RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 LEFTY1O75610 366 aa5.92□□□□□ -1.46
LDHB-209ENST00000542765 LIG3P49916 1009 aa5.92□□□□□ -1.46
LDHB-209ENST00000542765 PTPN11Q06124 597 aaPredicted RBP5.92□□□□□ -1.46
LDHB-209ENST00000542765 LLGL2Q6P1M3 1020 aa5.92□□□□□ -1.46
LDHB-209ENST00000542765 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
LDHB-209ENST00000542765 GAL3ST3Q96A11 431 aa5.92□□□□□ -1.46
LDHB-209ENST00000542765 FBXL18Q96ME1 805 aa5.92□□□□□ -1.46
LDHB-209ENST00000542765 MKNK2Q9HBH9 465 aa5.92□□□□□ -1.46
LDHB-209ENST00000542765 FANCGO15287 622 aa5.91□□□□□ -1.46
LDHB-209ENST00000542765 RECKO95980 971 aa5.91□□□□□ -1.46
LDHB-209ENST00000542765 OXCT1P55809 520 aa5.91□□□□□ -1.46
LDHB-209ENST00000542765 LRRC14Q15048 493 aa5.91□□□□□ -1.46
LDHB-209ENST00000542765 UBE3DQ7Z6J8 389 aa5.91□□□□□ -1.46
LDHB-209ENST00000542765 BCL7CQ8WUZ0 217 aaPredicted RBP5.91□□□□□ -1.46
LDHB-209ENST00000542765 LRRC4CQ9HCJ2 640 aa5.91□□□□□ -1.46
LDHB-209ENST00000542765 F6X3S4 739 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 VAMP1P23763 118 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 RPS26P62854 115 aaKnown RBP5.9□□□□□ -1.46
LDHB-209ENST00000542765 INPP5AQ14642 412 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 PPM1JQ5JR12 505 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 ZBTB37Q5TC79 503 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 AGMOQ6ZNB7 445 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 CYFIP1Q7L576 1253 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 SPRED2Q7Z698 418 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
LDHB-209ENST00000542765 ACSBG1Q96GR2 724 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 HEXIM2Q96MH2 286 aaKnown RBP5.9□□□□□ -1.46
LDHB-209ENST00000542765 BACH2Q9BYV9 841 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 KIAA1522Q9P206 1035 aaPredicted RBP5.9□□□□□ -1.46
LDHB-209ENST00000542765 ANGEL1Q9UNK9 670 aaKnown RBP5.9□□□□□ -1.46
LDHB-209ENST00000542765 TLR6Q9Y2C9 796 aa5.9□□□□□ -1.46
LDHB-209ENST00000542765 DCDC2CA8MYV0 355 aa5.89□□□□□ -1.47
LDHB-209ENST00000542765 RNGTTO60942 597 aaKnown RBP5.89□□□□□ -1.47
LDHB-209ENST00000542765 TFE3P19532 575 aaPredicted RBP5.89□□□□□ -1.47
LDHB-209ENST00000542765 TSNAXIP1Q2TAA8 658 aa5.89□□□□□ -1.47
LDHB-209ENST00000542765 C12orf40Q86WS4 652 aa5.89□□□□□ -1.47
LDHB-209ENST00000542765 KRTAP1-3Q8IUG1 177 aa5.89□□□□□ -1.47
LDHB-209ENST00000542765 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.89□□□□□ -1.47
LDHB-209ENST00000542765 TMEM87AQ8NBN3 555 aa5.89□□□□□ -1.47
LDHB-209ENST00000542765 PHC3Q8NDX5 983 aa5.89□□□□□ -1.47
LDHB-209ENST00000542765 TNKS2Q9H2K2 1166 aa5.89□□□□□ -1.47
LDHB-209ENST00000542765 PLAGL2Q9UPG8 496 aa5.89□□□□□ -1.47
LDHB-209ENST00000542765 PCDHB5Q9Y5E4 795 aa5.89□□□□□ -1.47
LDHB-209ENST00000542765 RLBP1P12271 317 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 ITGB5P18084 799 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 SEPT6Q14141 434 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 LRFN4Q6PJG9 635 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 ERMP1Q7Z2K6 904 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 PLD6Q8N2A8 252 aaKnown RBP5.88□□□□□ -1.47
LDHB-209ENST00000542765 FAM181AQ8N9Y4 354 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 NETO1Q8TDF5 533 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 MISP3Q96FF7 219 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 PCDHA4Q9UN74 947 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 CSADQ9Y600 493 aa5.88□□□□□ -1.47
LDHB-209ENST00000542765 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
LDHB-209ENST00000542765 LMNB1P20700 586 aa5.87□□□□□ -1.47
LDHB-209ENST00000542765 CAP2P40123 477 aa5.87□□□□□ -1.47
LDHB-209ENST00000542765 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.87□□□□□ -1.47
LDHB-209ENST00000542765 STK11IPQ8N1F8 1099 aa5.87□□□□□ -1.47
LDHB-209ENST00000542765 TOP6BLQ8N6T0 577 aa5.87□□□□□ -1.47
LDHB-209ENST00000542765 AGBL5Q8NDL9 886 aa5.87□□□□□ -1.47
LDHB-209ENST00000542765 RHOVQ96L33 236 aa5.87□□□□□ -1.47
LDHB-209ENST00000542765 COPRSQ9NQ92 184 aa5.87□□□□□ -1.47
LDHB-209ENST00000542765 VAV3Q9UKW4 847 aa5.87□□□□□ -1.47
LDHB-209ENST00000542765 SLC5A6Q9Y289 635 aa5.87□□□□□ -1.47
LDHB-209ENST00000542765 GFRA2O00451 464 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 PAX4O43316 350 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 EOMESO95936 686 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 FANCCQ00597 558 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 PRKCQQ04759 706 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 BNIP3Q12983 259 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 ZNF574Q6ZN55 896 aaPredicted RBP5.86□□□□□ -1.47
LDHB-209ENST00000542765 HS2ST1Q7LGA3 356 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 TP53INP2Q8IXH6 220 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 FLCNQ8NFG4 579 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 TMEM74Q96NL1 305 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 RSRP1Q9BUV0 290 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 WNT10AQ9GZT5 417 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 MIR1-1HGQ9H1L0 117 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 PRDM10Q9NQV6 1147 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 KBTBD4Q9NVX7 518 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 SNCAIPQ9Y6H5 919 aa5.86□□□□□ -1.47
LDHB-209ENST00000542765 CEACAM5P06731 702 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 GBP2P32456 591 aaPredicted RBP5.85□□□□□ -1.47
LDHB-209ENST00000542765 ZNF76P36508 570 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 CDK8P49336 464 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 PWP1Q13610 501 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 SLBPQ14493 270 aaKnown RBP eCLIP5.85□□□□□ -1.47
LDHB-209ENST00000542765 IFI16Q16666 785 aaKnown RBP5.85□□□□□ -1.47
LDHB-209ENST00000542765 RELL1Q8IUW5 271 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 KCT2Q8NC54 265 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 ZNF507Q8TCN5 953 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 PLPPR2Q96GM1 343 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 FBRSQ9HAH7 460 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 SSU72Q9NP77 194 aaKnown RBP5.85□□□□□ -1.47
LDHB-209ENST00000542765 GGT7Q9UJ14 662 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 SNX11Q9Y5W9 270 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 TACC3Q9Y6A5 838 aa5.85□□□□□ -1.47
LDHB-209ENST00000542765 CNTNAP4Q9C0A0 1308 aa5.84□□□□□ -1.47
LDHB-209ENST00000542765 MINDY4BA8MYZ0 360 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms