RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 GPAT2Q6NUI2 795 aa22.66■■□□□ 1.22
TMED3-204ENST00000543455 FBXO46Q6PJ61 603 aaPredicted RBP22.66■■□□□ 1.22
TMED3-204ENST00000543455 ANKRD23Q86SG2 305 aa22.66■■□□□ 1.22
TMED3-204ENST00000543455 EDC3Q96F86 508 aaKnown RBP22.66■■□□□ 1.22
TMED3-204ENST00000543455 BCL11AQ9H165 835 aa22.66■■□□□ 1.22
TMED3-204ENST00000543455 ADGRA2Q96PE1 1338 aa22.66■■□□□ 1.22
TMED3-204ENST00000543455 CXCL11O14625 94 aa22.66■■□□□ 1.22
TMED3-204ENST00000543455 SMARCA5O60264 1052 aaPredicted RBP22.66■■□□□ 1.22
TMED3-204ENST00000543455 RGS19P49795 217 aa22.66■■□□□ 1.22
TMED3-204ENST00000543455 ERO1AQ96HE7 468 aa22.66■■□□□ 1.22
TMED3-204ENST00000543455 PICK1Q9NRD5 415 aa22.66■■□□□ 1.22
TMED3-204ENST00000543455 TRIM17Q9Y577 477 aa22.66■■□□□ 1.22
TMED3-204ENST00000543455 DDX60LQ5H9U9 1706 aaKnown RBP22.66■■□□□ 1.22
TMED3-204ENST00000543455 TLR2O60603 784 aa22.65■■□□□ 1.22
TMED3-204ENST00000543455 RRP1P56182 461 aaKnown RBP22.65■■□□□ 1.22
TMED3-204ENST00000543455 METTL16Q86W50 562 aaKnown RBP22.65■■□□□ 1.22
TMED3-204ENST00000543455 A0A0G2JLL6 359 aaPredicted RBP22.64■■□□□ 1.21
TMED3-204ENST00000543455 PDHXO00330 501 aa22.64■■□□□ 1.21
TMED3-204ENST00000543455 JAG1P78504 1218 aa22.64■■□□□ 1.21
TMED3-204ENST00000543455 MAP3K12Q12852 859 aa22.64■■□□□ 1.21
TMED3-204ENST00000543455 PRRT2Q7Z6L0 340 aaPredicted RBP22.64■■□□□ 1.21
TMED3-204ENST00000543455 DNAJC2Q99543 621 aaKnown RBP22.64■■□□□ 1.21
TMED3-204ENST00000543455 RIOK1Q9BRS2 568 aaKnown RBP22.64■■□□□ 1.21
TMED3-204ENST00000543455 PI4KBQ9UBF8 816 aa22.64■■□□□ 1.21
TMED3-204ENST00000543455 PALD1Q9ULE6 856 aa22.64■■□□□ 1.21
TMED3-204ENST00000543455 GOLIM4O00461 696 aa22.63■■□□□ 1.21
TMED3-204ENST00000543455 PDE6AP16499 860 aa22.63■■□□□ 1.21
TMED3-204ENST00000543455 LRRCC1Q9C099 1032 aa22.63■■□□□ 1.21
TMED3-204ENST00000543455 DHX36Q9H2U1 1008 aaKnown RBP22.63■■□□□ 1.21
TMED3-204ENST00000543455 DCTPP1Q9H773 170 aa22.63■■□□□ 1.21
TMED3-204ENST00000543455 SAP30BPQ9UHR5 308 aaKnown RBP22.63■■□□□ 1.21
TMED3-204ENST00000543455 HERC5Q9UII4 1024 aaKnown RBP22.63■■□□□ 1.21
TMED3-204ENST00000543455 PCDHB15Q9Y5E8 787 aa22.63■■□□□ 1.21
TMED3-204ENST00000543455 CENPFP49454 3210 aa22.62■■□□□ 1.21
TMED3-204ENST00000543455 TCRBV5S4A2TA0A5A2 114 aa22.62■■□□□ 1.21
TMED3-204ENST00000543455 ATP5JP18859 108 aa22.62■■□□□ 1.21
TMED3-204ENST00000543455 CAP2P40123 477 aa22.62■■□□□ 1.21
TMED3-204ENST00000543455 BOLA2Q9H3K6 86 aa22.62■■□□□ 1.21
TMED3-204ENST00000543455 MYH7P12883 1935 aa22.61■■□□□ 1.21
TMED3-204ENST00000543455 LOC285556D6RIA3 1793 aa22.61■■□□□ 1.21
TMED3-204ENST00000543455 SOX10P56693 466 aa22.61■■□□□ 1.21
TMED3-204ENST00000543455 TTF1Q15361 905 aaPredicted RBP22.61■■□□□ 1.21
TMED3-204ENST00000543455 SHROOM1Q2M3G4 852 aaPredicted RBP22.61■■□□□ 1.21
TMED3-204ENST00000543455 TMED8Q6PL24 325 aaPredicted RBP22.61■■□□□ 1.21
TMED3-204ENST00000543455 C17orf99Q6UX52 265 aa22.61■■□□□ 1.21
TMED3-204ENST00000543455 ARHGAP39Q9C0H5 1083 aa22.61■■□□□ 1.21
TMED3-204ENST00000543455 EFCC1Q9HA90 598 aa22.61■■□□□ 1.21
TMED3-204ENST00000543455 TRIM75PA6NK02 468 aa22.6■■□□□ 1.21
TMED3-204ENST00000543455 SLC4A8Q2Y0W8 1093 aa22.6■■□□□ 1.21
TMED3-204ENST00000543455 SLFNL1Q499Z3 407 aa22.6■■□□□ 1.21
TMED3-204ENST00000543455 SLC9C2Q5TAH2 1124 aa22.6■■□□□ 1.21
TMED3-204ENST00000543455 PTPN22Q9Y2R2 807 aa22.6■■□□□ 1.21
TMED3-204ENST00000543455 NAV1Q8NEY1 1877 aa22.6■■□□□ 1.21
TMED3-204ENST00000543455 HAUS7Q99871 368 aa22.6■■□□□ 1.21
TMED3-204ENST00000543455 PAG1Q9NWQ8 432 aa22.6■■□□□ 1.21
TMED3-204ENST00000543455 CPA4Q9UI42 421 aa22.6■■□□□ 1.21
TMED3-204ENST00000543455 ZNF532Q9HCE3 1301 aa22.59■■□□□ 1.21
TMED3-204ENST00000543455 CHGBP05060 677 aa22.59■■□□□ 1.21
TMED3-204ENST00000543455 CYP2C8P10632 490 aa22.59■■□□□ 1.21
TMED3-204ENST00000543455 CTGFP29279 349 aa22.59■■□□□ 1.21
TMED3-204ENST00000543455 FOXP4Q8IVH2 680 aaPredicted RBP22.59■■□□□ 1.21
TMED3-204ENST00000543455 LACTBP83111 547 aaPredicted RBP22.58■■□□□ 1.2
TMED3-204ENST00000543455 GADL1Q6ZQY3 521 aa22.58■■□□□ 1.2
TMED3-204ENST00000543455 CERS3Q8IU89 383 aa22.58■■□□□ 1.2
TMED3-204ENST00000543455 MAGEB6P1A0A0J9YX57 407 aa22.57■■□□□ 1.2
TMED3-204ENST00000543455 USP5P45974 858 aa22.57■■□□□ 1.2
TMED3-204ENST00000543455 FASTKD5Q7L8L6 764 aaKnown RBP22.57■■□□□ 1.2
TMED3-204ENST00000543455 BCRP11274 1271 aa22.56■■□□□ 1.2
TMED3-204ENST00000543455 EVX2Q03828 476 aa22.56■■□□□ 1.2
TMED3-204ENST00000543455 SPP2Q13103 211 aa22.56■■□□□ 1.2
TMED3-204ENST00000543455 TREML2Q5T2D2 321 aa22.56■■□□□ 1.2
TMED3-204ENST00000543455 LCORLQ8N3X6 602 aa22.56■■□□□ 1.2
TMED3-204ENST00000543455 ZNF280CQ8ND82 737 aa22.56■■□□□ 1.2
TMED3-204ENST00000543455 CRBNQ96SW2 442 aa22.56■■□□□ 1.2
TMED3-204ENST00000543455 USP17L5A8MUK1 530 aa22.55■■□□□ 1.2
TMED3-204ENST00000543455 GDF11O95390 407 aa22.55■■□□□ 1.2
TMED3-204ENST00000543455 ADD2P35612 726 aa22.55■■□□□ 1.2
TMED3-204ENST00000543455 PARK7Q99497 189 aaKnown RBP22.55■■□□□ 1.2
TMED3-204ENST00000543455 SLC45A1Q9Y2W3 748 aa22.55■■□□□ 1.2
TMED3-204ENST00000543455 MGAMO43451 1857 aa22.55■■□□□ 1.2
TMED3-204ENST00000543455 TNRC18O15417 2968 aaPredicted RBP22.55■■□□□ 1.2
TMED3-204ENST00000543455 HLA-DOAP06340 250 aa22.54■■□□□ 1.2
TMED3-204ENST00000543455 CRACR2BQ8N4Y2 399 aaPredicted RBP22.54■■□□□ 1.2
TMED3-204ENST00000543455 AGTPBP1Q9UPW5 1226 aa22.54■■□□□ 1.2
TMED3-204ENST00000543455 BRCA2P51587 3418 aa22.54■■□□□ 1.2
TMED3-204ENST00000543455 PLCD1P51178 756 aa22.54■■□□□ 1.2
TMED3-204ENST00000543455 TSHZ3Q63HK5 1081 aa22.54■■□□□ 1.2
TMED3-204ENST00000543455 EHD4Q9H223 541 aa22.54■■□□□ 1.2
TMED3-204ENST00000543455 PTCH2Q9Y6C5 1203 aa22.54■■□□□ 1.2
TMED3-204ENST00000543455 BAZ2AQ9UIF9 1905 aaKnown RBP22.53■■□□□ 1.2
TMED3-204ENST00000543455 ECM2O94769 699 aaPredicted RBP22.53■■□□□ 1.2
TMED3-204ENST00000543455 HMGCS2P54868 508 aa22.53■■□□□ 1.2
TMED3-204ENST00000543455 MLLT1Q03111 559 aaPredicted RBP22.53■■□□□ 1.2
TMED3-204ENST00000543455 SH3D19Q5HYK7 790 aa22.53■■□□□ 1.2
TMED3-204ENST00000543455 TATDN1Q6P1N9 297 aa22.53■■□□□ 1.2
TMED3-204ENST00000543455 PROCA1Q8NCQ7 364 aaPredicted RBP22.53■■□□□ 1.2
TMED3-204ENST00000543455 TRIM47Q96LD4 638 aa22.53■■□□□ 1.2
TMED3-204ENST00000543455 WDR18Q9BV38 432 aa22.53■■□□□ 1.2
TMED3-204ENST00000543455 TBC1D2Q9BYX2 928 aa22.53■■□□□ 1.2
TMED3-204ENST00000543455 ECHDC1Q9NTX5 307 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms