RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 ZBTB43O43298 467 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 RANBP6O60518 1105 aaKnown RBP27.04■■□□□ 1.92
SHD-201ENST00000543264 RHOXF2BP0C7M4 288 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 RBL2Q08999 1139 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 PPFIBP1Q86W92 1011 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 PANX2Q96RD6 677 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 RHOXF2Q9BQY4 288 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 B4E1Z4 1266 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 CIAO1O76071 339 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 TFRCP02786 760 aaKnown RBP27.04■■□□□ 1.92
SHD-201ENST00000543264 SLC26A6Q9BXS9 759 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 BTBD18B2RXH4 712 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 NBPF26B4DH59 902 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 SARSP49591 514 aaKnown RBP27.04■■□□□ 1.92
SHD-201ENST00000543264 NBPF14Q5TI25 921 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 NBPF10Q6P3W6 841 aaKnown RBP27.04■■□□□ 1.92
SHD-201ENST00000543264 NBPF15Q8N660 670 aa27.04■■□□□ 1.92
SHD-201ENST00000543264 CCDC85AQ96PX6 553 aaPredicted RBP27.04■■□□□ 1.92
SHD-201ENST00000543264 GOLGA8AA7E2F4 631 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 ERLIN1O75477 346 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 NTRK3Q16288 839 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 IGSF22Q8N9C0 903 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 ZBTB3Q9H5J0 574 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 L1RE1Q9UN81 338 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 FAN1Q9Y2M0 1017 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 UBN2Q6ZU65 1347 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 A0A1B0GTH6 734 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 RAB21Q9UL25 225 aa27.03■■□□□ 1.92
SHD-201ENST00000543264 POTEB2H3BUK9 544 aa27.02■■□□□ 1.92
SHD-201ENST00000543264 NT5DC1Q5TFE4 455 aa27.02■■□□□ 1.92
SHD-201ENST00000543264 NOSTRINQ8IVI9 506 aa27.02■■□□□ 1.92
SHD-201ENST00000543264 ELOA2Q8IYF1 753 aaPredicted RBP27.02■■□□□ 1.92
SHD-201ENST00000543264 SCN11AQ9UI33 1791 aa27.02■■□□□ 1.92
SHD-201ENST00000543264 SLIT3O75094 1523 aa27.02■■□□□ 1.92
SHD-201ENST00000543264 EIF3JO75822 258 aaKnown RBP27.02■■□□□ 1.92
SHD-201ENST00000543264 USP5P45974 858 aa27.02■■□□□ 1.92
SHD-201ENST00000543264 TOB1P50616 345 aaPredicted RBP27.02■■□□□ 1.92
SHD-201ENST00000543264 SEC31BQ9NQW1 1179 aa27.02■■□□□ 1.92
SHD-201ENST00000543264 CCDC57Q2TAC2 916 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 KLHL10Q6JEL2 608 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 IQUBQ8NA54 791 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 MSANTD4Q8NCY6 345 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 ATG3Q9NT62 314 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 SPEF2Q9C093 1822 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 ATP2B1P20020 1258 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 STX17P56962 302 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 CABP4P57796 275 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 INCENPQ9NQS7 918 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 FAM217BQ9NTX9 383 aaPredicted RBP27.01■■□□□ 1.91
SHD-201ENST00000543264 FBXO2Q9UK22 296 aaPredicted RBP27.01■■□□□ 1.91
SHD-201ENST00000543264 AKAP2Q9Y2D5 859 aa27.01■■□□□ 1.91
SHD-201ENST00000543264 PLCD1P51178 756 aa27■■□□□ 1.91
SHD-201ENST00000543264 SSRP1Q08945 709 aaKnown RBP27■■□□□ 1.91
SHD-201ENST00000543264 KCNJ14Q9UNX9 436 aa27■■□□□ 1.91
SHD-201ENST00000543264 CTAGE9A4FU28 777 aa27■■□□□ 1.91
SHD-201ENST00000543264 PHACTR2O75167 634 aa27■■□□□ 1.91
SHD-201ENST00000543264 PTPREP23469 700 aa27■■□□□ 1.91
SHD-201ENST00000543264 FOXR1Q6PIV2 292 aa27■■□□□ 1.91
SHD-201ENST00000543264 SLC35F6Q8N357 371 aa27■■□□□ 1.91
SHD-201ENST00000543264 CCDC102AQ96A19 550 aa26.99■■□□□ 1.91
SHD-201ENST00000543264 DCAF5Q96JK2 942 aa26.99■■□□□ 1.91
SHD-201ENST00000543264 VSNL1P62760 191 aa26.99■■□□□ 1.91
SHD-201ENST00000543264 TMEM67Q5HYA8 995 aa26.99■■□□□ 1.91
SHD-201ENST00000543264 USP49Q70CQ1 688 aa26.99■■□□□ 1.91
SHD-201ENST00000543264 IGDCC4Q8TDY8 1250 aa26.99■■□□□ 1.91
SHD-201ENST00000543264 CDC5LQ99459 802 aaKnown RBP26.99■■□□□ 1.91
SHD-201ENST00000543264 TMEM94Q12767 1356 aa26.98■■□□□ 1.91
SHD-201ENST00000543264 RGPD5Q99666 1765 aa26.98■■□□□ 1.91
SHD-201ENST00000543264 IVLP07476 585 aa26.98■■□□□ 1.91
SHD-201ENST00000543264 GUCY1A2P33402 732 aa26.98■■□□□ 1.91
SHD-201ENST00000543264 DIS3L2Q8IYB7 885 aaKnown RBP26.98■■□□□ 1.91
SHD-201ENST00000543264 TRIML1Q8N9V2 468 aa26.98■■□□□ 1.91
SHD-201ENST00000543264 NAA15Q9BXJ9 866 aaKnown RBP26.98■■□□□ 1.91
SHD-201ENST00000543264 CYP27B1O15528 508 aa26.98■■□□□ 1.91
SHD-201ENST00000543264 SAFBQ15424 915 aaKnown RBP eCLIP26.98■■□□□ 1.91
SHD-201ENST00000543264 ABL1P00519 1130 aa26.97■■□□□ 1.91
SHD-201ENST00000543264 CASP14P31944 242 aa26.97■■□□□ 1.91
SHD-201ENST00000543264 CASP8Q14790 479 aa26.97■■□□□ 1.91
SHD-201ENST00000543264 RASGRP2Q7LDG7 609 aa26.97■■□□□ 1.91
SHD-201ENST00000543264 APTXQ7Z2E3 356 aaKnown RBP26.97■■□□□ 1.91
SHD-201ENST00000543264 PCDHB6Q9Y5E3 794 aa26.97■■□□□ 1.91
SHD-201ENST00000543264 ERCC5P28715 1186 aaPredicted RBP26.97■■□□□ 1.91
SHD-201ENST00000543264 CCDC82Q8N4S0 544 aa26.97■■□□□ 1.91
SHD-201ENST00000543264 LY9Q9HBG7 655 aa26.97■■□□□ 1.91
SHD-201ENST00000543264 A1BGP04217 495 aa26.96■■□□□ 1.91
SHD-201ENST00000543264 HSP90B2PQ58FF3 399 aa26.96■■□□□ 1.91
SHD-201ENST00000543264 ACRBPQ8NEB7 543 aa26.96■■□□□ 1.91
SHD-201ENST00000543264 TMEM87BQ96K49 555 aa26.96■■□□□ 1.91
SHD-201ENST00000543264 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.96■■□□□ 1.91
SHD-201ENST00000543264 LMTK3Q96Q04 1460 aa26.96■■□□□ 1.91
SHD-201ENST00000543264 DDX60Q8IY21 1712 aaKnown RBP26.96■■□□□ 1.91
SHD-201ENST00000543264 ACTN4O43707 911 aaKnown RBP26.96■■□□□ 1.91
SHD-201ENST00000543264 CTAGE15A4D2H0 777 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 CTAGE8P0CG41 777 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 TAF7LQ5H9L4 462 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 CTAGE6Q86UF2 777 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 CTAGE4Q8IX94 777 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 SLC12A7Q9Y666 1083 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 MFAP3LO75121 409 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 MMP1P03956 469 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms