63□□□□□ -0.23
COPS7A-217ENST00000543537 TLR7Q9NYK1 1049 aaKnown RBP13.63□□□□□ -0.23
COPS7A-217ENST00000543537 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
COPS7A-217ENST00000543537 BAG3O95817 575 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms