RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 SSBP4Q9BWG4 385 aaPredicted RBP9.42□□□□□ -0.9
PAAF1-212ENST00000543079 KIF1AQ12756 1690 aa9.42□□□□□ -0.9
PAAF1-212ENST00000543079 DLL1O00548 723 aa9.41□□□□□ -0.9
PAAF1-212ENST00000543079 YBX3P16989 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
PAAF1-212ENST00000543079 HYAL2Q12891 473 aa9.41□□□□□ -0.9
PAAF1-212ENST00000543079 GDF6Q6KF10 455 aaPredicted RBP9.41□□□□□ -0.9
PAAF1-212ENST00000543079 WFDC12Q8WWY7 111 aa9.41□□□□□ -0.9
PAAF1-212ENST00000543079 SLC12A5Q9H2X9 1139 aa9.41□□□□□ -0.9
PAAF1-212ENST00000543079 SRA1Q9HD15 236 aaKnown RBP9.41□□□□□ -0.9
PAAF1-212ENST00000543079 ABCA3Q99758 1704 aa9.41□□□□□ -0.9
PAAF1-212ENST00000543079 GRIN3BO60391 1043 aa9.4□□□□□ -0.9
PAAF1-212ENST00000543079 NLGN2Q8NFZ4 835 aa9.4□□□□□ -0.9
PAAF1-212ENST00000543079 HELQQ8TDG4 1101 aa9.4□□□□□ -0.9
PAAF1-212ENST00000543079 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
PAAF1-212ENST00000543079 ABI2Q9NYB9 513 aaPredicted RBP9.4□□□□□ -0.9
PAAF1-212ENST00000543079 PPIP5K1Q6PFW1 1433 aa9.39□□□□□ -0.91
PAAF1-212ENST00000543079 TOPAZ1Q8N9V7 1692 aa9.39□□□□□ -0.91
PAAF1-212ENST00000543079 PDE12Q6L8Q7 609 aaKnown RBP9.39□□□□□ -0.91
PAAF1-212ENST00000543079 MAP4K3Q8IVH8 894 aa9.39□□□□□ -0.91
PAAF1-212ENST00000543079 TP53INP1Q96A56 240 aa9.39□□□□□ -0.91
PAAF1-212ENST00000543079 TRIM33Q9UPN9 1127 aa9.39□□□□□ -0.91
PAAF1-212ENST00000543079 THRAP3Q9Y2W1 955 aaKnown RBP9.39□□□□□ -0.91
PAAF1-212ENST00000543079 RGPD8O14715 1765 aaPredicted RBP9.39□□□□□ -0.91
PAAF1-212ENST00000543079 CD163L1Q9NR16 1453 aa9.39□□□□□ -0.91
PAAF1-212ENST00000543079 SSH2Q76I76 1423 aa9.39□□□□□ -0.91
PAAF1-212ENST00000543079 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
PAAF1-212ENST00000543079 TMEM88BA6NKF7 163 aa9.38□□□□□ -0.91
PAAF1-212ENST00000543079 KIF4AO95239 1232 aa9.38□□□□□ -0.91
PAAF1-212ENST00000543079 RPLP1P05386 114 aaKnown RBP9.38□□□□□ -0.91
PAAF1-212ENST00000543079 SSFA2P28290 1259 aa9.38□□□□□ -0.91
PAAF1-212ENST00000543079 NOS3P29474 1203 aa9.38□□□□□ -0.91
PAAF1-212ENST00000543079 SCNN1AP37088 669 aa9.38□□□□□ -0.91
PAAF1-212ENST00000543079 IREB2P48200 963 aaKnown RBP9.38□□□□□ -0.91
PAAF1-212ENST00000543079 PRSS36Q5K4E3 855 aa9.38□□□□□ -0.91
PAAF1-212ENST00000543079 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
PAAF1-212ENST00000543079 NUTM2GQ5VZR2 741 aa9.38□□□□□ -0.91
PAAF1-212ENST00000543079 MUC3BQ9H195 1237 aa9.38□□□□□ -0.91
PAAF1-212ENST00000543079 CPSF1Q10570 1443 aaKnown RBP9.38□□□□□ -0.91
PAAF1-212ENST00000543079 ACEP12821 1306 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 ATCAYQ86WG3 371 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 TMEM130Q8N3G9 435 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 TMC1Q8TDI8 760 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 POLR3GLQ9BT43 218 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 C1orf115Q9H7X2 142 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 ELP3Q9H9T3 547 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 PPME1Q9Y570 386 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 OVOS2A0A0G2JMS6 1433 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
PAAF1-212ENST00000543079 SETDB1Q15047 1291 aa9.36□□□□□ -0.91
PAAF1-212ENST00000543079 DDB1Q16531 1140 aa9.36□□□□□ -0.91
PAAF1-212ENST00000543079 NOM1Q5C9Z4 860 aaKnown RBP9.36□□□□□ -0.91
PAAF1-212ENST00000543079 XKR5Q6UX68 686 aa9.36□□□□□ -0.91
PAAF1-212ENST00000543079 MARCH10Q8NA82 808 aaPredicted RBP9.36□□□□□ -0.91
PAAF1-212ENST00000543079 A0A1W2PP64 1363 aa9.36□□□□□ -0.91
PAAF1-212ENST00000543079 ANKRD36BQ8N2N9 1353 aa9.36□□□□□ -0.91
PAAF1-212ENST00000543079 SMNDC1O75940 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
PAAF1-212ENST00000543079 POLD1P28340 1107 aa9.35□□□□□ -0.91
PAAF1-212ENST00000543079 ATP11AP98196 1134 aa9.35□□□□□ -0.91
PAAF1-212ENST00000543079 CEP135Q66GS9 1140 aa9.35□□□□□ -0.91
PAAF1-212ENST00000543079 NGDNQ8NEJ9 315 aaKnown RBP9.35□□□□□ -0.91
PAAF1-212ENST00000543079 MRPL18Q9H0U6 180 aaKnown RBP9.35□□□□□ -0.91
PAAF1-212ENST00000543079 PANK3Q9H999 370 aa9.35□□□□□ -0.91
PAAF1-212ENST00000543079 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
PAAF1-212ENST00000543079 ITSN1Q15811 1721 aa9.34□□□□□ -0.91
PAAF1-212ENST00000543079 CYP2E1P05181 493 aaPredicted RBP9.34□□□□□ -0.91
PAAF1-212ENST00000543079 ZNF438Q7Z4V0 828 aa9.34□□□□□ -0.91
PAAF1-212ENST00000543079 CEP120Q8N960 986 aa9.34□□□□□ -0.91
PAAF1-212ENST00000543079 GTF3C2Q8WUA4 911 aaPredicted RBP9.34□□□□□ -0.91
PAAF1-212ENST00000543079 EDEM1Q92611 657 aa9.34□□□□□ -0.91
PAAF1-212ENST00000543079 AKTIPQ9H8T0 292 aa9.34□□□□□ -0.91
PAAF1-212ENST00000543079 TERF2IPQ9NYB0 399 aa9.34□□□□□ -0.91
PAAF1-212ENST00000543079 USP6P35125 1406 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 PCSK2P16519 638 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 HTRA3P83110 453 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 DDX10Q13206 875 aaKnown RBP9.33□□□□□ -0.92
PAAF1-212ENST00000543079 ZNF827Q17R98 1081 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
PAAF1-212ENST00000543079 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
PAAF1-212ENST00000543079 HDGFL2Q7Z4V5 671 aaPredicted RBP9.33□□□□□ -0.92
PAAF1-212ENST00000543079 NCAPG2Q86XI2 1143 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 JMYQ8N9B5 988 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 MEGF10Q96KG7 1140 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 PBX4Q9BYU1 374 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 RASSF4Q9H2L5 321 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 WWC3Q9ULE0 1092 aa9.33□□□□□ -0.92
PAAF1-212ENST00000543079 KTN1Q86UP2 1357 aaKnown RBP9.33□□□□□ -0.92
PAAF1-212ENST00000543079 PDGFAP04085 211 aa9.32□□□□□ -0.92
PAAF1-212ENST00000543079 MZF1P28698 734 aaPredicted RBP9.32□□□□□ -0.92
PAAF1-212ENST00000543079 CDC27P30260 824 aa9.32□□□□□ -0.92
PAAF1-212ENST00000543079 DNM1Q05193 864 aaKnown RBP9.32□□□□□ -0.92
PAAF1-212ENST00000543079 ALKBH2Q6NS38 261 aa9.32□□□□□ -0.92
PAAF1-212ENST00000543079 DZIP1LQ8IYY4 767 aaKnown RBP9.32□□□□□ -0.92
PAAF1-212ENST00000543079 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
PAAF1-212ENST00000543079 CNTN3Q9P232 1028 aa9.32□□□□□ -0.92
PAAF1-212ENST00000543079 AKAP12Q02952 1782 aa9.32□□□□□ -0.92
PAAF1-212ENST00000543079 TTC21BQ7Z4L5 1316 aa9.31□□□□□ -0.92
PAAF1-212ENST00000543079 TRPM3Q9HCF6 1732 aaPredicted RBP9.31□□□□□ -0.92
PAAF1-212ENST00000543079 F8W735 103 aaPredicted RBP9.31□□□□□ -0.92
PAAF1-212ENST00000543079 NPR3P17342 541 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms