RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 GCLCP48506 637 aaPredicted RBP4.29□□□□□ -1.72
CHD4-209ENST00000542717 PUM1Q14671 1186 aaKnown RBP eCLIP4.29□□□□□ -1.721e-20■□□□□ 8.9
CHD4-209ENST00000542717 CCL14Q16627 93 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 TMEM240Q5SV17 173 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 ANO1Q5XXA6 986 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 PSRC1Q6PGN9 363 aaPredicted RBP4.29□□□□□ -1.72
CHD4-209ENST00000542717 ZNF365Q70YC5 407 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 PRRT2Q7Z6L0 340 aaPredicted RBP4.29□□□□□ -1.72
CHD4-209ENST00000542717 DZIP1LQ8IYY4 767 aaKnown RBP4.29□□□□□ -1.72
CHD4-209ENST00000542717 NKD2Q969F2 451 aaPredicted RBP4.29□□□□□ -1.72
CHD4-209ENST00000542717 FSD1Q9BTV5 496 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 UBE2ZQ9H832 354 aaPredicted RBP4.29□□□□□ -1.72
CHD4-209ENST00000542717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHD4-209ENST00000542717 PICK1Q9NRD5 415 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 MINPP1Q9UNW1 487 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 LEMD3Q9Y2U8 911 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 A0A0G2JMZ2 1700 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 COL4A6Q14031 1691 aa4.29□□□□□ -1.72
CHD4-209ENST00000542717 GAKO14976 1311 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 ZNF521Q96K83 1311 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 TMEM221A6NGB7 291 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 TRIM75PA6NK02 468 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 ZBBXA8MT70 800 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 DCDC2CA8MYV0 355 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 M0R296 226 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 TIMP1P01033 207 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 POU3F3P20264 500 aaPredicted RBP4.28□□□□□ -1.72
CHD4-209ENST00000542717 KLRK1P26718 216 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 PRKAR2BP31323 418 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 EIF4A1P60842 406 aaKnown RBP4.28□□□□□ -1.72
CHD4-209ENST00000542717 MAP2K5Q13163 448 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 PABPC4Q13310 644 aaKnown RBP eCLIP4.28□□□□□ -1.72
CHD4-209ENST00000542717 SNX17Q15036 470 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 PROSER3Q2NL68 480 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 NBPF20Q3BBV1 942 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 LEXMQ3ZCV2 418 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 NCBP3Q53F19 620 aaKnown RBP4.28□□□□□ -1.72
CHD4-209ENST00000542717 WDR78Q5VTH9 848 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 MFSD5Q6N075 450 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 EP400NLQ6ZTU2 488 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 TMEM199Q8N511 208 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 PNISRQ8TF01 805 aaKnown RBP4.28□□□□□ -1.72
CHD4-209ENST00000542717 ARNTL2Q8WYA1 636 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 APBA2Q99767 749 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 MUTYHQ9UIF7 546 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 SERPINA10Q9UK55 444 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 AGTPBP1Q9UPW5 1226 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 FAM50BQ9Y247 325 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 CFAP47Q6ZTR5 3102 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 FASNP49327 2511 aaKnown RBP4.28□□□□□ -1.72
CHD4-209ENST00000542717 KMT2BQ9UMN6 2715 aaPredicted RBP4.28□□□□□ -1.72
CHD4-209ENST00000542717 ACACBO00763 2458 aa4.28□□□□□ -1.72
CHD4-209ENST00000542717 DCHS1Q96JQ0 3298 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 NCOR2Q9Y618 2525 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 GRXCR2A6NFK2 248 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 PROB1E7EW31 1015 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 PDE8AO60658 829 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 FGBP02675 491 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 CSF2RAP15509 400 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 IRS1P35568 1242 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 IGHMBP2P38935 993 aaKnown RBP4.27□□□□□ -1.73
CHD4-209ENST00000542717 CRKP46108 304 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 FKBP1AP62942 108 aaKnown RBP4.27□□□□□ -1.73
CHD4-209ENST00000542717 ATP2B2Q01814 1243 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 PUS10Q3MIT2 529 aaKnown RBP4.27□□□□□ -1.73
CHD4-209ENST00000542717 TMEM67Q5HYA8 995 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 MFSD14BQ5SR56 506 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 TREML2Q5T2D2 321 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 C16orf59Q7L2K0 433 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 OTOP2Q7RTS6 562 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 ZNF804AQ7Z570 1209 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 BMP8AQ7Z5Y6 402 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 KIAA2013Q8IYS2 634 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 FBXL6Q8N531 539 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.27□□□□□ -1.73
CHD4-209ENST00000542717 KCNG4Q8TDN1 519 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 PHACTR3Q96KR7 559 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 HINFPQ9BQA5 517 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 PPP1R12CQ9BZL4 782 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 ANKRD2Q9GZV1 360 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 DAGLAQ9Y4D2 1042 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 PCDHA11Q9Y5I1 949 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 SLC4A7Q9Y6M7 1214 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 GPR179Q6PRD1 2367 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 RLFQ13129 1914 aa4.27□□□□□ -1.73
CHD4-209ENST00000542717 ARAP2Q8WZ64 1704 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 UTYO14607 1347 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 ZIC2O95409 532 aaPredicted RBP4.26□□□□□ -1.73
CHD4-209ENST00000542717 CA3P07451 260 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 AVPR2P30518 371 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 MAPK4P31152 587 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 CYP2C19P33261 490 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 VCPP55072 806 aaKnown RBP4.26□□□□□ -1.73
CHD4-209ENST00000542717 IRX3P78415 501 aaPredicted RBP4.26□□□□□ -1.73
CHD4-209ENST00000542717 ZP2Q05996 745 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 DMWDQ09019 674 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 FAAP100Q0VG06 881 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 TCP10Q12799 353 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 GRB10Q13322 594 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 PDIA6Q15084 440 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms