RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 TAF1DQ9H5J8 278 aaPredicted RBP9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 INCENPQ9NQS7 918 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 PDRG1Q9NUG6 133 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 SERPINB13Q9UIV8 391 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 TAOK2Q9UL54 1235 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 SCN9AQ15858 1988 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 DOCK2Q92608 1830 aa9.49□□□□□ -0.89
MRPL40P1-201ENST00000542687 DDTLA6NHG4 134 aaPredicted RBP9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 B4E1Z4 1266 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 SMIM22K7EJ46 135 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 ORC4O43929 436 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 RANBP6O60518 1105 aaKnown RBP9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 PRDM1O75626 825 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 CPA1P15085 419 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 VEGFAP15692 232 aaPredicted RBP9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 RPS6KB1P23443 525 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 CDK8P49336 464 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 EAPPQ56P03 285 aaPredicted RBP9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 C16orf86Q6ZW13 317 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 SH3BP5LQ7L8J4 393 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 ZC3H15Q8WU90 426 aaKnown RBP9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 TMEM39BQ9GZU3 492 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 DEFB129Q9H1M3 183 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 EHD4Q9H223 541 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 RRAGCQ9HB90 399 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 GGA3Q9NZ52 723 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 SWAP70Q9UH65 585 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 ASTN2O75129 1339 aaPredicted RBP9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 NEDD4P46934 1319 aa9.48□□□□□ -0.89
MRPL40P1-201ENST00000542687 MAST2Q6P0Q8 1798 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 POTECB2RU33 542 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 PRC1O43663 620 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 KDM4AO75164 1064 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 EXOSC10Q01780 885 aaKnown RBP9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 EVX2Q03828 476 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 SART3Q15020 963 aaKnown RBP9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 SULF1Q8IWU6 871 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 MB21D2Q8IYB1 491 aaPredicted RBP9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 HOOK2Q96ED9 719 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 HERC5Q9UII4 1024 aaKnown RBP9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 SCAF8Q9UPN6 1271 aaKnown RBP9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 CLEC11AQ9Y240 323 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 PPP2R3BQ9Y5P8 575 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 TACC3Q9Y6A5 838 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 PITPNM2Q9BZ72 1349 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 CNTNAP1P78357 1384 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 ATRNL1Q5VV63 1379 aa9.47□□□□□ -0.89
MRPL40P1-201ENST00000542687 ERICH2A1L162 156 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 TSPY2A6NKD2 308 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 MCM2P49736 904 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 TFAP4Q01664 338 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 GABPAQ06546 454 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 BECN1Q14457 450 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 ANKRD1Q15327 319 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 SUPT20HL1Q3ZLR7 823 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 FAM47AQ5JRC9 791 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 CHST3Q7LGC8 479 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 METTL16Q86W50 562 aaKnown RBP9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 IQCA1Q86XH1 822 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 HSCBQ8IWL3 235 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 SLC44A5Q8NCS7 719 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 SNX21Q969T3 373 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 TMEM87BQ96K49 555 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 CCDC17Q96LX7 622 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 UBAC1Q9BSL1 405 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 MTA3Q9BTC8 594 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 ALDH8A1Q9H2A2 487 aaPredicted RBP9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 ZSWIM5Q9P217 1185 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 PGAP2Q9UHJ9 254 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 WDR19Q8NEZ3 1342 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 AK9Q5TCS8 1911 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 ROBO3Q96MS0 1386 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 MYH13Q9UKX3 1938 aa9.46□□□□□ -0.9
MRPL40P1-201ENST00000542687 IFIT3O14879 490 aaKnown RBP9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 TBC1D12O60347 775 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 TSPY3P0CV98 308 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 TSPY8P0CW00 308 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 RASA1P20936 1047 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 SHMT1P34896 483 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 CERKLQ49MI3 558 aaPredicted RBP9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 CCDC178Q5BJE1 867 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 Q6ZUG5 572 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 CYB5R4Q7L1T6 521 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 MIGA2Q7L4E1 593 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 KRT26Q7Z3Y9 468 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 USP48Q86UV5 1035 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 TCEANC2Q96MN5 208 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 TEPSINQ96N21 525 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 TTC14Q96N46 770 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 LRRC2Q9BYS8 371 aa9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 DAXXQ9UER7 740 aaPredicted RBP9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 COL2A1P02458 1487 aaPredicted RBP9.45□□□□□ -0.9
MRPL40P1-201ENST00000542687 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
MRPL40P1-201ENST00000542687 MPHOSPH10O00566 681 aaKnown RBP9.44□□□□□ -0.9
MRPL40P1-201ENST00000542687 AK2P54819 239 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms